The role of flood wave superposition in the severity of large floods

Abstract. The severity of floods is shaped not only by event- and catchment-specific characteristics but also depends on the river network configuration. At the confluence of relevant tributaries with the main river, flood event characteristics may change depending on the magnitude and temporal match of flood waves. This superposition of flood waves may potentially increase the flood severity downstream in the main river. However, this aspect has not been analysed for a large set of river confluences to date. To fill this gap, the role of flood wave superposition in the flood severity at downstream gauges is investigated in four large river basins in Germany and Austria (the Elbe, the Danube, the Rhine and the Weser). A novel methodological approach to analyse flood wave superposition is presented and applied to mean daily discharge data from 37 triple points. A triple point consists of three gauges: one in the tributary as well as one upstream and downstream of the confluence with the main river respectively. At the triple points, differences and similarities in flood wave characteristics between the main river and the tributary are analysed in terms of the temporal match and the magnitudes of flood peaks. At many of the confluences analysed, the tributary peaks consistently arrive earlier than the main river peaks, although high variability in the time lag is generally detected. No large differences in temporal matching are detected for floods of different magnitudes. In the majority of cases, the largest floods at the downstream gauge do not occur due to perfect temporal match between the tributary and the main river. In terms of spatial variability, the impact of flood wave superposition is site-specific. Characteristic patterns of flood wave superposition are detected for flood peaks in the Danube River, where peak discharges largely increase due to inflow from alpine tributaries. Overall, we conclude that the superposition of flood waves is not the driving factor behind flood peak severity at the major confluences in Germany; however, a few confluences show the potential for strong flood magnifications if a temporal shift in flood waves was to occur

Photoinhibition under drought and high light loads in New Zealand's divaricate shrubs

A question that has plagued New Zealand botanists for many years is the occurrence of the divaricate growth form in several different plant families, and what selection pressure could have led to such parallel evolution. One prominent theory is that the divaricate habit is an adaptation to climatic extremes. This study aims to test if the 'self-shading' growth form of divaricates protects their internal leaves from photoinhibition under physiological drought and high irradiance. By being able to forego the costs of maintaining photoprotective mechanisms, they should have greater carbon gain than their non-divaricate congeners under these conditions. To test if divaricates are protected from the detrimental effects of photoinhibition, the water potentials, pigment and vitamin E concentrations, and photosynthetic rates of two divaricates species in their natural habitat were measured. Additionally, these parameters were recorded for the same divaricate species and their non-divaricate congeners under glasshouse conditions. In the field there were clear differences in several key parameters between divaricates under different levels of irradiance and water availability, and in most cases there was clear evidence of photoinbition. In the glasshouse, the maximum photosynthetic rates were significantly higher in divaricate leaves than in non-divaricate leaves, but there were no clear differences in the avoidance of photoinhibition between divaricates and non-divaricates. Interestingly, more pronounced responses to the different treatments were observed between genera than between the growth forms in the field and glasshouse experiments. The presence of photoinhibition and photoprotective mechanisms in divaricate leaves does not support the theory that the divaricate habit evolved as a physiological response to extreme climate conditions. The absence of a strong difference in the amount of photoinhibition between divariacte and non-divaricate congeners mean that high irradiance and drought stress are unlikely to have been a key factor in the evolution of the divaricate habit. That the within genus physiologies are more similar than within the growth forms would indicate that the divaricate habit possibly evolved after the evolution of the physiological responses of the genera

Structure of the silicon vacancy in 6H-SiC after annealing identified as the carbon vacancy–carbon antisite pair

We investigated radiation-induced defects in neutron-irradiated and subsequently annealed 6H-silicon carbide (SiC) with electron paramagnetic resonance (EPR), the magnetic circular dichroism of the absorption (MCDA), and MCDA-detected EPR (MCDA-EPR). In samples annealed beyond the annealing temperature of the isolated silicon vacancy we observed photoinduced EPR spectra of spin S=1 centers that occur in orientations expected for nearest neighbor pair defects. EPR spectra of the defect on the three inequivalent lattice sites were resolved and attributed to optical transitions between photon energies of 999 and 1075 meV by MCDA-EPR. The resolved hyperfine structure indicates the presence of one single carbon nucleus and several silicon ligand nuclei. These experimental findings are interpreted with help of total energy and spin density data obtained from the standard local-spin density approximation of the density-functional theory, using relaxed defect geometries obtained from the self-consistent charge density-functional theory based tight binding scheme. We have checked several defect models of which only the photoexcited spin triplet state of the carbon antisite–carbon vacancy pair (CSi-VC) in the doubly positive charge state can explain all experimental findings. We propose that the (CSi-VC) defect is formed from the isolated silicon vacancy as an annealing product by the movement of a carbon neighbor into the vacancy

Using ecological and field survey data to establish a national list of the wild bee pollinators of crops

