Seabed mapping in coastal shallow waters using high resolution multispectral and hyperspectral imagery

Coastal ecosystems experience multiple anthropogenic and climate change pressures. To monitor the variability of the benthic habitats in shallow waters, the implementation of effective strategies is required to support coastal planning. In this context, high-resolution remote sensing data can be of fundamental importance to generate precise seabed maps in coastal shallow water areas. In this work, satellite and airborne multispectral and hyperspectral imagery were used to map benthic habitats in a complex ecosystem. In it, submerged green aquatic vegetation meadows have low density, are located at depths up to 20 m, and the sea surface is regularly affected by persistent local winds. A robust mapping methodology has been identified after a comprehensive analysis of different corrections, feature extraction, and classification approaches. In particular, atmospheric, sunglint, and water column corrections were tested. In addition, to increase the mapping accuracy, we assessed the use of derived information from rotation transforms, texture parameters, and abundance maps produced by linear unmixing algorithms. Finally, maximum likelihood (ML), spectral angle mapper (SAM), and support vector machine (SVM) classification algorithms were considered at the pixel and object levels. In summary, a complete processing methodology was implemented, and results demonstrate the better performance of SVM but the higher robustness of ML to the nature of information and the number of bands considered. Hyperspectral data increases the overall accuracy with respect to the multispectral bands (4.7% for ML and 9.5% for SVM) but the inclusion of additional features, in general, did not significantly improve the seabed map quality.Peer ReviewedPostprint (published version

Remote sensing technologies for the assessment of marine and coastal ecosystems

Abstract This chapter reviews the Remote Sensing (RS) technologies that are particularly appropriate for marine and coastal ecosystem research and management. RS techniques are used to perform analysis of water quality in coastal water bodies; to identify, characterize and analyze river plumes; to extract estuarine/coastal sandy bodies; to identify beach features/patterns; and to evaluate the changes and integrity (health) of the coastal lagoon habitats. For effective management of these ecosystems, it is essential to have satellite data available and complementary accurate information about the current state of the coastal regions, in addition to well-informed forecasts about its future state. In recent years, the use of space, air and ground-based RS strategies has allowed for the rapid data collection, Image processing (Pixel-Based and Object-Based Image Analysis (OBIA) classification) and dissemination of such information to reduce vulnerability to natural hazards, anthropic pressures, and to monitoring essential ecological processes, life support systems and biological diversityinfo:eu-repo/semantics/submittedVersio

The Assessment of Land Degradation and Desertification in Mexico: Mapping Regional Trend Indicators with Satellite Data

Understanding the patterns of land degradation and desertification to develop mitigation strategies requires identification of methods for accurate and spatially explicit assessment and monitoring. Remote sensing data offer the possibility to develop strategies that outline degradation and desertification. The free access policy on satellite imagery enables a new pathway to measure, assess, and monitor land degradation using indicators derived from multispectral satellite data. This chapter seeks to explore a methodology for land degradation and desertification assessment and monitoring, based on freely available multispectral satellite data. The method identifies net primary productivity (NPP) and canopy cover (CC) as indicators of degradation. The trajectories of these indicators show patterns and trends over time. The methodological development presented here is intended to be a tool for regional landscape monitoring and assessment, enabling the formulation of corrective action plans. This methodology was tested in a semi-deciduous ecosystem in the southeast of Mexico

