Development of the excretory system in a polyplacophoran mollusc: stages in metanephridial system development

Background: Two types of excretory systems, protonephridia and metanephridial systems are common among bilaterians. The homology of protonephridia of lophotrochozoan taxa has been widely accepted. In contrast, the homology of metanephridial systems - including coelomic cavities as functional units - among taxa as well as the homology between the two excretory systems is a matter of ongoing discussion. This particularly concerns the molluscan kidneys, which are mostly regarded as being derived convergently to the metanephridia of e.g. annelids because of different ontogenetic origin. A reinvestigation of nephrogenesis in polyplacophorans, which carry many primitive traits within molluscs, could shed light on these questions. Results: The metanephridial system of Lepidochitona corrugata develops rapidly in the early juvenile phase. It is formed from a coelomic anlage that soon achieves endothelial organization. The pericardium and heart are formed from the central portion of the anlage. The nephridial components are formed by outgrowth from lateral differentiations of the anlage. Simultaneously with formation of the heart, podocytes appear in the atrial wall of the pericardium. In addition, renopericardial ducts, kidneys and efferent nephroducts, all showing downstream ciliation towards the internal lumen, become differentiated (specimen length: 0.62 mm). Further development consists of elongation of the kidney and reinforcement of filtration and reabsorptive structures. Conclusions: During development and in fully formed condition the metanephridial system of Lepidochitona corrugata shares many detailed traits (cellular and overall organization) with the protonephridia of the same species. Accordingly, we suggest a serial homology of various cell types and between the two excretory systems and the organs as a whole. The formation of the metanephridial system varies significantly within Mollusca, thus the mode of formation cannot be used as a homology criterion. Because of similarities in overall organization, we conclude that the molluscan metanephridial system is homologous with that of the annelids not only at the cellular but also at the organ level

New haplochromine cichlid from the upper Miocene (9-10 MYA) of Central Kenya

Background: The diversification process known as the Lake Tanganyika Radiation has given rise to the most speciose clade of African cichlids. Almost all cichlid species found in the lakes Tanganyika, Malawi and Victoria, comprising a total of 12-16 tribes, belong to this clade. Strikingly, all the species in the latter two lakes are members of the tribe Haplochromini, whose origin remains unclear. The 'out of Tanganyika' hypothesis argues that the Haplochromini emerged simultaneously with other cichlid tribes and lineages in Lake Tanganyika, presumably about 5-6 million years ago (MYA), and that their presence in the lakes Malawi and Victoria and elsewhere in Africa today is due to later migrations. In contrast, the 'melting pot Tanganyika hypothesis' postulates that Haplochromini emerged in Africa prior to the formation of Lake Tanganyika, and that their divergence could have begun about 17 MYA. Haplochromine fossils could potentially resolve this debate, but such fossils are extremely rare. Results: Here we present a new fossil haplochromine from the upper Miocene site Waril (9-10 million years) in Central Kenya. Comparative morphology, supported by Micro-CT imaging, reveals that it bears a unique combination of characters relating to dentition, cranial bones, caudal skeleton and meristic traits. Its most prominent feature is the presence of exclusively unicuspid teeth, with canines in the outer tooth row. †Warilochromis unicuspidatus gen. et sp. nov. shares this combination of characters solely with members of the Haplochromini and its lacrimal morphology indicates a possible relation to the riverine genus Pseudocrenilabrus. Due to its fang-like dentition and non-fusiform body, †W. unicuspidatus gen. et sp. nov. might have employed either a sit-and-pursue or sit-and-wait hunting strategy, which has not been reported for any other fossil haplochromine cichlid. Conclusions: The age of the fossil (9-10 MYA) is incompatible with the 'out of Tanganyika' hypothesis, which postulates that the divergence of the Haplochromini began only 5-6 MYA. The presence of this fossil in an upper Miocene palaeolake in the Central Kenya Rift, as well as its predatory lifestyle, indicate that Haplochromini were already an important component of freshwater drainages in East Africa at that time

3D-anatomy and systematics of cocculinid-like limpets (Gastropoda: Cocculiniformia): more data, some corrections, but still an enigma

