Does nitrate deposition following astrophysical ionizing radiation events pose an additional threat to amphibians?

It is known that amphibians are especially susceptible to the combination of heightened UVB radiation and increased nitrate concentrations. Various astrophysical events have been suggested as sources of ionizing radiation that could pose a threat to life on Earth, through destruction of the ozone layer and subsequent increase in UVB, followed by deposition of nitrate. In this study, we investigate whether the nitrate deposition following an ionizing event is sufficiently large to cause an additional stress beyond that of the heightened UVB previously considered. We have converted predicted nitrate depositions to concentration values, utilizing data from the New York State Department of Environmental Conservation Acid Rain Monitoring Network web site. Our results show that the increase in nitrate concentration in bodies of water following the most intense ionization event likely in the last billion years would not be sufficient to cause a serious additional stress on amphibian populations and may actually provide some benefit by acting as fertilizer.Comment: This version is a longer, more detailed draft of an article submitted to the journal Astrobiolog

Atmospheric Consequences of Cosmic Ray Variability in the Extragalactic Shock Model II: Revised ionization levels and their consequences

It has been suggested that galactic shock asymmetry induced by our galaxy's infall toward the Virgo Cluster may be a source of periodicity in cosmic ray exposure as the solar system oscillates perpendicular to the galactic plane. Here we investigate a mechanism by which cosmic rays might affect terrestrial biodiversity, ionization and dissociation in the atmosphere, resulting in depletion of ozone and a resulting increase in the dangerous solar UVB flux on the ground, with an improved ionization background computation averaged over a massive ensemble (about 7 x 10^5) shower simulations. We study minimal and full exposure to the postulated extragalactic background. The atmospheric effects are greater than with our earlier, simplified ionization model. At the lower end of the range effects are too small to be of serious consequence. At the upper end of the range, ~6 % global average loss of ozone column density exceeds that currently experienced due to effects such as accumulated chlorofluorocarbons. The intensity is less than a nearby supernova or galactic gamma-ray burst, but the duration would be about 10^6 times longer. Present UVB enhancement from current ozone depletion ~3% is a documented stress on the biosphere, but a depletion of the magnitude found at the upper end of our range would double the global average UVB flux. For estimates at the upper end of the range of the cosmic ray variability over geologic time, the mechanism of atmospheric ozone depletion may provide a major biological stress, which could easily bring about major loss of biodiversity. Future high energy astrophysical observations will resolve the question of whether such depletion is likely.Comment: 22 pages, 5 figures, to be published in Journal of Geophysical Research--Planets. This is an update and replacement for our 2008 paper, with a much more extensive simulation of air shower ionization. Ionization effects and ozone depletion are somewhat large

A portable neutron spectroscope (NSPECT) for detection, imaging and identification of nuclear material

We have developed, fabricated and tested a prototype imaging neutron spectrometer designed for real-time neutron source location and identification. Real-time detection and identification is important for locating materials. These materials, specifically uranium and transuranics, emit neutrons via spontaneous or induced fission. Unlike other forms of radiation (e.g. gamma rays), penetrating neutron emission is very uncommon. The instrument detects these neutrons, constructs images of the emission pattern, and reports the neutron spectrum. The device will be useful for security and proliferation deterrence, as well as for nuclear waste characterization and monitoring. The instrument is optimized for imaging and spectroscopy in the 1-20 MeV range. The detection principle is based upon multiple elastic neutron-proton scatters in organic scintillator. Two detector panel layers are utilized. By measuring the recoil proton and scattered neutron locations and energies, the direction and energy spectrum of the incident neutrons can be determined and discrete and extended sources identified. Event reconstruction yields an image of the source and its location. The hardware is low power, low mass, and rugged. Its modular design allows the user to combine multiple units for increased sensitivity. We will report the results of laboratory testing of the instrument, including exposure to a calibrated Cf-252 source. Instrument parameters include energy and angular resolution, gamma rejection, minimum source identification distances and times, and projected effective area for a fully populated instrument

Tree differences in primary and secondary growth drive convergent scaling in leaf area to sapwood area across Europe