Unmanned Aerial Vehicles (UAVs) in environmental biology: A Review

Acquiring information about the environment is a key step during each study in the field of environmental biology at different levels, from an individual species to community and biome. However, obtaining information about the environment is frequently difficult because of, for example, the phenological timing, spatial distribution of a species or limited accessibility of a particular area for the field survey. Moreover, remote sensing technology, which enables the observation of the Earth’s surface and is currently very common in environmental research, has many limitations such as insufficient spatial, spectral and temporal resolution and a high cost of data acquisition. Since the 1990s, researchers have been exploring the potential of different types of unmanned aerial vehicles (UAVs) for monitoring Earth’s surface. The present study reviews recent scientific literature dealing with the use of UAV in environmental biology. Amongst numerous papers, short communications and conference abstracts, we selected 110 original studies of how UAVs can be used in environmental biology and which organisms can be studied in this manner. Most of these studies concerned the use of UAV to measure the vegetation parameters such as crown height, volume, number of individuals (14 studies) and quantification of the spatio-temporal dynamics of vegetation changes (12 studies). UAVs were also frequently applied to count birds and mammals, especially those living in the water. Generally, the analytical part of the present study was divided into following sections: (1) detecting, assessing and predicting threats on vegetation, (2) measuring the biophysical parameters of vegetation, (3) quantifying the dynamics of changes in plants and habitats and (4) population and behaviour studies of animals. At the end, we also synthesised all the information showing, amongst others, the advances in environmental biology because of UAV application. Considering that 33% of studies found and included in this review were published in 2017 and 2018, it is expected that the number and variety of applications of UAVs in environmental biology will increase in the future

Posidonia Oceanica habitat mapping in shallow coastal waters along Losinj Island, Croatia using Geoeye-1 multispectral imagery

Seagrasses are important components of marine ecosystem. They are a primary food source for many organisms and provide shelter and nursery areas for many more. Also they stabilize sediments and act as a natural barrier against coastal erosion. But despite their valuable rule, Seagrasses are facing large threats because of human development. The stresses caused by human activities like trawling and anchoring, seabed mining, gas or mineral exploration and production, industrial chemical waste, agricultural run-off and coastal development results in a worldwide decline of seagrass meadows coverage. In this thesis, a study was carried out using Geoeye-1 satellite data acquired on July and August 2011 to extract bottom type features, i.e. seagrass (Posidonia Oceanica), sand and rock in shallow coastal waters of Losinj Island, Croatia. To conduct the study, atmospheric correction, glint removal and water column correct were done to remove the noise from the seabed reflectance but due to some quality problems (sensor calibration) with the imagery dataset prevented us to get satisfactory results from glint removal and water column correction. These techniques are based on empirical models among different band pairs and in the case of a problem in making an accurate reflectance values, their result would be unreliable. So it was decided to perform a principle component analysis to improve the spectral separability of desired classes. Then a hard supervised classification was performed to identify the spectral clusters and label them based on the training phase of the classification algorithm. But before running the classifier to compensate the attenuation effect of water body, it was decided to consider each training sample as a separate class and afterwards reclassify the results into our primary classes. At the end of the classification result were edited using a majority filter to reduce the salt and pepper effect of the classification results and the accuracy of the classification was calculated for each scene. Afterwards a mosaic was produced from the classification results. The overall accuracy of the mosaic and its kappa coefficient was calculated as 80% and 0.7 respectively which proved that the classification was successful and Geoeye-1 imagery can be used reliably to identify the extent of seagrass community in a fast and cost-effective way.Seagrasses are important components of marine ecosystem. They are a primary food source for many organisms and provide shelter and nursery areas for many more. Also they stabilize sediments and act as a natural barrier against coastal erosion. But despite their valuable rule, Seagrasses are facing large threats because of human development. The stresses caused by human activities like trawling and anchoring, seabed mining, gas or mineral exploration and production, industrial chemical waste, agricultural run-off and coastal development results in a worldwide decline of seagrass meadows coverage. In this thesis, a study was carried out using Geoeye-1 satellite data acquired on July and August 2011 to extract bottom type features, i.e. seagrass (Posidonia Oceanica), sand and rock in shallow coastal waters of Losinj Island, Croatia. To conduct the study, atmospheric correction, glint removal and water column correction were done to remove the noise from the seabed reflectance but due to some quality problems with the imagery dataset prevented us to get satisfactory results from the statistical analysis; it was decided to perform a principle component analysis (PCA) to improve the spectral separability of desired classes. Then a hard supervised classification was performed to identify the spectral clusters and label them based on the training phase of the classification algorithm. But before running the classifier to compensate the attenuation effect of water body, it was decided to consider each training sample as a separate class and afterwards reclassify the results into our primary classes. At end the classification result were edited using a majority and the accuracy of the classification was calculated for each scene. Afterwards a mosaic was produced from the classification results. The overall accuracy of the mosaic and its kappa coefficient was calculated as 80% and 0.7 respectively which proved that the classification was successful and Geoeye-1 imagery can be used reliably to identify the extent of seagrass community in a fast and cost-effective way

