3,510 research outputs found
A configuration system for the ATLAS trigger
The ATLAS detector at CERN's Large Hadron Collider will be exposed to
proton-proton collisions from beams crossing at 40 MHz that have to be reduced
to the few 100 Hz allowed by the storage systems. A three-level trigger system
has been designed to achieve this goal. We describe the configuration system
under construction for the ATLAS trigger chain. It provides the trigger system
with all the parameters required for decision taking and to record its history.
The same system configures the event reconstruction, Monte Carlo simulation and
data analysis, and provides tools for accessing and manipulating the
configuration data in all contexts.Comment: 4 pages, 2 figures, contribution to the Conference on Computing in
High Energy and Nuclear Physics (CHEP06), 13.-17. Feb 2006, Mumbai, Indi
Functional microRNA generated from a cytoplasmic RNA virus
MicroRNAs (miRNAs) are a class of small, non-coding RNAs that play a pivotal role in the regulation of posttranscriptional gene expression in a wide range of eukaryotic organisms. Although DNA viruses have been shown to encode miRNAs and exploit the cellular RNA silencing machinery as a convenient way to regulate viral and host gene expression, it is generally believed that this pathway is not available to RNA viruses that replicate in the cytoplasm of the cell because miRNA biogenesis is initiated in the nucleus. In fact, among the >200 viral miRNAs that have been experimentally verified so far, none is derived from an RNA virus. Here, we show that a cytoplasmic RNA virus can indeed encode and produce a functional miRNA. We introduced a heterologous miRNA-precursor stem-loop sequence element into the RNA genome of the flavivirus tick-borne encephalitis virus, and this led to the production of a functional miRNA during viral infection without impairing viral RNA replication. These findings demonstrate that miRNA biogenesis can be used by cytoplasmic RNA viruses to produce regulatory molecules for the modulation of the transcriptome
The Configuration System of the ATLAS Trigger
The ATLAS detector at CERN’s LHC will be exposed to proton-proton collisions at a rate of 40 MHz. To reduce the data rate to a manageable final output rate of 200Hz, only potentially interesting events are selected by a three-level trigger system. A system has been designed and implemented that enables the configuration of all three trigger levels from a centrally maintained relational database, for the purpose of both online data taking and offline trigger simulation. We present the current status of this trigger configuration system, covering the database design, client software and user interface tools, and putting emphasis on its multiple uses for data-taking, Monte-Carlo simulation, and trigger validation on express-stream data
The TriggerTool Graphical User Interface to the ATLAS Trigger Configuration Database
A system has been designed and implemented to configure all three levels of the ATLAS trigger system from a centrally provided relational database, in which an archive of all trigger configurations used in data taking is also maintained. The user interaction with this database is via a Java-based graphical user interface known as the TriggerTool. We describe here how the TriggerTool has been designed to fulfill several different roles for users of varying expertise, from being a browser of the database to a tool for creating and modifying configuration
The relationships between West Nile and Kunjin viruses.
