Circumpolar connections between Antarctic krill (Euphausia superba Dana) populations: investigating the roles of ocean and sea ice transport

Antarctic krill, Euphausia superba Dana, has a heterogeneous circumpolar distribution in the Southern Ocean. Krill have a close association with sea ice which provides access to a critical food source and shelter, particularly in the early life stages. Advective modelling of transport pathways of krill have until now been on regional scales and have not taken explicit account of sea ice. Here we present Lagrangian modelling studies at the circumpolar scale that include interaction with sea ice. The advection scheme uses ocean velocity output from the Ocean Circulation and Climate Advanced Modelling (OCCAM) project model together with satellite-derived sea ice motion vectors to examine the potential roles of the ocean and sea ice in maintaining the observed circumpolar krill distribution. We show that the Antarctic Coastal Current is likely to be important in generating the large-scale distribution and that sea ice motion can substantially modify the ocean transport pathways, enhancing retention or dispersal depending upon location. Within the major krill region of the Scotia Sea, the effect of temporal variability in both the ocean and sea ice velocity fields is examined. Variability in sea ice motion increases variability of influx to South Georgia, at times concentrating the influx into pulses of arrival. This variability has implications for the ecosystem around the island. The inclusion of sea ice motion leads to the identification of source regions for the South Georgia krill populations additional to those identified when only ocean motion is considered. This study indicates that the circumpolar oceanic circulation and interaction with sea ice is important in determining the large-scale distribution of krill and its associated variability

Classification of Southern Ocean krill and icefish echoes using random forests

Acknowledgements The authors thank the crews, fishers, and scientists who conducted the various surveys from which data were obtained. This work was supported by the Government of South Georgia and South Sandwich Islands. Additional logistical support provided by The South Atlantic Environmental Research Institute, with thanks to Paul Brickle. PF receives funding from the MASTS pooling initiative (TheMarine Alliance for Science and Technology for Scotland), and their support is gratefully acknowledged. MASTS is funded by the Scottish Funding Council (grant reference HR09011) and contributing institutions. SF is funded by the Natural Environment Research Council, and data were provided from the British Antarctic Survey Ecosystems Long-term Monitoring and Surveys programme as part of the BAS Polar Science for Planet Earth Programme. The authors also thank the anonymous referees for their helpful suggestions on an earlier version of this manuscript.Peer reviewedPostprin

Setting a precautionary catch limit for Antarctic krill

A revised precautionary catch limit for Antarctic krill (Euphausia superba) in the Scotia Sea of 4 million tons was recently adopted by the Commission for the Conservation of Antarctic Marine Living Resources (CCAMLR). The limit was based on a total biomass of 44.3 million tons, as estimated from an acoustic and net survey of krill across the Scotia Sea sector of the Southern Ocean, and a harvest rate of 9.1%, as determined from an analysis of the risks of exceeding defined conservation criteria. We caution, however, that before the fishery can expand to the 4-inillion-ton level it will be necessary to establish mechanisms to avoid concentration of fishing effort, particularly in proximity to colonies of land-breeding krill predators, and to consider the effects of krill immigrating into the region from multiple sources

KrillDB: A de novo transcriptome database for the Antarctic krill (Euphausia superba)

© 2017 Sales et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Antarctic krill (Euphausia superba) is a key species in the Southern Ocean with an estimated biomass between 100 and 500 million tonnes. Changes in krill population viability would have catastrophic effect on the Antarctic ecosystem. One looming threat due to elevated levels of anthropogenic atmospheric carbon dioxide (CO2) is ocean acidification (lowering of sea water pH by CO2 dissolving into the oceans). The genetics of Antarctic krill has long been of scientific interest for both for the analysis of population structure and analysis of functional genetics. However, the genetic resources available for the species are relatively modest. We have developed the most advanced genetic database on Euphausia superba, KrillDB, which includes comprehensive data sets of former and present transcriptome projects. In particular, we have built a de novo transcriptome assembly using more than 360 million Illumina sequence reads generated from larval krill including individuals subjected to different CO2levels. The database gives access to: 1) the full list of assembled genes and transcripts; 2) their level of similarity to transcripts and proteins from other species; 3) the predicted protein domains contained within each transcript; 4) their predicted GO terms; 5) the level of expression of each transcript in the different larval stages and CO2treatments. All references to external entities (sequences, domains, GO terms) are equipped with a link to the appropriate source database. Moreover, the software implements a full-text search engine that makes it possible to submit free-form queries. KrillDB represents the first largescale attempt at classifying and annotating the full krill transcriptome. For this reason, we believe it will constitute a cornerstone of future approaches devoted to physiological and molecular study of this key species in the Southern Ocean food web

