Fast Scalable Construction of (Minimal Perfect Hash) Functions

Recent advances in random linear systems on finite fields have paved the way for the construction of constant-time data structures representing static functions and minimal perfect hash functions using less space with respect to existing techniques. The main obstruction for any practical application of these results is the cubic-time Gaussian elimination required to solve these linear systems: despite they can be made very small, the computation is still too slow to be feasible. In this paper we describe in detail a number of heuristics and programming techniques to speed up the resolution of these systems by several orders of magnitude, making the overall construction competitive with the standard and widely used MWHC technique, which is based on hypergraph peeling. In particular, we introduce broadword programming techniques for fast equation manipulation and a lazy Gaussian elimination algorithm. We also describe a number of technical improvements to the data structure which further reduce space usage and improve lookup speed. Our implementation of these techniques yields a minimal perfect hash function data structure occupying 2.24 bits per element, compared to 2.68 for MWHC-based ones, and a static function data structure which reduces the multiplicative overhead from 1.23 to 1.03

On randomness in Hash functions

In the talk, we shall discuss quality measures for hash functions used in data structures and algorithms, and survey positive and negative results. (This talk is not about cryptographic hash functions.) For the analysis of algorithms involving hash functions, it is often convenient to assume the hash functions used behave fully randomly; in some cases there is no analysis known that avoids this assumption. In practice, one needs to get by with weaker hash functions that can be generated by randomized algorithms. A well-studied range of applications concern realizations of dynamic dictionaries (linear probing, chained hashing, dynamic perfect hashing, cuckoo hashing and its generalizations) or Bloom filters and their variants. A particularly successful and useful means of classification are Carter and Wegman's universal or k-wise independent classes, introduced in 1977. A natural and widely used approach to analyzing an algorithm involving hash functions is to show that it works if a sufficiently strong universal class of hash functions is used, and to substitute one of the known constructions of such classes. This invites research into the question of just how much independence in the hash functions is necessary for an algorithm to work. Some recent analyses that gave impossibility results constructed rather artificial classes that would not work; other results pointed out natural, widely used hash classes that would not work in a particular application. Only recently it was shown that under certain assumptions on some entropy present in the set of keys even 2-wise independent hash classes will lead to strong randomness properties in the hash values. The negative results show that these results may not be taken as justification for using weak hash classes indiscriminately, in particular for key sets with structure. When stronger independence properties are needed for a theoretical analysis, one may resort to classic constructions. Only in 2003 it was found out how full randomness can be simulated using only linear space overhead (which is optimal). The "split-and-share" approach can be used to justify the full randomness assumption in some situations in which full randomness is needed for the analysis to go through, like in many applications involving multiple hash functions (e.g., generalized versions of cuckoo hashing with multiple hash functions or larger bucket sizes, load balancing, Bloom filters and variants, or minimal perfect hash function constructions). For practice, efficiency considerations beyond constant factors are important. It is not hard to construct very efficient 2-wise independent classes. Using k-wise independent classes for constant k bigger than 3 has become feasible in practice only by new constructions involving tabulation. This goes together well with the quite new result that linear probing works with 5-independent hash functions. Recent developments suggest that the classification of hash function constructions by their degree of independence alone may not be adequate in some cases. Thus, one may want to analyze the behavior of specific hash classes in specific applications, circumventing the concept of k-wise independence. Several such results were recently achieved concerning hash functions that utilize tabulation. In particular if the analysis of the application involves using randomness properties in graphs and hypergraphs (generalized cuckoo hashing, also in the version with a "stash", or load balancing), a hash class combining k-wise independence with tabulation has turned out to be very powerful

A simple class of efficient compression schemes supporting local access and editing

In this paper, we study the problem of compressing a collection of sequences of variable length that allows us to efficiently add, read, or edit an arbitrary sequence without decompressing the whole data. This problem has important applications in data servers, file-editing systems, and bioinformatics. We propose a novel and practical compression scheme, which shows that, by paying a small price in storage space (3% extra storage space in our examples), we can retrieve or edit a sequence (a few hundred bits) by accessing compressed bits close to the entropy of the sequence.United States. Air Force Office of Scientific Research (Grant FA9550-11-1-0183)National Science Foundation (U.S.) (Grant CCF-1017772