New material and new methodologies substantially widen the anatomical knowledge on cocculinid limpets. We first provide 3D-anatomies of Fedikovella caymanensis and Teuthirostria cancellata based on serial sections. Both species differ in several major points (mainly the gill-type and several features of the alimentary tract) from typical cocculinids, accordingly they are classified in a new clade, Teuthirostriidae fam. nov. Specimens studied by McLean and Harasewych (LA County Mus Contrib Sci 453:1-33, 1995) under Fedikovella beanii probably represent another species new to science. Additional investigations of original (type) section series of Cocculina laevis Thiele, 1904 (type species of Paracocculina Haszprunar, 1987) and of Cocculina radiata Thiele, 1904 (type species of Coccocrater Haszprunar, 1987) imply some nomenclatorial revisions: Cocculina cervae Fleming, 1948 is designated as type species of Pedococculina gen. nov. Anatomical characters confirm the subsequent placement of Cocculina viminensis Rocchini, 1990 into Coccopigya Marshall, 1986, whereas the original generic status of the whale-fall inhabitant Cocculina craigsmithi McLean, 1992 is confirmed despite the unusual habitat. The latter species probably has symbiotic bacteria in the midgut gland;if so this might be due to the environmental and feeding conditions at whale cadavers or hydrothermal vents. Contrary to Lepetelloidea, the Cocculiniformia cannot be included in Vetigastropoda. Recent molecular data support a sistergroup relationship of Cocculiniformia with Neomphalida, and we add the phenotypic perspective on this so-called Neomphaliones-hypothesis. In particular, more phylogenomic data are needed to specify the position of Cocculinida among the rhipidoglossate Gastropoda

Connecting structure and function from organisms to molecules in small-animal symbioses through chemo-histo-tomography

Our understanding of metabolic interactions between small symbi-otic animals and bacteria or parasitic eukaryotes that reside within their bodies is extremely limited. This gap in knowledge originates from a methodological challenge, namely to connect histologi -cal changes in host tissues induced by beneficial and parasitic (micro)organisms to the underlying metabolites. We addressed this challenge and developed chemo-histo-tomography (CHEMHIST), a culture-independent approach to connect anatomic structure and metabolic function in millimeter-sized symbiotic animals. CHEMHIST combines chemical imaging of metabolites based on mass spectrom-etry imaging (MSI) and microanatomy-based micro-computed X-ray tomography (micro-CT) on the same animal. Both high-resolution MSI and micro-CT allowed us to correlate the distribution of metab-olites to the same animal's three-dimensional (3D) histology down to submicrometer resolutions. Our protocol is compatible with tissue-specific DNA sequencing and fluorescence in situ hybridiza-tion for the taxonomic identification and localization of the associ-ated micro(organisms). Building CHEMHIST upon in situ imaging, we sampled an earthworm from its natural habitat and created an in-teractive 3D model of its physical and chemical interactions with bacteria and parasitic nematodes in its tissues. Combining MSI and micro-CT, we present a methodological groundwork for connecting metabolic and anatomic phenotypes of small symbiotic animals that often represent keystone species for ecosystem functioning

3D Interactive model of lumbar spinal structures of anaesthetic interest

A 3D model of lumbar structures of anesthetic interest was reconstructed from human magnetic resonance (MR) images and embedded in a Portable Document Format (PDF) file, which can be opened by freely available software and used offline. The MR images were analyzed using a specific 3D software platform for biomedical data. Models generated from manually delimited volumes of interest and selected MR images were exported to Virtual Reality Modeling Language format and were presented in a PDF document containing JavaScript-based functions. The 3D file and the corresponding instructions and license files can be downloaded freely at http://diposit.ub.edu/dspace/handle/2445/44844?locale5en. The 3D PDF interactive file includes reconstructions of the L3-L5 vertebrae, intervertebral disks, ligaments, epidural and foraminal fat, dural sac and nerve root cuffs, sensory and motor nerve roots of the cauda equina, and anesthetic approaches (epidural medial, spinal paramedial, and selective nerve root paths); it also includes a predefined sequential educational presentation. Zoom, 360 rotation, selective visualization, and transparency graduation of each structure and clipping functions are available. Familiarization requires no specialized informatics knowledge. The ease with which the document can be used could make it valuable for anatomical and anesthetic teaching and demonstration of patient information

Re-evaluation of Zospeum schaufussi von Frauenfeld, 1862 and Z. suarezi Gittenberger, 1980, including the description of two new Iberian species using Computer Tomography (CT) (Eupulmonata, Ellobioidea, Carychiidae)

