Trophic ecology of the Endangered Darwin's frog inferred by stable isotopes

Indexación: Scopus.Acknowledgements. We thank Dr. Mauricio González-Chang for his contribution to invertebrate identification and Sally Wren for the revision of an earlier version of the manuscript. We are also extremely grateful to Tomás Elgueta Alvarez for providing Video S1. B.E.M.B. has a fellowship awarded by Universidad Andres Bello. This research project was approved by the Bioethics Committee at the Universi-dad Andres Bello, Chile (N°13/2015), and by permits N°5666/2013, N°230/2015, and N°212/2016 of the Chilean Agriculture and Livestock Service, and N°026/2013 and N°11/2015 IX of the Chilean National Forestry Corporation. This study was funded by the Dirección General de Investi-gación y Doctorados, Universidad Andres Bello, through grant N°DI-53-11/R and national funds through FONDE CYT N°11140902 and 1181758 (to C.S.A.).Darwin's frogs Rhinoderma spp. are the only known mouth-brooding frogs on Earth. The southern Darwin's frog, R. darwinii, is found in the temperate forests of southern South America, is listed as Endangered and could be the only extant representative of this genus. Based on stomach contents, invertebrate prey availability and stable isotope analysis, we determined for the first time trophic ecological parameters for this species. Our results showed that R. darwinii is a generalist sit-and-wait predator and a secondary consumer, with a trophic position of 2.9. Carbon and nitrogen isotope composition indicated that herbivore invertebrates are their main prey, detected in 68.1% of their assimilated food. The most consumed prey included mosquitoes, flies, crickets, grasshoppers and ants. Detritivore and carnivore invertebrates were also ingested, but in lower proportions. Our results contribute to a better understanding of the feeding habits of this fully terrestrial amphibian and provide the first insight into their role linking low forest trophic positions with intermediate predators. We provide valuable biological information for in situ and ex situ conservation which can be used when developing habitat protection, reintroduction and captive breeding programmes. As revealed here, stable isotope analysis is a valuable tool to study the trophic ecology of highly endangered and cryptic species. © The authors 2018.https://www.int-res.com/abstracts/esr/v36/p269-278

Xenopus laevis and Emerging Amphibian Pathogens in Chile

Amphibians face an extinction crisis with no precedence. Two emerging infectious diseases, ranaviral disease caused by viruses within the genus Ranavirus and chytridiomycosis due to Batrachochytrium dendrobatidis (Bd), have been linked with amphibian mass mortalities and population declines in many regions of the globe. The African clawed frog (Xenopus laevis) has been indicated as a vector for the spread of these pathogens. Since the 1970s, this species has been invasive in central Chile. We collected X. laevis and dead native amphibians in Chile between 2011 and 2013. We conducted post-mortem examinations and molecular tests for Ranavirus and Bd. Eight of 187 individuals (4.3 %) tested positive for Ranavirus: seven X. laevis and a giant Chilean frog (Calyptocephallela gayi). All positive cases were from the original area of X. laevis invasion. Bd was found to be more prevalent (14.4 %) and widespread than Ranavirus, and all X. laevis Bd-positive animals presented low to moderate levels of infection. Sequencing of a partial Ranavirus gene revealed 100 % sequence identity with Frog Virus 3. This is the first report of Ranavirus in Chile, and these preliminary results are consistent with a role for X. laevis as an infection reservoir for both Ranavirus and Bd

Chytridiomycosis outbreak in a Chilean giant frog (Calyptocephalella gayi) captive breeding program: genomic characterization and pathological findings

Emerging infectious diseases in wildlife are increasingly associated with animal mortality and species declines, but their source and genetic characterization often remains elusive. Amphibian chytridiomycosis, caused by the fungus Batrachochytrium dendrobatidis (Bd), has been associated with catastrophic and well-documented amphibian population declines and extinctions at the global scale. We used histology and whole-genome sequencing to describe the lesions caused by, and the genetic variability of, two Bd isolates obtained from a mass mortality event in a captive population of the threatened Chilean giant frog (Calyptocephalella gayi). This was the first time an association between Bd and high mortality had been detected in this charismatic and declining frog species. Pathological examinations revealed that 30 dead metamorphosed frogs presented agnathia or brachygnathia, a condition that is reported for the first time in association with chytridiomycosis. Phylogenomic analyses revealed that Bd isolates (PA1 and PA2) from captive C. gayi group with other Bd isolates (AVS2, AVS4, and AVS7) forming a single highly supported Chilean Bd clade within the global panzootic lineage of Bd (BdGPL). These findings are important to inform the strengthening of biosecurity measures to prevent the impacts of chytridiomycosis in captive breeding programs elsewhere