ENGINEERING COMPRESSED STATIC FUNCTIONS AND MINIMAL PERFECT HASH FUNCTIONS

\emph{Static functions} are data structures meant to store arbitrary mappings from finite sets to integers; that is, given universe of items $U$, a set of $n \in \mathbb{N}$ pairs $(k_i,v_i)$ where $k_i \in S \subset U, |S|=n$, and $v_i \in \{0, 1, \ldots, m-1\} , m \in \mathbb{N}$, a static function will retrieve $v_i$ given $k_i$ (usually, in constant time). When every key is mapped into a different value this function is called \emph{perfect hash function} and when $n=m$ the data structure yields an injective numbering $S\to \lbrace0,1, \ldots n-1 \rbrace$; this mapping is called a \emph{minimal perfect hash function}. Big data brought back one of the most critical challenges that computer scientists have been tackling during the last fifty years, that is, analyzing big amounts of data that do not fit in main memory. While for small keysets these mappings can be easily implemented using hash tables, this solution does not scale well for bigger sets. Static functions and MPHFs break the information-theoretical lower bound of storing the set $S$ because they are allowed to return \emph{any} value if the queried key is not in the original keyset. The classical constructions technique for static functions can achieve just $O(nb)$ bits space, where $b=\log(m)$, and the one for MPHFs $O(n)$ bits of space (always with constant access time). All these features make static functions and MPHFs powerful techniques when handling, for instance, large sets of strings, and they are essential building blocks of space-efficient data structures such as (compressed) full-text indexes, monotone MPHFs, Bloom filter-like data structures, and prefix-search data structures. The biggest challenge of this construction technique involves lowering the multiplicative constants hidden inside the asymptotic space bounds while keeping feasible construction times. In this thesis, we take advantage of the recent result in random linear systems theory regarding the ratio between the number of variables and number of the equations, and in perfect hash data structures, to achieve practical static functions with the lowest space bounds so far, and construction time comparable with widely used techniques. The new results, however, require solving linear systems that require more than a simple triangulation process, as it happens in current state-of-the-art solutions. The main challenge in making such structures usable is mitigating the cubic running time of Gaussian elimination at construction time. To this purpose, we introduce novel techniques based on \emph{broadword programming} and a heuristic derived from \emph{structured Gaussian elimination}. We obtained data structures that are significantly smaller than commonly used hypergraph-based constructions while maintaining or improving the lookup times and providing still feasible construction.We then apply these improvements to another kind of structures: \emph{compressed static hash functions}. The theoretical construction technique for this kind of data structure uses prefix-free codes with variable length to encode the set of values. Adopting this solution, we can reduce the\n space usage of each element to (essentially) the entropy of the list of output values of the function.Indeed, we need to solve an even bigger linear system of equations, and the time required to build the structure increases. In this thesis, we present the first engineered implementation of compressed hash functions. For example, we were able to store a function with geometrically distributed output, with parameter $p=0.5$in just $2.28$ bit per key, independently of the key set, with a construction time double with respect to that of a state-of-the-art non-compressed function, which requires $\approx\log \log n$ bits per key, where $n$ is the number of keys, and similar lookup time. We can also store a function with an output distributed following a Zipfian distribution with parameter $s=2$ and $N= 10^6$ in just $2.75$ bits per key, whereas a non-compressed function would require more than $20$, with a threefold increase in construction time and significantly faster lookups

Constructing Minimal Perfect Hash Functions Using SAT Technology

Minimal perfect hash functions (MPHFs) are used to provide efficient access to values of large dictionaries (sets of key-value pairs). Discovering new algorithms for building MPHFs is an area of active research, especially from the perspective of storage efficiency. The information-theoretic limit for MPHFs is 1/(ln 2) or roughly 1.44 bits per key. The current best practical algorithms range between 2 and 4 bits per key. In this article, we propose two SAT-based constructions of MPHFs. Our first construction yields MPHFs near the information-theoretic limit. For this construction, current state-of-the-art SAT solvers can handle instances where the dictionaries contain up to 40 elements, thereby outperforming the existing (brute-force) methods. Our second construction uses XOR-SAT filters to realize a practical approach with long-term storage of approximately 1.83 bits per key.Comment: Accepted for AAAI 202

Deterministic and efficient minimal perfect hashing schemes

Neste trabalho apresentamos versões determinísticas para os esquemasde hashing de Botelho, Kohayakawa e Ziviani (2005) e por Botelho, Pagh e Ziviani(2007). Também respondemos a um problema deixado em aberto no primeiro dostrabalhos, relacionado à prova da corretude e à análise de complexidade do esquemapor eles proposto. As versões determinísticas desenvolvidas foram implementadase testadas sobre conjuntos de dados com até 25.000.000 de chaves, e os resultadosverificados se mostraram equivalentes aos dos algoritmos aleatorizados originais

SicHash -- Small Irregular Cuckoo Tables for Perfect Hashing

A Perfect Hash Function (PHF) is a hash function that has no collisions on a given input set. PHFs can be used for space efficient storage of data in an array, or for determining a compact representative of each object in the set. In this paper, we present the PHF construction algorithm SicHash - Small Irregular Cuckoo Tables for Perfect Hashing. At its core, SicHash uses a known technique: It places objects in a cuckoo hash table and then stores the final hash function choice of each object in a retrieval data structure. We combine the idea with irregular cuckoo hashing, where each object has a different number of hash functions. Additionally, we use many small tables that we overload beyond their asymptotic maximum load factor. The most space efficient competitors often use brute force methods to determine the PHFs. SicHash provides a more direct construction algorithm that only rarely needs to recompute parts. Our implementation improves the state of the art in terms of space usage versus construction time for a wide range of configurations. At the same time, it provides very fast queries