The present study aims to clarify the confused taxonomy of Z. schaufussi von Frauenfeld, 1862 and Zospeum suarezi Gittenberger, 1980. Revision of Iberian Zospeum micro snails is severely hindered by uncertainties regarding the identity of the oldest Iberian Zospeum species, Z. schaufussi von Frauenfeld, 1862. In this paper, we clarify its taxonomic status by designating a lectotype from the original syntype series and by describing its internal and external shell morphology. Using SEM-EDX, we attempt to identify the area of the type locality cave more precisely than "a cave in Spain". The shell described and illustrated by Gittenberger (1980) as Z. schaufussi appears not to be conspecific with the lectotype shell, and is considered a separate species, Z. gittenbergeri Jochum, Prieto & De Winter, sp. n. Zospeum suarezi was described from various caves in NW Spain. Study of the type material reveals that these shells are not homogenous in shell morphology. The holotype shell of Z. suarezi is imaged here for the first time. The paratype shell, illustrated by Gittenberger (1980) from a distant, second cave, is described as Zospeum praetermissum Jochum, Prieto & De Winter, sp. n. The shell selected here as lectotype of Z. schaufussi, was also considered a paratype of Z. suarezi by Gittenberger (1980). Since this specimen is morphologically very similar to topotypic shells of Z. suarezi, the latter species is considered a junior synonym of Z. schaufussi (syn. n.). The internal shell morphology of all these taxa is described and illustrated using X-ray Micro Computer Tomography (Micro-CT).Special gratitude goes to Anita Eschner (NHMW) for helping AJ access the von Frauenfeld collection and for providing valuable insights and primary literature. We are grateful to Markus Heneka and Andreas Heneka (RJL Micro & Analytic GmbH, Karlsdorf-Neuthard) for their help and technical prowess with the CT and SEM-EDX scans. We thank Katharina Jaksch-Mason (NHMW) for LM imaging the Z. schaufussi syntype material. We also gratefully acknowledge Emmanuel Tardy's (MHNG) image contributions and notes of the Gittenberger (1980) material formerly housed in the MHNG collection. Appreciation also goes to Gerald Favre for sharing his excellent forty-year-old speleological field notes with us. We acknowledge Thomas Neubauer and Michael Duda for their kind help in transporting the lectotype back and forth from Vienna. We thank the editor, Thierry Backeljau, the ZooKeys editorial team and our reviewers, Benjamin Gomez, Edmund Gittenberger and Barna Pall-Gergely for their helpful suggestions towards improving the manuscript. Lastly, we are indebted to SYNTHESYS for providing generous support in the form of three grants to AJ from the SYNTHESYS Project http://www.synthesys.info/, which is financed by the European Community Research Infrastructure Action under the FP7 "Capacities" Program

Can nanolites enhance eruption explosivity?

Degassing dynamics play a crucial role in controlling the explosivity of magma at erupting volcanoes. Degassing of magmatic water typically involves bubble nucleation and growth, which drive magma ascent. Crystals suspended in magma may influence both nucleation and growth of bubbles. Micron- to centimeter-sized crystals can cause heterogeneous bubble nucleation and facilitate bubble coalescence. Nanometer-scale crystalline phases, so-called “nanolites”, are an underreported phenomenon in erupting magma and could exert a primary control on the eruptive style of silicic volcanoes. Yet the influence of nanolites on degassing processes remains wholly uninvestigated. In order to test the influence of nanolites on bubble nucleation and growth dynamics, we use an experimental approach to document how nanolites can increase the bubble number density and affect growth kinetics in a degassing nanolite-bearing silicic magma. We then examine a compilation of these values from natural volcanic rocks from explosive eruptions leading to the inference that some very high naturally occurring bubble number densities could be associated with the presence of magmatic nanolites. Finally, using a numerical magma ascent model, we show that for reasonable starting conditions for silicic eruptions, an increase in the resulting bubble number density associated with nanolites could push an eruption that would otherwise be effusive into the conditions required for explosive behavior

Vesiculation and Quenching During Surtseyan Eruptions at Hunga Tonga-Hunga Ha'apai Volcano, Tonga

Surtseyan eruptions are shallow to emergent subaqueous explosive eruptions that owe much of their characteristic behavior to the interaction of magma with water. The difference in thermal properties between water and air affects the cooling and postfragmentation vesiculation processes in magma erupted into the water column. Here we study the vesiculation and cooling processes during the 2009 and 2014–2015 Surtseyan eruptions of Hunga Tonga‐Hunga Ha'apai volcano by combining 2‐D and 3‐D vesicle‐scale analyses of lapilli and bombs and numerical thermal modeling. Most of the lapilli and bombs show gradual textural variations from rim to core. The vesicle connectivity in the lapilli and bombs increases with vesicularity from fully isolated to completely connected and also increases from rim to core in transitional clasts. We interpret the gradual textural variations and the connectivity‐vesicularity relationships as the result of postfragmentation bubble growth and coalescence interrupted at different stages by quenching in water. The measured vesicle size distributions are bimodal with a population of small and large vesicles. We interpret this bimodality as the result of two nucleation events, one prefragmentation with the nucleation and growth of large bubbles and one postfragmentation with nucleation of small vesicles. We link the thermal model with the textural variations in the clasts—showing a dependence on particle size, Leidenfrost effect, and initial melt temperature. In particular, the cooling profiles in the bombs are consistent with the gradual textural variations from rim to core in the clasts, likely caused by variations in time available for vesiculation before quenching

Utopia documents: linking scholarly literature with research data

Motivation: In recent years, the gulf between the mass of accumulating-research data and the massive literature describing and analyzing those data has widened. The need for intelligent tools to bridge this gap, to rescue the knowledge being systematically isolated in literature and data silos, is now widely acknowledged