Sea ice studies in the Spitsbergen-Greenland area

The author has identified the following significant results. Detailed information on the outflow through the Fram Strait of ice from the Polar Ocean over shorter periods was obtained. It is found that the speed of the outflow may vary about 100% over periods of a few days. The core of the East Greenland Current is found between 2 deg E and 4 deg W. The speed of the surface water at 81 deg N is for a calm period estimated to be about 10 cm/s. A new surging glacier was discovered and new fronts of several glaciers were determined. The variation of the snow line with respect to distance from the coast was for the first time determined for the southern part of Spitsbergen. Great variations were observed, from 200 m in east to 550 m in the central area of the island

Sea ice studies in the Spitsbergen, Greenland area

There are no author-identified significant results in this report

Human operator dynamics for aural compensatory tracking

The human operator's ability to control using aural information only and using combined aural and visual displays was investigated for a simple tracking task. Tracking error was presented to the test subjects using one- and two-ear displays. For both displays the pitch of the tone represented the magnitude of the tracking error. The operator's aural control characteristics were modeled as a describing function plus a remnant. The effects on the measured describing function and remnant of different system dynamics, changes in the frequency content of the input and different displays were determined during the study. The describing function and remnant data indicate that humans can control as well with aural cues as with visual cues for the task considered. However, the reduction in operator time delays, expected because of the generally faster human response to aural stimuli, was not evident in the results. It was also determined that the operators could control equally well with either the one- or two-ear display

Detection of Norovirus genogroup I and II by multiplex real-time RT- PCR using a 3'-minor groove binder-DNA probe

BACKGROUND: Due to an increasing number of norovirus infections in the last years rapid, specific, and sensitive diagnostic tools are needed. Reverse transcriptase-polymerase chain reactions (RT-PCR) have become the methods of choice. To minimize the working time and the risk of carryover contamination during the multi-step procedure of PCR the multiplex real-time RT-PCR for the simultaneous detection of genogroup I (GI) and II (GII) offers advantages for the handling of large amounts of clinical specimens. METHODS: We have developed and evaluated a multiplex one-tube RT-PCR using a combination of optimized GI and GII specific primers located in the junction between ORF1 and ORF2 of the norovirus genome. For the detection of GI samples, a 3'- minor groove binder-DNA probe (GI-MGB-probe) were designed and used for the multiplex real-time PCR. RESULTS: Comparable results to those of our in-house nested PCR and monoplex real-time-PCR were only obtained using the GI specific MGB-probe. The MGB-probe forms extremely stable duplexes with single-stranded DNA targets, which enabled us to design a shorter probe (length 15 nucleotides) hybridizing to a more conserved part of the GI sequences. 97 % of 100 previously norovirus positive specimens (tested by nested PCR and/or monoplex real-time PCR) were detected by the multiplex real-time PCR. A broad dynamic range from 2 × 10^1 to 2 × 10^7 genomic equivalents per assay using plasmid DNA standards for GI and GII were obtained and viral loads between 2.5 × 10^2 and 2 × 10^12 copies per ml stool suspension were detected. CONCLUSION: The one-tube multiplex RT real-time PCR using a minor groove binder -DNA probe for GI is a fast, specific, sensitive and cost-effective tool for the detection of norovirus infections in both mass outbreaks and sporadic cases and may have also applications in food and environmental testing

The QMAP and MAT/TOCO Experiments for Measuring Anisotropy in the Cosmic Microwave Background

We describe two related experiments that measured the anisotropy in the cosmic microwave background (CMB). QMAP was a balloon-borne telescope that flew twice in 1996, collecting data on degree angular scales with an array of six high electron mobility transistor-based amplifiers (HEMTs). QMAP was the first experiment to use an interlocking scan strategy to directly produce high signal-to-noise CMB maps. The QMAP gondola was then refit for ground based work as the MAT/TOCO experiment. Observations were made from 5200 m on Cerro Toco in Northern Chile in 1997 and 1998 using time-domain beam synthesis. MAT/TOCO was the first experiment to see both the rise and fall of the CMB angular spectrum, thereby localizing the position of the first peak to l_{peak}=216 +/- 14. In addition to describing the instruments, we discuss the data selection methods, checks for systematic errors, and we compare the MAT/TOCO results to those from recent experiments. We also correct the data to account for an updated calibration and a small contribution from foreground emission. We find the amplitude of the first peak for l between 160 and 240 to be T_{peak}=80.9 +/- 3.4 +/- 5.1 uK, where the first error is statistical and the second is from calibration.Comment: 31 pages, 11 figures, Submitted to Ap

Inhibition decorrelates visual feature representations in the inner retina

The retina extracts visual features for transmission to the brain. Different types of bipolar cell split the photoreceptor input into parallel channels and provide the excitatory drive for downstream visual circuits. Mouse bipolar cell types have been described at great anatomical and genetic detail, but a similarly deep understanding of their functional diversity is lacking. Here, by imaging light-driven glutamate release from more than 13,000 bipolar cell axon terminals in the intact retina, we show that bipolar cell functional diversity is generated by the interplay of dendritic excitatory inputs and axonal inhibitory inputs. The resulting centre and surround components of bipolar cell receptive fields interact to decorrelate bipolar cell output in the spatial and temporal domains. Our findings highlight the importance of inhibitory circuits in generating functionally diverse excitatory pathways and suggest that decorrelation of parallel visual pathways begins as early as the second synapse of the mouse visual system

A fast and flexible panoramic virtual reality system for behavioural and electrophysiological experiments

Ideally, neuronal functions would be studied by performing experiments with unconstrained animals whilst they behave in their natural environment. Although this is not feasible currently for most animal models, one can mimic the natural environment in the laboratory by using a virtual reality (VR) environment. Here we present a novel VR system based upon a spherical projection of computer generated images using a modified commercial data projector with an add-on fish-eye lens. This system provides equidistant visual stimulation with extensive coverage of the visual field, high spatio-temporal resolution and flexible stimulus generation using a standard computer. It also includes a track-ball system for closed-loop behavioural experiments with walking animals. We present a detailed description of the system and characterize it thoroughly. Finally, we demonstrate the VR system’s performance whilst operating in closed-loop conditions by showing the movement trajectories of the cockroaches during exploratory behaviour in a VR forest

PATRIC: The VBI PathoSystems Resource Integration Center

The PathoSystems Resource Integration Center (PATRIC) is one of eight Bioinformatics Resource Centers (BRCs) funded by the National Institute of Allergy and Infection Diseases (NIAID) to create a data and analysis resource for selected NIAID priority pathogens, specifically proteobacteria of the genera Brucella, Rickettsia and Coxiella, and corona-, calici- and lyssaviruses and viruses associated with hepatitis A and E. The goal of the project is to provide a comprehensive bioinformatics resource for these pathogens, including consistently annotated genome, proteome and metabolic pathway data to facilitate research into counter-measures, including drugs, vaccines and diagnostics. The project's curation strategy has three prongs: ‘breadth first’ beginning with whole-genome and proteome curation using standardized protocols, a ‘targeted’ approach addressing the specific needs of researchers and an integrative strategy to leverage high-throughput experimental data (e.g. microarrays, proteomics) and literature. The PATRIC infrastructure consists of a relational database, analytical pipelines and a website which supports browsing, querying, data visualization and the ability to download raw and curated data in standard formats. At present, the site warehouses complete sequences for 17 bacterial and 332 viral genomes. The PATRIC website () will continually grow with the addition of data, analysis and functionality over the course of the project