Pathological Findings in Cetaceans Sporadically Stranded Along the Chilean Coast

Indexación: Scopus.Chile has one of the largest coastlines in the world with at least 50% of the world cetacean species occurring within its jurisdictional waters. However, little is known regarding the health status and main causes of death in cetaceans off continental Chile. In this report, we summarize the major pathological findings and most likely causes of death of 15 cetaceans stranded along the Chilean coast between 2010 and 2019. Drowning, due to fishing gear entanglement, was the most likely cause of death in 3 Burmeister’s porpoises (Phocoena spinipinnis), a Risso’s dolphin (Grampus griseus) and a short-beaked common dolphin (Delphinus delphis). Additionally, the 3 Burmeister’s porpoises had mild to moderate eosinophilic and histiocytic pneumonia with pulmonary vasculitis associated with the nematode Pseudalius inflexus. A fourth Burmeister’s porpoise died of drowning after stranding alive at a sandy beach. Two fin whales (Balaenoptera physalus) died most likely of trauma associated with large vessel collision. A long-finned pilot whale (Globicephala melas) and an Orca (Orcinus orca) stranded most likely due to traumatic intra/interspecific interaction with other odontocete although for the pilot whale, osteoporosis with loss of alveolar bone and all teeth could have played a role. For a Strap-toothed beaked whale (Mesoplodon layardi), Dwarf sperm whale (Kogia sima), Southern right-whale dolphin (Lissodelphis peronii), Peale’s dolphin (Lagenorhynchus australis) and a dusky dolphin (Lagenorhynchus obscurus), the cause of stranding could not be determined. This study shows, despite the small number of examined carcasses that in Chile, human related trauma is an important cause of single cetacean stranding events. © Copyright © 2020 Alvarado-Rybak, Toro, Abarca, Paredes, Español-Jiménez and Seguel.https://www.frontiersin.org/articles/10.3389/fmars.2020.00684/ful

Synthesis of Batrachochytrium dendrobatidis infection in South America: amphibian species under risk and areas to focus research and disease mitigation

Amphibian chytridiomycosis, caused by Batrachochytrium dendrobatidis (Bd), has been recognized as the infectious disease causing the most catastrophic loss of biodiversity known to science, with South America being the most impacted region. We tested whether Bd prevalence is distributed among host taxonomy, ecoregion, conservation status and habitat preference in South America. Here we provide a synthesis on the extent of Bd infection across South America based on 21 648 molecular diagnostic assays, roles of certain species in the epidemiology of Bd and explore its association with the reported amphibian catastrophic declines in the region. We show that Bd is widespread, with a continental prevalence of 23.2%. Its occurrence in the region shows a phylogenetic signal and the probability of infection is determined by ecoregion, preferred habitat and extinction risk hosts' traits. The taxa exhibiting highest Bd occurrence were mostly aquatic amphibians, including Ranidae, Telmatobiidae, Hylodidae, Calyptocephalellidae and Pipidae. Surprisingly, families exhibiting unusually low Bd prevalence included species in which lethal chytridiomycosis and population declines have been described (genera Atelopus, Rhinoderma and Eleutherodactylus). Higher than expected prevalence of Bd occurred mainly in amphibians living in association with mountain environments in the Andes and Atlantic forests, reflecting highly favourable Bd habitats in these areas. Invasive amphibian species (e.g. Lithobates catesbeianus and Xenopus laevis) exhibited high Bd prevalence; thus we suggest using these as sentinels to understand their potential role as reservoirs, vectors or spreaders of Bd that can be subjected to management. Our results guide on the prioritization of conservation actions to prevent further biodiversity loss due to chytridiomycosis in the world's most amphibian diverse region

Genomic epidemiology of the emerging pathogen Batrachochytrium dendrobatidis from native and invasive amphibian species in Chile

Emerging fungal diseases represent a threat to food security, animal and human health worldwide. Amphibian chytridiomycosis, caused by the fungus Batrachochytrium dendrobatidis (Bd), has been associated with catastrophic and well-documented amphibian population declines and extinctions. For the first time, Bd was cultured from native and non-native wild amphibians in Chile. Phylogenomic analyses revealed that Chilean isolates AVS2, AVS4 and AVS7 group within the global panzootic lineage of Bd (BdGPL) in a single highly supported clade that includes a genotype previously isolated from the United Kingdom. Our results extend the known distribution of BdGPL in South America and suggest a single and relatively recent introduction of BdGPL into the country, providing additional support to the role of anthropogenic activity in the global spread of this panzootic lineage

High prevalence of chigger mite infection in a forest-specialist frog with evidence of parasite-related granulomatous myositis

Amphibians are hosts for a wide variety of micro- and macro-parasites. Chigger mites from the Hannemania genus are known to infect a wide variety of amphibian species across the Americas. In Chile, three species (H. pattoni, H. gonzaleacunae and H. ortizi) have been described infecting native anurans; however, neither impacts nor the microscopic lesions associated with these parasites have been described. Here, we document 70% prevalence of chigger mite infection in Eupsophus roseus and absence of infection in Rhinoderma darwinii in the Nahuelbuta Range, Chile. Additionally, we describe the macroscopic and microscopic lesions produced by H. ortizi in one of these species, documenting previously undescribed lesions (granulomatous myositis) within the host’s musculature. These findings highlight that further research to better understand the impacts of chigger mite infection on amphibians is urgently required in Chile and elsewhere

