Assessment of optimal growth conditions for specific carotenoids production by Chlorella vulgaris

Exploration of regional microalgae for carotenoids production under optimized cultural conditions is a sustainable economic and technical perspective. This study details comprehensive research on the influence of growth conditions on microalgal carotenoids. Carotenoid triggering factors were optimized to identify suitable growth conditions to produce specific carotenoids by Chlorella vulgaris.  Media optimization and cultivation conditions were the factors considered and the results revealed the optimum growth conditions for carotenoid production by C. vulgaris was pH 8, 35°C temperature, 0.04 M salinity and 160 µE\m²\sec light intensity. Among the nutrient sources, potassium nitrate and potassium phosphate were suitable for nitrogen and phosphorous supplements. The results indicated optimizing the culture conditions and nutrient sources help to attain desirable carotenoid production by C. vulgaris. Specific carotenoids were extracted from the algal extract and were identified by high-performance liquid chromatography in which lutein (8.8%) was present as major carotenoid followed by astaxanthin (4.6%) and ?-carotene (3.9%). This study revealed that that carotenoid production by C. vulgaris could be enhanced by manipulating culture conditions thereby attain desirable carotenoid production.

Macromitrium hymenostomum Mont.- A New record for South India

Macromitrium hymenostomum Mont., a pleurocarpous moss (Orthotrichaceae) has been collected from South India and described here. The taxon was earlier known from western Himalaya only. Present report provides extended distribution of the taxon from North to South India. The plants are characterized by pleurocarpous habit, yellowish-green to dark-brown, pinnately branched plants, closely arranged ovate-lanceolate leaves with single costa, unipapillose leaf cells and disintegrated peristome.

Cholangiocarcinoma Presenting as Humoral Hypercalcemia of Malignancy: A Case Report and Literature Review

Humoral hypercalcemia of malignancy (HHM) is most commonly encountered in squamous cell carcinoma (SCC) of different organs, and It is characterized by elevated parathyroid hormone-related peptide (PTHrP) levels. It may be seen as a manifestation of cholangiocarcinoma (CCC) at presentation and later in the course of the disease. However, HHM due to intrahepatic cholangiocarcinoma is a rare association and is associated with a poor prognosis. We herein report a case of hypercalcemia presenting as the first manifestation of an underlying rare variant of intrahepatic cholangiocarcinoma. Our patient is a 57-year-old male who presented to the emergency room with severe symptoms of constipation and polyuria and was admitted to the hospital for symptomatic hypercalcemia. He was found to have a hypermetabolic 15 cm liver mass, abdominal lymph nodes on imaging, which was subsequently diagnosed as adenosquamous cholangiocarcinoma by liver biopsy. This necessitated an urgent inpatient treatment with gemcitabine/cisplatin combination chemotherapy to control the aggressive nature of the malignancy. However, he deteriorated and expired after three months of his diagnosis. Adenosquamous cholangiocarcinoma is a very rare variant of a liver tumor. It develops due to squamous metaplasia of an underlying cholangiocarcinoma and usually has aggressive clinicopathological features. HMM is a life-threatening, yet unrecognized, phenomenon of cholangiocarcinoma, which represents a poor prognostic marker. Prompt recognition of this complication is important for preventing serious complications associated with hypercalcemia and to improve the quality of life of these patients

Implications of tolerance to iron toxicity on root system architecture changes in rice (Oryza sativa L.)

