Bibliographic Summary of Arkansas Field Botany

Over 750 references, compiled over the past five years, are presented on floristics, taxonomy, autecology, synecology, species biology, habitat analysis, impact analysis, paleoenvironment, phytogeography, and history of field botany in Arkansas. This bibliography is reported to facilitate efforts to document and interpret the flora, the vegetation, and the natural heritage of Arkansas and to encourage others to participate in that collective effort

Distribution, Abundance, Status, and Phytogeography of Log Ferns (Dryopteris: Woodsiaceae) in Arkansas

A study of the distribution, abundance, status, and phytogeography of the six taxa of Log Ferns {Dryopteris: Woodsiaceae) that are known to occur in Arkansas was conducted from 1981 -1986. Five of these ferns are generally quite rare in Arkansas. Except for D. marginalis, all exist in Arkansas as small, peripheral populations that are marginal, outlier populations to the west and south or west and north of their metropolis. Two sterile, triploid hybrid taxa (D. X australls and D. X leedsii each occur at only one locality, and there with but one of their parent taxa. The population of the putatively sterile hybrid D. Xaustralis has a large number of juvenile plants that were not asexually produced byrhizome expansion. The microhabitat of D. Xaustralls is suggested to favor gametophyte establishment. It is speculated that some level of pseudomeiotic spore production and/or apogamy may be involved in the production of numerous juvenile sporophytes

Prediction of autism spectrum disorder diagnosis using nonlinear measures of language-related EEG at 6 and 12 months

BACKGROUND: Early identification of autism spectrum disorder (ASD) provides an opportunity for early intervention and improved developmental outcomes. The use of electroencephalography (EEG) in infancy has shown promise in predicting later ASD diagnoses and in identifying neural mechanisms underlying the disorder. Given the high co-morbidity with language impairment, we and others have speculated that infants who are later diagnosed with ASD have altered language learning, including phoneme discrimination. Phoneme learning occurs rapidly in infancy, so altered neural substrates during the first year of life may serve as early, accurate indicators of later autism diagnosis. METHODS: Using EEG data collected at two different ages during a passive phoneme task in infants with high familial risk for ASD, we compared the predictive accuracy of a combination of feature selection and machine learning models at 6 months (during native phoneme learning) and 12 months (after native phoneme learning), and we identified a single model with strong predictive accuracy (100%) for both ages. Samples at both ages were matched in size and diagnoses (n = 14 with later ASD; n = 40 without ASD). Features included a combination of power and nonlinear measures across the 10‑20 montage electrodes and 6 frequency bands. Predictive features at each age were compared both by feature characteristics and EEG scalp location. Additional prediction analyses were performed on all EEGs collected at 12 months; this larger sample included 67 HR infants (27 HR-ASD, 40 HR-noASD). RESULTS: Using a combination of Pearson correlation feature selection and support vector machine classifier, 100% predictive diagnostic accuracy was observed at both 6 and 12 months. Predictive features differed between the models trained on 6- versus 12-month data. At 6 months, predictive features were biased to measures from central electrodes, power measures, and frequencies in the alpha range. At 12 months, predictive features were more distributed between power and nonlinear measures, and biased toward frequencies in the beta range. However, diagnosis prediction accuracy substantially decreased in the larger, more behaviorally heterogeneous 12-month sample. CONCLUSIONS: These results demonstrate that speech processing EEG measures can facilitate earlier identification of ASD but emphasize the need for age-specific predictive models with large sample sizes to develop clinically relevant classification algorithms.K23 DC017983 - NIDCD NIH HHS; P50 HD105351 - NICHD NIH HHS; R01 DC010290 - NIDCD NIH HHS; R21 DC008637 - NIDCD NIH HHSPublished versio

Finishing the euchromatic sequence of the human genome

The sequence of the human genome encodes the genetic instructions for human physiology, as well as rich information about human evolution. In 2001, the International Human Genome Sequencing Consortium reported a draft sequence of the euchromatic portion of the human genome. Since then, the international collaboration has worked to convert this draft into a genome sequence with high accuracy and nearly complete coverage. Here, we report the result of this finishing process. The current genome sequence (Build 35) contains 2.85 billion nucleotides interrupted by only 341 gaps. It covers ∼99% of the euchromatic genome and is accurate to an error rate of ∼1 event per 100,000 bases. Many of the remaining euchromatic gaps are associated with segmental duplications and will require focused work with new methods. The near-complete sequence, the first for a vertebrate, greatly improves the precision of biological analyses of the human genome including studies of gene number, birth and death. Notably, the human enome seems to encode only 20,000-25,000 protein-coding genes. The genome sequence reported here should serve as a firm foundation for biomedical research in the decades ahead