A Comparison of Spectral Angle Mapper and Artificial Neural Network Classifiers Combined with Landsat TM Imagery Analysis for Obtaining Burnt Area Mapping

Satellite remote sensing, with its unique synoptic coverage capabilities, can provide accurate and immediately valuable information on fire analysis and post-fire assessment, including estimation of burnt areas. In this study the potential for burnt area mapping of the combined use of Artificial Neural Network (ANN) and Spectral Angle Mapper (SAM) classifiers with Landsat TM satellite imagery was evaluated in a Mediterranean setting. As a case study one of the most catastrophic forest fires, which occurred near the capital of Greece during the summer of 2007, was used. The accuracy of the two algorithms in delineating the burnt area from the Landsat TM imagery, acquired shortly after the fire suppression, was determined by the classification accuracy results of the produced thematic maps. In addition, the derived burnt area estimates from the two classifiers were compared with independent estimates available for the study region, obtained from the analysis of higher spatial resolution satellite data. In terms of the overall classification accuracy, ANN outperformed (overall accuracy 90.29%, Kappa coefficient 0.878) the SAM classifier (overall accuracy 83.82%, Kappa coefficient 0.795). Total burnt area estimates from the two classifiers were found also to be in close agreement with the other available estimates for the study region, with a mean absolute percentage difference of ∼1% for ANN and ∼6.5% for SAM. The study demonstrates the potential of the examined here algorithms in detecting burnt areas in a typical Mediterranean setting

Review of the use of remote sensing for monitoring wildfire risk conditions to support fire risk assessment in protected areas

Fire risk assessment is one of the most important components in the management of fire that offers the framework for monitoring fire risk conditions. Whilst monitoring fire risk conditions commonly revolved around field data, Remote Sensing (RS) plays key role in quantifying and monitoring fire risk indicators. This study presents a review of remote sensing data and techniques for fire risk monitoring and assessment with a particular emphasis on its implications for wildfire risk mapping in protected areas. Firstly, we concentrate on RS derived variables employed to monitor fire risk conditions for fire risk assessment. Thereafter, an evaluation of the prominent RS platforms such as Broadband, Hyperspectral and Active sensors that have been utilized for wildfire risk assessment. Furthermore, we demonstrate the effectiveness in obtaining information that has operational use or immediate potentials for operational application in protected areas (PAs). RS techniques that involve extraction of landscape information from imagery were summarised. The review concludes that in practice, fire risk assessment that consider all variables/indicators that influence fire risk is impossible to establish, however it is imperative to incorporate indicators or variables of very high heterogeneous and “multi-sensoral or multivariate fire risk index approach for fire risk assessment in PA.Keywords: Protected Areas, Fire Risk conditions; Remote Sensing, Wildfire risk assessmen

Enhancing the usability of Satellite Earth Observations through Data Driven Models. An application to Sea Water Quality