IntroductionToxicity due to excess soil iron (Fe) is a significant concern for rice cultivation in lowland areas with acidic soils. Toxic levels of Fe adversely affect plant growth by disrupting the absorption of essential macronutrients, and by causing cellular damage. To understand the responses to excess Fe, particularly on seedling root system, this study evaluated rice genotypes under varying Fe levels.MethodsSixteen diverse rice genotypes were hydroponically screened under induced Fe levels, ranging from normal to excess. Morphological and root system characteristics were observed. The onset of leaf bronzing was monitored to identify the toxic response to the excess Fe. Additionally, agronomic and root characteristics were measured to classify genotypes into tolerant and sensitive categories by computing a response stability index.ResultsOur results revealed that 460 ppm of Fe in the nutrient solution served as a critical threshold for screening genotypes during the seedling stage. Fe toxicity significantly affected root system traits, emphasizing the consequential impact on aerial biomass and nutrient deprivation. To classify genotypes into tolerant and sensitive categories, leaf bronzing score was used as a major indicator of Fe stress. However, the response stability index provided a robust basis for classification for the growth performance. Apart from the established tolerant varieties, we could identify a previously unrecognized tolerant variety, ILS 12–5 in this study. Some of the popular mega varieties, including BPT 5204 and Pusa 44, were found to be highly sensitive.DiscussionOur findings suggest that root system damage, particularly in root length, surface area, and root volume, is the key factor contributing to the sensitivity responses under Fe toxicity. Tolerant genotypes were found to retain more healthy roots than the sensitive ones. Fe exclusion, by reducing Fe2+ uptake, may be a major mechanism for tolerance among these genotypes. Further field evaluations are necessary to confirm the behavior of identified tolerant and sensitive lines under natural conditions. Insights from the study provide potential scope for enhancement of tolerance through breeding programs as well as throw light on the role root system in conferring tolerance

The Australian dingo is an early offshoot of modern breed dogs

Dogs are uniquely associated with human dispersal and bring transformational insight into the domestication process. Dingoes represent an intriguing case within canine evolution being geographically isolated for thousands of years. Here, we present a high-quality de novo assembly of a pure dingo (CanFam_DDS). We identified large chromosomal differences relative to the current dog reference (CanFam3.1) and confirmed no expanded pancreatic amylase gene as found in breed dogs. Phylogenetic analyses using variant pairwise matrices show that the dingo is distinct from five breed dogs with 100% bootstrap support when using Greenland wolf as the outgroup. Functionally, we observe differences in methylation patterns between the dingo and German shepherd dog genomes and differences in serum biochemistry and microbiome makeup. Our results suggest that distinct demographic and environmental conditions have shaped the dingo genome. In contrast, artificial human selection has likely shaped the genomes of domestic breed dogs after divergence from the dingo

Cancer Incidence, Mortality, Years of Life Lost, Years Lived With Disability, and Disability-Adjusted Life Years for 29 Cancer Groups From 2010 to 2019: A Systematic Analysis for the Global Burden of Disease Study 2019.