The application of optical coherence tomography to image subsurface tissue structure of Antarctic krill Euphausia superba

Many small open ocean animals, such as Antarctic krill, are an important part of marine ecosystems. To discover what will happen to animals such as krill in a changing ocean, experiments are run in aquaria where conditions can be controlled to simulate water characteristics predicted to occur in the future. The response of individual animals to changing water conditions can be hard to observe, and with current observation techniques it is very difficult to follow the progress of an individual animal through its life. Optical coherence tomography (OCT) is an optical imaging technique that allows images at high resolution to be obtained from depths up to a few millimeters inside biological specimens. It is compatible with in vivo imaging and can be used repeatedly on the same specimens. In this work, we show how OCT may be applied to post mortem krill samples and how important physiological data such as shell thickness and estimates of organ volume can be obtained. Using OCT we find an average value for the thickness of krill exoskeleton to be (30±4) µm along a 1 cm length of the animal body. We also show that the technique may be used to provide detailed imagery of the internal structure of a pleopod joint and provide an estimate for the heart volume of (0.73±0.03) mm3

Antarctic krill Euphausia superba: spatial distribution, abundance, and management of fisheries in a changing climate

Antarctic krill Euphausia superba, a keystone species in the Southern Ocean, is highly relevant for studying effects of climate-related shifts on management systems. Krill provides a key link between primary producers and higher trophic levels and supports the largest regional fishery. Any major perturbation in the krill population would have severe ecological and economic ramifications. We review the literature to determine how climate change, in concert with other environmental changes, alters krill habitat, affects spatial distribution/abundance, and impacts fisheries management. Findings recently reported on the effects of climate change on krill distribution and abundance are inconsistent, however, raising questions regarding methods used to detect changes in density and biomass. One recent study reported a sharp decline in krill densities near their northern limit, accompanied by a poleward contraction in distribution in the Southwest Atlantic sector. Another recent study found no evidence of long-term decline in krill density or biomass and reported no evidence of a poleward shift in distribution. Moreover, with predicted decreases in phytoplankton production, vertical foraging migrations to the seabed may become more frequent, also impacting krill production and harvesting. Potentially cumulative impacts of climate change further compound the management challenge faced by CCAMLR, the organization responsible for conservation of Antarctic marine living resources: to detect changes in the abundance, distribution, and reproductive performance of krill and krill-dependent predator stocks and to respond to such change by adjusting its conservation measures. Based on CCAMLR reports and documents, we review the institutional framework, outline how climate change has been addressed within this organization, and examine the prospects for further advances toward ecosystem risk assessment and an adaptive management system.publishedVersio

Restricted regions of enhanced growth of Antarctic krill in the circumpolar Southern Ocean

Food webs in high-latitude oceans are dominated by relatively few species. Future ocean and sea-ice changes affecting the distribution of such species will impact the structure and functioning of whole ecosystems. Antarctic krill (Euphausia superba) is a key species in Southern Ocean food webs, but there is little understanding of the factors influencing its success throughout much of the ocean. The capacity of a habitat to maintain growth will be crucial and here we use an empirical relationship of growth rate to assess seasonal spatial variability. Over much of the ocean, potential for growth is limited, with three restricted oceanic regions where seasonal conditions permit high growth rates, and only a few areas around the Scotia Sea and Antarctic Peninsula suitable for growth of the largest krill (>60 mm). Our study demonstrates that projections of impacts of future change need to account for spatial and seasonal variability of key ecological processes within ocean ecosystems