Earth Observation from satellites has the potential to provide comprehensive, rapid and inexpensive information about land and water bodies. Marine monitoring could gain in effectiveness if integrated with approaches that are able to collect data from wide geographic areas, such as satellite observation. Integrated with in situ measurements, satellite observations enable to extend the punctual information of sampling campaigns to a synoptic view, increase the spatial and temporal coverage, and thus increase the representativeness of the natural diversity of the monitored water bodies, their inter-annual variability and water quality trends, providing information to support EU Member States’ action plans. Turbidity is one of the optically active water quality parameters that can be derived from satellite data, and is one of the environmental indicator considered by EU directives monitoring programmes. Turbidity is a visual property of water, related to the amount of light scattered by particles in water, and it can act as simple and convenient indirect measure of the concentration of suspended solids and other particulate material. A review of the state-of-the-art shows that most traditional methods to estimate turbidity from optical satellite images are based on semi-empirical models relying on few spectral bands. The choice of the most suitable bands to be used is often site and season specific, as it is related to the type and concentration of suspended particles. When investigating wide areas or long time series that include different optical water types, the application of machine learning algorithms seems to be promising due to their flexibility, responding to the need of a model that can adapt to varying water conditions with smooth transition, and their ability to exploit the wealth of spectral information. Moreover, machine learning models have shown to be less affected by atmospheric and other background factors. Atmospheric correction for water leaving reflectance, in fact, still remains one of the major challenges in aquatic remote sensing. The use of machine learning for remotely sensed water quality estimation has spread in recent years thanks to the advances in algorithm development, computing power, and availability of higher spatial resolution data. Among all existing algorithms, the choice of the complexity of the model derives from the nature and number of available data. The present study explores the use of Sentinel-2 MultiSpectral Instrument (MSI) Level-1C Top of Atmosphere spectral radiance to derive water turbidity, through application of a Polynomial Kernel Regularized Least Squares regression. This algorithms is characterized by a simple model structure, good generalization, global optimal solution, especially suitable for non-linear and high dimension problems. The study area is located in the North Tyrrhenian Sea (Italy), covering a coastline of about 100 km, characterized by a varied shoreline, embracing environments worthy of protection and valuable biodiversity, but also relevant ports, and three main river flow and sediment discharge. The coastal environment in this area has been monitored since 2001, according to the 2000/60/EC Water Framework Directive, and in 2008 EU Marine Strategy Framework Directive 2008/56/EC further strengthened the investigation in the area. A dataset of combination of turbidity measurements, expressed in nephelometric turbidity units (NTU), and values of the 13 spectral bands in the pixel corresponding to the sample location was used to calibrate and validate the model. The developed turbidity model shows good agreement of the estimated satellite-derived surface turbidity with the measured one, confirming that the use of ML techniques allows to reach a good accuracy in turbidity estimation from satellite Top of Atmosphere reflectance. Comparison between turbidity estimates obtained from the model with turbidity data from Copernicus CMEMS dataset named ’Mediterranean Sea, Bio-Geo-Chemical, L3, daily observation’, which was used as benchmark, produced consistent results. A band importance analysis revealed the contribution of the different spectral bands and the main role of the red-edge range. Finally, turbidity maps from satellite imagery were produced for the study area, showing the ability of the model to catch extreme events and, overall, how it represents an important tool to improve our understanding of the complex factors that influence water quality in our oceans

Ocean remote sensing techniques and applications: a review (Part II)

As discussed in the first part of this review paper, Remote Sensing (RS) systems are great tools to study various oceanographic parameters. Part I of this study described different passive and active RS systems and six applications of RS in ocean studies, including Ocean Surface Wind (OSW), Ocean Surface Current (OSC), Ocean Wave Height (OWH), Sea Level (SL), Ocean Tide (OT), and Ship Detection (SD). In Part II, the remaining nine important applications of RS systems for ocean environments, including Iceberg, Sea Ice (SI), Sea Surface temperature (SST), Ocean Surface Salinity (OSS), Ocean Color (OC), Ocean Chlorophyll (OCh), Ocean Oil Spill (OOS), Underwater Ocean, and Fishery are comprehensively reviewed and discussed. For each application, the applicable RS systems, their advantages and disadvantages, various RS and Machine Learning (ML) techniques, and several case studies are discussed.Peer ReviewedPostprint (published version