The importance of wild bees for crop pollination is well established, but less is known about which species contribute to service delivery to inform agricultural management, monitoring and conservation. Using sites in Great Britain as a case study, we use a novel qualitative approach combining ecological information and field survey data to establish a national list of crop pollinating bees for four economically important crops (apple, field bean, oilseed rape and strawberry). A traits data base was used to establish potential pollinators, and combined with field data to identify both dominant crop flower visiting bee species and other species that could be important crop pollinators, but which are not presently sampled in large numbers on crops flowers. Whilst we found evidence that a small number of common, generalist species make a disproportionate contribution to flower visits, many more species were identified as potential pollinators, including rare and specialist species. Furthermore, we found evidence of substantial variation in the bee communities of different crops. Establishing a national list of crop pollinators is important for practitioners and policy makers, allowing targeted management approaches for improved ecosystem services, conservation and species monitoring. Data can be used to make recommendations about how pollinator diversity could be promoted in agricultural landscapes. Our results suggest agri-environment schemes need to support a higher diversity of species than at present, notably of solitary bees. Management would also benefit from targeting specific species to enhance crop pollination services to particular crops. Whilst our study is focused upon Great Britain, our methodology can easily be applied to other countries, crops and groups of pollinating insects.LH was funded by NERC QMEE CDT. EJB was funded by a BBSRC Ph.D. studentship under grant BB/F016581/1. LB was was supported by the Scholarship Program of the German Federal Environmental Foundation (Deutsche Bundesstiftung Umwelt, DBU, AZ 20014/302). AJC was funded by the BBSRC and Syngenta UK as part of a case award Ph.D. (grant no. 1518739). AE was funded by the Swiss National Science Foundation (grant number 405940-115642). DG and A-MK were funded by grant PCIN2014-145-C02-02 (MinECo; EcoFruit project BiodivERsA-FACCE2014-74). MG was supported by Establishing a UK Pollinator Monitoring and Research Partnership (PMRP) a collaborative project funded by Defra, the Welsh and Scottish Governments, JNCC and project partners’. GAdG was funded via research projects BO-11-011.01-051 and BO-43-011.06-007, commissioned by the Dutch Ministry of Agriculture, Nature and Food Quality. DK was funded by the Dutch Ministry of Economic Affairs (BO-11-011.01-011). AK-H was funded by the NKFIH project (FK123813), the Bolyai János Fellowship of the MTA, the ÚNKP-19-4-SZIE-3 New National Excellence Program of the Ministry for Innovation and Technology, and together with RF by the Hungarian Scientific Research Fund OTKA 101940. MM was funded by Waitrose & Partners, Fruition PO, and the University of Worcester. MM was funded by grant INIA-RTA2013-00139-C03-01 (MinECo and FEDER). BBP and RFS were funded by the UK Natural Environment Research Council as part of Wessex BESS (ref. NE/J014680/1). NJV was funded by the Walloon Region (Belgium) Direction générale opérationnelle de l’Agriculture, des Ressources naturelles et de l’Environnement (DGO3) for the "Modèle permaculturel" project on biodiversity in micro-farms, FNRS/FWO joint programme EOS — Excellence Of Science CliPS: Climate change and its impact on Pollination Services (project 30947854)". CW was funded by the Deutsche Forschungsgemeinschaft (DFG) (Project number 405945293). BW was funded by the Natural Environment Research Council (NERC) under research programme NE/N018125/1 ASSIST – Achieving Sustainable Agricultural Systems www.assist.ceh.ac.uk. TB and TO are supported by BBSRC, NERC, ESRC and the Scottish Government under the Global Food Security Programme (Grant BB/R00580X/1)

Coenzyme A-transferase-independent butyrate re-assimilation in Clostridium acetobutylicum - evidence from a mathematical model

The hetero-dimeric CoA-transferase CtfA/B is believed to be crucial for the metabolic transition from acidogenesis to solventogenesis in Clostridium acetobutylicum as part of the industrial-relevant acetone-butanol-ethanol (ABE) fermentation. Here, the enzyme is assumed to mediate re-assimilation of acetate and butyrate during a pH-induced metabolic shift and to faciliate the first step of acetone formation from acetoacetyl-CoA. However, recent investigations using phosphate-limited continuous cultures have questioned this common dogma. To address the emerging experimental discrepancies, we investigated the mutant strain Cac-ctfA398s::CT using chemostat cultures. As a consequence of this mutation, the cells are unable to express functional ctfA and are thus lacking CoA-transferase activity. A mathematical model of the pH-induced metabolic shift, which was recently developed for the wild type, is used to analyse the observed behaviour of the mutant strain with a focus on re-assimilation activities for the two produced acids. Our theoretical analysis reveals that the ctfA mutant still re-assimilates butyrate, but not acetate. Based upon this finding, we conclude that C. acetobutylicum possesses a CoA-tranferase-independent butyrate uptake mechanism that is activated by decreasing pH levels. Furthermore, we observe that butanol formation is not inhibited under our experimental conditions, as suggested by previous batch culture experiments. In concordance with recent batch experiments, acetone formation is abolished in chemostat cultures using the ctfa mutant

Mathematical modelling of clostridial acetone-butanol-ethanol fermentation

Clostridial acetone-butanol-ethanol (ABE) fermentation features a remarkable shift in the cellular metabolic activity from acid formation, acidogenesis, to the production of industrial-relevant solvents, solventogensis. In recent decades, mathematical models have been employed to elucidate the complex interlinked regulation and conditions that determine these two distinct metabolic states and govern the transition between them. In this review, we discuss these models with a focus on the mechanisms controlling intra- and extracellular changes between acidogenesis and solventogenesis. In particular, we critically evaluate underlying model assumptions and predictions in the light of current experimental knowledge. Towards this end, we briefly introduce key ideas and assumptions applied in the discussed modelling approaches, but waive a comprehensive mathematical presentation. We distinguish between structural and dynamical models, which will be discussed in their chronological order to illustrate how new biological information facilitates the ‘evolution’ of mathematical models. Mathematical models and their analysis have significantly contributed to our knowledge of ABE fermentation and the underlying regulatory network which spans all levels of biological organization. However, the ties between the different levels of cellular regulation are not well understood. Furthermore, contradictory experimental and theoretical results challenge our current notion of ABE metabolic network structure. Thus, clostridial ABE fermentation still poses theoretical as well as experimental challenges which are best approached in close collaboration between modellers and experimentalists