Bioclimatic and anthropogenic variables shape the occurrence of Batrachochytrium dendrobatidis over a large latitudinal gradient

AbstractAmphibian chytridiomycosis, caused by the fungus Batrachochytrium dendrobatidis (Bd), has caused the greatest known loss of biodiversity due to an infectious disease. We used Bd infection data from quantitative real-time PCR (qPCR) assays of amphibian skin swabs collected across Chile during 2008–2018 to model Bd occurrence with the aim to determine bioclimatic and anthropogenic variables associated with Bd infection. Also, we used Bd presence/absence records to identify geographical Bd high-risk areas and compare Bd prevalence and infection loads between amphibian families, ecoregions, and host ecology. Data comprised 4155 Bd-specific qPCR assays from 162 locations across a latitudinal gradient of 3700 km (18º to 51ºS). Results showed a significant clustering of Bd associated with urban centres and anthropogenically highly disturbed ecosystems in central-south Chile. Both Bd prevalence and Bd infection loads were higher in aquatic than terrestrial amphibian species. Our model indicated positive associations of Bd prevalence with altitude, temperature, precipitation and human-modified landscapes. Also, we found that macroscale drivers, such as land use change and climate, shape the occurrence of Bd at the landscape level. Our study provides with new evidence that can improve the effectiveness of strategies to mitigate biodiversity loss due to amphibian chytridiomycosis.</jats:p

50 Years of Cetacean Strandings Reveal a Concerning Rise in Chilean Patagonia

Indexación ScopusCetacean strandings (CS) have been reported in increasing numbers in coastal areas worldwide. Although the causes of these strandings are unknown, a number of anthropogenic and environmental factors have been suggested. This paper aims to characterize CS patterns and describe their fine-scale spatiotemporal dynamics. We analysed spatial and spatiotemporal CS patterns in Chile from January 1968 to January 2020. We identified a total of 389 CS events affecting eight cetacean families, 21 genera, and 35 species, which represent more than 85% of the reported species richness for the country. Most CS events (94.1%) were single (i.e., ≤two individuals). There were also 18 mass stranding (three to 24 individuals, 4.1%) and nine unusually large mass stranding events (>25 individuals, 2%). Purely spatial tests showed CS events appearing in random occurrence along the Chilean coast. Local tests for spatio-temporal clusters, however, identified a greater number of hotspots reported in the southernmost part of the country, namely, Chilean Patagonia. Specifically, significant spatio-temporal clusters were identified and defined as containing three or more individuals within a two-month period as a focal coastal event (<1 km radius). It is a cause of concern that CS events in Chile have been increasing consistently over the last decades, and although we were not able to identify their causes, we are able to highlight the importance of changes in climate conditions and of an increase in monitoring activities as primary drivers for such patterns, particularly important in Chilean Patagonia. © 2020, The Author(s).https://www-nature-com.recursosbiblioteca.unab.cl/articles/s41598-020-66484-

Development and worldwide use of non-lethal, and minimal population-level impact, protocols for the isolation of amphibian chytrid fungi

T.W.J.G., M.C.F., D.S.S., A.L., E.C., F.C.C., J.B., A.A.C., C.M., F.S., B.R.S., S.O., were supported through the Biodiversa project RACE: Risk Assessment of Chytridiomycosis to European Amphibian Biodiversity (NERC standard grant NE/K014455/1 and NE/E006701/1; ANR-08-BDVA-002-03). M.C.F., J.S., C.W., P.G. were supported by the Leverhulme Trust (RPG-2014-273), M.C.F., A.C., C.W. were supported by the Morris Animal Foundation. J.V. was supported by the Bolyai János Research Grant of the Hunagrian Academy of Sciences (BO/00597/14). F.G. and D.G. were supported by the Conservation Leadership Programme Future Conservationist Award. C.S.A. was supported by Fondecyt (No. 1181758). M.C.F. and A.C. were supported by. Mohamed bin Zayed Species Conservation Fund Project (152510704). GMR held a doctoral scholarship (SFRH/BD/69194/2010) from Fundação para a Ciência e a Tecnologia. L.F.T., C.L., L.P.R. K.R.Z., T.Y.J., T.S.J. were supported by São Paulo Research Foundation (FAPESP #2016/25358-3), the National Counsel of Technological and Scientific Development (CNPq #300896/2016–6) and a Catalyzing New International Collaborations grant from the United States NSF (OISE-1159513). C.S.A. was supported by Fondecyt (No. 1181758). T.M.D. was supported by the Royal Geographical Society and the Royal Zoological Society of Scotland. B.W. was supported by the National Research Foundation of Korea (2015R1D1A1A01057282).Peer reviewedPublisher PD