The Global Burden of Diseases, Injuries, and Risk Factors Study 2019 (GBD 2019) provided systematic estimates of incidence, morbidity, and mortality to inform local and international efforts toward reducing cancer burden. To estimate cancer burden and trends globally for 204 countries and territories and by Sociodemographic Index (SDI) quintiles from 2010 to 2019. The GBD 2019 estimation methods were used to describe cancer incidence, mortality, years lived with disability, years of life lost, and disability-adjusted life years (DALYs) in 2019 and over the past decade. Estimates are also provided by quintiles of the SDI, a composite measure of educational attainment, income per capita, and total fertility rate for those younger than 25 years. Estimates include 95% uncertainty intervals (UIs). In 2019, there were an estimated 23.6 million (95% UI, 22.2-24.9 million) new cancer cases (17.2 million when excluding nonmelanoma skin cancer) and 10.0 million (95% UI, 9.36-10.6 million) cancer deaths globally, with an estimated 250 million (235-264 million) DALYs due to cancer. Since 2010, these represented a 26.3% (95% UI, 20.3%-32.3%) increase in new cases, a 20.9% (95% UI, 14.2%-27.6%) increase in deaths, and a 16.0% (95% UI, 9.3%-22.8%) increase in DALYs. Among 22 groups of diseases and injuries in the GBD 2019 study, cancer was second only to cardiovascular diseases for the number of deaths, years of life lost, and DALYs globally in 2019. Cancer burden differed across SDI quintiles. The proportion of years lived with disability that contributed to DALYs increased with SDI, ranging from 1.4% (1.1%-1.8%) in the low SDI quintile to 5.7% (4.2%-7.1%) in the high SDI quintile. While the high SDI quintile had the highest number of new cases in 2019, the middle SDI quintile had the highest number of cancer deaths and DALYs. From 2010 to 2019, the largest percentage increase in the numbers of cases and deaths occurred in the low and low-middle SDI quintiles. The results of this systematic analysis suggest that the global burden of cancer is substantial and growing, with burden differing by SDI. These results provide comprehensive and comparable estimates that can potentially inform efforts toward equitable cancer control around the world.Funding/Support: The Institute for Health Metrics and Evaluation received funding from the Bill & Melinda Gates Foundation and the American Lebanese Syrian Associated Charities. Dr Aljunid acknowledges the Department of Health Policy and Management of Kuwait University and the International Centre for Casemix and Clinical Coding, National University of Malaysia for the approval and support to participate in this research project. Dr Bhaskar acknowledges institutional support from the NSW Ministry of Health and NSW Health Pathology. Dr Bärnighausen was supported by the Alexander von Humboldt Foundation through the Alexander von Humboldt Professor award, which is funded by the German Federal Ministry of Education and Research. Dr Braithwaite acknowledges funding from the National Institutes of Health/ National Cancer Institute. Dr Conde acknowledges financial support from the European Research Council ERC Starting Grant agreement No 848325. Dr Costa acknowledges her grant (SFRH/BHD/110001/2015), received by Portuguese national funds through Fundação para a Ciência e Tecnologia, IP under the Norma Transitória grant DL57/2016/CP1334/CT0006. Dr Ghith acknowledges support from a grant from Novo Nordisk Foundation (NNF16OC0021856). Dr Glasbey is supported by a National Institute of Health Research Doctoral Research Fellowship. Dr Vivek Kumar Gupta acknowledges funding support from National Health and Medical Research Council Australia. Dr Haque thanks Jazan University, Saudi Arabia for providing access to the Saudi Digital Library for this research study. Drs Herteliu, Pana, and Ausloos are partially supported by a grant of the Romanian National Authority for Scientific Research and Innovation, CNDS-UEFISCDI, project number PN-III-P4-ID-PCCF-2016-0084. Dr Hugo received support from the Higher Education Improvement Coordination of the Brazilian Ministry of Education for a sabbatical period at the Institute for Health Metrics and Evaluation, between September 2019 and August 2020. Dr Sheikh Mohammed Shariful Islam acknowledges funding by a National Heart Foundation of Australia Fellowship and National Health and Medical Research Council Emerging Leadership Fellowship. Dr Jakovljevic acknowledges support through grant OI 175014 of the Ministry of Education Science and Technological Development of the Republic of Serbia. Dr Katikireddi acknowledges funding from a NHS Research Scotland Senior Clinical Fellowship (SCAF/15/02), the Medical Research Council (MC_UU_00022/2), and the Scottish Government Chief Scientist Office (SPHSU17). Dr Md Nuruzzaman Khan acknowledges the support of Jatiya Kabi Kazi Nazrul Islam University, Bangladesh. Dr Yun Jin Kim was supported by the Research Management Centre, Xiamen University Malaysia (XMUMRF/2020-C6/ITCM/0004). Dr Koulmane Laxminarayana acknowledges institutional support from Manipal Academy of Higher Education. Dr Landires is a member of the Sistema Nacional de Investigación, which is supported by Panama’s Secretaría Nacional de Ciencia, Tecnología e Innovación. Dr Loureiro was supported by national funds through Fundação para a Ciência e Tecnologia under the Scientific Employment Stimulus–Institutional Call (CEECINST/00049/2018). Dr Molokhia is supported by the National Institute for Health Research Biomedical Research Center at Guy’s and St Thomas’ National Health Service Foundation Trust and King’s College London. Dr Moosavi appreciates NIGEB's support. Dr Pati acknowledges support from the SIAN Institute, Association for Biodiversity Conservation & Research. Dr Rakovac acknowledges a grant from the government of the Russian Federation in the context of World Health Organization Noncommunicable Diseases Office. Dr Samy was supported by a fellowship from the Egyptian Fulbright Mission Program. Dr Sheikh acknowledges support from Health Data Research UK. Drs Adithi Shetty and Unnikrishnan acknowledge support given by Kasturba Medical College, Mangalore, Manipal Academy of Higher Education. Dr Pavanchand H. Shetty acknowledges Manipal Academy of Higher Education for their research support. Dr Diego Augusto Santos Silva was financed in part by the Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - Brasil Finance Code 001 and is supported in part by CNPq (302028/2018-8). Dr Zhu acknowledges the Cancer Prevention and Research Institute of Texas grant RP210042