Until recently, West Nile (WN) and Kunjin (KUN) viruses were classified as distinct types in the Flavivirus genus. However, genetic and antigenic studies on isolates of these two viruses indicate that the relationship between them is more complex. To better define this relationship, we performed sequence analyses on 32 isolates of KUN virus and 28 isolates of WN virus from different geographic areas, including a WN isolate from the recent outbreak in New York. Sequence comparisons showed that the KUN virus isolates from Australia were tightly grouped but that the WN virus isolates exhibited substantial divergence and could be differentiated into four distinct groups. KUN virus isolates from Australia were antigenically homologous and distinct from the WN isolates and a Malaysian KUN virus. Our results suggest that KUN and WN viruses comprise a group of closely related viruses that can be differentiated into subgroups on the basis of genetic and antigenic analyses
TESLA Technical Design Report Part III: Physics at an e+e- Linear Collider
The TESLA Technical Design Report Part III: Physics at an e+e- Linear
ColliderComment: 192 pages, 131 figures. Some figures have reduced quality. Full
quality figures can be obtained from http://tesla.desy.de/tdr. Editors -
R.-D. Heuer, D.J. Miller, F. Richard, P.M. Zerwa
Tests of model of color reconnection and a search for glueballs using gluon jets with a rapidity gap
Gluon jets with a mean energy of 22 GeV and purity of 95% are selected from
hadronic Z0 decay events produced in e+e- annihilations. A subsample of these
jets is identified which exhibits a large gap in the rapidity distribution of
particles within the jet. After imposing the requirement of a rapidity gap, the
gluon jet purity is 86%. These jets are observed to demonstrate a high degree
of sensitivity to the presence of color reconnection, i.e. higher order QCD
processes affecting the underlying color structure. We use our data to test
three QCD models which include a simulation of color reconnection: one in the
Ariadne Monte Carlo, one in the Herwig Monte Carlo, and the other by Rathsman
in the Pythia Monte Carlo. We find the Rathsman and Ariadne color reconnection
models can describe our gluon jet measurements only if very large values are
used for the cutoff parameters which serve to terminate the parton showers, and
that the description of inclusive Z0 data is significantly degraded in this
case. We conclude that color reconnection as implemented by these two models is
disfavored. The signal from the Herwig color reconnection model is less clear
and we do not obtain a definite conclusion concerning this model. In a separate
study, we follow recent theoretical suggestions and search for glueball-like
objects in the leading part of the gluon jets. No clear evidence is observed
for these objects.Comment: 42 pages, 18 figure
Scaling violations of quark and gluon jet fragmentation functions in e+e- annihilations at sqrt(s) = 91.2 and 183-209 GeV
Flavour inclusive, udsc and b fragmentation functions in unbiased jets, and
flavour inclusive, udsc, b and gluon fragmentation functions in biased jets are
measured in e+e- annihilations from data collected at centre-of-mass energies
of 91.2, and 183-209 GeV with the OPAL detector at LEP. The unbiased jets are
defined by hemispheres of inclusive hadronic events, while the biased jet
measurements are based on three-jet events selected with jet algorithms.
Several methods are employed to extract the fragmentation functions over a wide
range of scales. Possible biases are studied in the results are obtained. The
fragmentation functions are compared to results from lower energy e+e-
experiments and with earlier LEP measurements and are found to be consistent.
Scaling violations are observed and are found to be stronger for the
fragmentation functions of gluon jets than for those of quarks. The measured
fragmentation functions are compared to three recent theoretical
next-to-leading order calculations and to the predictions of three Monte Carlo
event generators. While the Monte Carlo models are in good agreement with the
data, the theoretical predictions fail to describe the full set of results, in
particular the b and gluon jet measurements.Comment: 46 pages, 17 figures, Submitted to Eur. Phys J.
Determination of alpha_s using Jet Rates at LEP with the OPAL detector
Hadronic events produced in e+e- collisions by the LEP collider and recorded
by the OPAL detector were used to form distributions based on the number of
reconstructed jets. The data were collected between 1995 and 2000 and
correspond to energies of 91 GeV, 130-136 GeV and 161-209 GeV. The jet rates
were determined using four different jet-finding algorithms (Cone, JADE, Durham
and Cambridge). The differential two-jet rate and the average jet rate with the
Durham and Cambridge algorithms were used to measure alpha(s) in the LEP energy
range by fitting an expression in which order alpah_2s calculations were
matched to a NLLA prediction and fitted to the data. Combining the measurements
at different centre-of-mass energies, the value of alpha_s (Mz) was determined
to be
alpha(s)(Mz)=0.1177+-0.0006(stat.)+-0.0012$(expt.)+-0.0010(had.)+-0.0032(theo.)
\.Comment: 40 pages, 17 figures, Submitted to Euro. Phys. J.
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