open28siTrees scale leaf (AL) and xylem (AX) areas to couple leaf transpiration and carbon gain with xylem water transport. Some species are known to acclimate in AL : AX balance in response to climate conditions, but whether trees of different species acclimate in AL : AX in similar ways over their entire (continental) distributions is unknown. We analyzed the species and climate effects on the scaling of AL vs AX in branches of conifers (Pinus sylvestris, Picea abies) and broadleaved (Betula pendula, Populus tremula) sampled across a continental wide transect in Europe. Along the branch axis, AL and AX change in equal proportion (isometric scaling: b ˜ 1) as for trees. Branches of similar length converged in the scaling of AL vs AX with an exponent of b = 0.58 across European climates irrespective of species. Branches of slow‐growing trees from Northern and Southern regions preferentially allocated into new leaf rather than xylem area, with older xylem rings contributing to maintaining total xylem conductivity. In conclusion, trees in contrasting climates adjust their functional balance between water transport and leaf transpiration by maintaining biomass allocation to leaves, and adjusting their growth rate and xylem production to maintain xylem conductance.openGiai Petit; Georg von Arx; Natasa Kiorapostolou; Silvia Lechthaler; Angela Luisa Prendin; Tommaso Anfodillo; Maria C. Caldeira; Herve Cochard; Paul Copini; Alan Crivellaro; Roman Gebauer; Jozica Gricar; Leila Gronholm; Teemu Holtta; Tuula Jyske; Anna Lintunen; Raquel Lobo-do-Vale; Mikko Peltoniemi; Richard L. Peters; Sylvain Delzon; Martina Lavric; Elisabeth M. R. Robert; Sılvia Roig Juan; Martin Senfeldr; Kathy Steppe ; Josef Urban; Janne Van Camp; Frank SterckPetit, Giai; von Arx, Georg; Kiorapostolou, Natasa; Lechthaler, Silvia; Prendin, ANGELA LUISA; Anfodillo, Tommaso; Caldeira, Maria C.; Cochard, Herve; Copini, Paul; Crivellaro, Alan; Gebauer, Roman; Gricar, Jozica; Gronholm, Leila; Holtta, Teemu; Jyske, Tuula; Lintunen, Anna; Lobo-do-Vale, Raquel; Peltoniemi, Mikko; Peters, Richard L.; Delzon, Sylvain; Lavric, Martina; Robert, Elisabeth M. R.; Roig Juan, Sılvia; Senfeldr, Martin; Steppe, Kathy; Urban, Josef; Van Camp, Janne; Sterck, Fran

Carphophis amoenus

Number of Pages: 7Integrative BiologyGeological Science

Data in support of genetic architecture of glucosinolate variations in Brassica napus

The transcriptome-based GWAS approach, Associative Transcriptomics (AT), which was employed to uncover the genetic basis controlling quantitative variation of glucosinolates in Brassica napus vegetative tissues is described. This article includes the phenotypic data of leaf and root glucosinolate (GSL) profiles across a diversity panel of 288 B. napus genotypes, as well as information on population structure and levels of GSLs grouped by crop types. Moreover, data on genetic associations of single nucleotide polymorphism (SNP) markers and gene expression markers (GEMs) for the major GSL types are presented in detail, while Manhattan plots and QQ plots for the associations of individual GSLs are also included. Root genetic association are supported by differential expression analysis generated from root RNA-seq. For further interpretation and details, please see the related research article entitled ‘Genetic architecture of glucosinolate variation in Brassica napus’ [1]

Larvae and pupae of New Guinea Tabanidae (Diptera) : 1. Species of Chrysops Meigen

Information on the immature stages of Australasian Tabanidae found in published literature dealt with only 17 species, all so far known only from Australia and none representing the genus Chrysops Meigen. Two of the four Australasian species of Chrysops are found on the island of New Guinea, and both, C. albicinctus Wulp and C. australis Ricardo, are described and illustrated

Islands within an almost island: History, myth, and aislamiento in Baja California, Mexico

This paper examines the persistent histories and lasting effects of the Baja California peninsula\u27s status as an almost island. The peninsula is almost an island in so many ways. Its reputation as an island-like entity has also ben strengthened by a longstanding myth that it was, in fact, an actual island. In many senses it was an island - isolated, remote, difficult to envision, understand, and control. Geography and climate played a vital role in all of this, but so, too, did human imagination. The author uses the concept of shima, along with discussions about the dual meanings of the Spanish word aislamiento as a way to explore these issues. Aislamiento can refer more concretely to the effects of being on a landform surrounded by water, on the one hand, or the deep social and psychological effects of isolation. Ultimately, the author argues that it is this sense of isolation that works to produce, regardless of geographic and cartographic reality, a powerful sense of islandness

Genetic architecture of glucosinolate variation in Brassica napus

The diverse biological activities of glucosinolate (GSL) hydrolysis products play significant biological and economical roles in the defense system and nutritional qualities of Brassica napus (oilseed rape). Yet, genomic-based study of the B. napus GSL regulatory mechanisms are scarce due to the complexity of working with polyploid species. To address these challenges, we used transcriptome-based GWAS approach, Associative Transcriptomics (AT), across a diversity panel of 288 B. napus genotypes to uncover the underlying genetic basis controlling quantitative variation of GSLs in B. napus vegetative tissues. Single nucleotide polymorphism (SNP) markers and gene expression markers (GEMs) associations identify orthologues of MYB28/HAG1 (AT5G61420), specifically the copies on chromosome A9 and C2, to be the key regulators of aliphatic GSL variation in leaves. We show that the positive correlation observed between aliphatic GSLs in seed and leaf is due to the amount synthesized, as controlled by Bna.HAG1.A9 and Bna.HAG1.C2, rather than by variation in the transport processes. In addition, AT and differential expression analysis in root tissues implicate an orthologue of MYB29/HAG3 (AT5G07690), Bna.HAG3.A3, as controlling root aromatic GSL variation. Based on the root expression data we also propose Bna.MAM3.A3 to have a role in controlling phenylalanine chain elongation for aromatic GSL biosynthesis. This work uncovers a regulator of homophenylalanine-derived aromatic GSLs and implicates the shared biosynthetic pathways between aliphatic and aromatic GSLs