Environmental effects on local adaptation, genetic connectivity and morphology of generalist (Phaulacridium) versus specialist (Kosciuscola) Australian grasshoppers

Thesis by publication.Includes bibliographical references.Chapter 1. General introduction -- Chapter 2. Morphological variation tracks environmental gradients in an agricultural pest, Phaulacridium vittatum (Orthoptera: Acrididae) -- Chapter 3. Detection of environmental and morphological adaptation despite high landscape genetic connectivity in a pest grasshopper (Phaulacridium vittatum) -- Chapter 4. Elevational partitioning in species distribution, abundance and body size in Australian alpine grasshoppers (Kosciuscola) -- Chapter 5. Selection signatures associate with elevational niche in two co-occuring alpine grasshoppers (genus Kosciuscola) -- Chapter 6. General discussion -- AppendicesEnvironmental variables can exert strong effects on a species' morphology, neutral, and adaptive genetic variation. Understanding how environmental variables affect species' genetic connectivity and adaptive genetic responses has implications for conserving species subject to climate change and habitat fragmentation. With field data, statistical modelling and a landscape genomics approach applied to endemic Australian grasshoppers, I compare how patterns of morphology, abundance, gene flow and selection interact in a generalist grasshopper, Phaulacridium vittatum, versus three specialist grasshoppers of the genus Kosciuscola (K.usitatus, K. tristis, and K. cognatus), restricted to alpine regions. Single nucleotide polymorphism (SNP) data from double digest restriction-site associated (ddRAD) DNA sequencing was obtained for P. vittatum, K. usitatus and K. tristis. For P. vittatum, I identified a positive effect of solar radiation on body size and stripe polymorphism, with increasing Foliage Projective Cover (FPC) associated with the presence of winged individuals. Furthermore,latitude, soil moisture, wind speed and FPC were significantly correlated with relative abundance. Mean annual temperature had a stronger positive non-linear effect on genetic connectivity compared to land cover, and despite high gene flow across the 900 km sampling gradient, Environment Association Analysis (EAA) detected signatures of selection in relation to mean annual temperature, latitude and body size. Candidate adaptive SNPs were annotated to gene functions for olfaction, metabolic detoxification and ultra-violet shielding that may be important for environmental adaptation. For the three specialist Kosciuscola grasshopper species, the relative abundance of K. usitatus and K. tristis changed differentially and significantly with elevation, and the relative abundance of K. cognatus changed significantly with FPC. Body sizechanges were observed with increasing elevation that differed within sexes and across species.EAA analysis of SNP data for K. usitatus and K. tristis indicated that climatic variables including elevation (used as a proxy for temperature due to its high correlation), precipitation seasonality and number of frost days were more strongly associated with selection signatures in both species compared to soil or terrain variables. However, K. tristis, with a narrow elevational niche and lower cold tolerance, showed stronger genetic structure and more pronounced signatures of local adaptation compared to the more widely found K. usitatus. Some candidate loci putatively underselection were shared by both species with a greater number associated with elevation, indicating the likelihood of parallel adaptation driven by climatic variables. The highest number of candidate outlier loci were annotated to genes involved in lipid metabolism and development.The study suggests that species with wider environmental niches are likely to maintain higher gene flow and exhibit weaker signatures of selection than species with narrower niche breadths.Furthermore, co-occurring species encountering similar environmental challenges may show parallel adaptation. Taken together, this thesis demonstrates that generalist species are more likely to successfully move and adapt under shifting environments due to land use or climate change than specialist species occupying narrow thermal environments -- summary.Mode of access: Internet.1 online resource (261 pages