Infants Prefer Female Body Phenotypes; Infant Girls Prefer They Have an Hourglass Shape

Adolescents and adults show preferences for male and female body shapes consistent with evolutionary theories of reproductive fitness and mate selection. However, when these preferences for females with narrow waists (i.e., 0.7 waist-to-hip ratio) and men with broad shoulders (i.e., mesomorphic body shape) emerge during the lifespan is largely unknown. To address this knowledge gap, eye-movements were tracked in 144 infants (3 to 18 months of age) during computer presentation of three-dimensional human figures varying in body features thought relevant for reproductive success (e.g., secondary sex characteristics, waist-to-hip ratio). When presented with pairs of figures differing in apparent sex, male and female infants looked significantly longer at the female figure compared to the male figure, a new finding that extends previous research showing preferences for female faces in infancy. When presented with same-sex figures differing in characteristics associated with mate value, male and female infants looked longer at a low mate value male (i.e., an endomorphic body type) compared to a high mate value male (i.e., a mesomorphic body type), a finding that replicates the results of previous research. In addition, the novel use of high and low mate value female figures showed a sex difference in visual attention, such that female infants looked longer at the high mate value female figure compared to the low mate female figure whereas male infants showed the opposite pattern of results. In sum, these findings suggest that infants generally do not possess preferences for adult-defined attractive male body shapes. However, infant girls’ greater attention to a female figure with an adult-preferred waist-to-hip ratio raises the possibility that evolved preferences for 0.7 waist-to-hip ratio influence girls’ later preference for toys representing females with an hourglass shape, perhaps supporting elaboration of adult social behaviors that enhance reproductive success (e.g., cooperative breeding)

Exploring the feasibility of tensor decomposition for analysis of fNIRS signals: a comparative study with grand averaging method

The analysis of functional near-infrared spectroscopy (fNIRS) signals has not kept pace with the increased use of fNIRS in the behavioral and brain sciences. The popular grand averaging method collapses the oxygenated hemoglobin data within a predefined time of interest window and across multiple channels within a region of interest, potentially leading to a loss of important temporal and spatial information. On the other hand, the tensor decomposition method can reveal patterns in the data without making prior assumptions of the hemodynamic response and without losing temporal and spatial information. The aim of the current study was to examine whether the tensor decomposition method could identify significant effects and novel patterns compared to the commonly used grand averaging method for fNIRS signal analysis. We used two infant fNIRS datasets and applied tensor decomposition (i.e., canonical polyadic and Tucker decompositions) to analyze the significant differences in the hemodynamic response patterns across conditions. The codes are publicly available on GitHub. Bayesian analyses were performed to understand interaction effects. The results from the tensor decomposition method replicated the findings from the grand averaging method and uncovered additional patterns not detected by the grand averaging method. Our findings demonstrate that tensor decomposition is a feasible alternative method for analyzing fNIRS signals, offering a more comprehensive understanding of the data and its underlying patterns

The association of lung function and St. George's respiratory questionnaire with exacerbations in COPD: a systematic literature review and regression analysis

Background This study investigated the relationship between changes in lung function (as measured by forced expiratory volume in one second [FEV1]) and the St. George’s Respiratory Questionnaire (SGRQ) and economically significant outcomes of exacerbations and health resource utilization, with an aim to provide insight into whether the effects of COPD treatment on lung function and health status relate to a reduced risk for exacerbations. Methods A systematic literature review was conducted in MEDLINE, Embase, and the Cochrane Central Register of Controlled Trials to identify randomized controlled trials of adult COPD patients published in English since 2002 in order to relate mean change in FEV1 and SGRQ total score to exacerbations and hospitalizations. These predictor/outcome pairs were analyzed using sample-size weighted regression analyses, which estimated a regression slope relating the two treatment effects, as well as a confidence interval and a test of statistical significance. Results Sixty-seven trials were included in the analysis. Significant relationships were seen between: FEV1 and any exacerbation (time to first exacerbation or patients with at least one exacerbation, p = 0.001); between FEV1 and moderate-to-severe exacerbations (time to first exacerbation, patients with at least one exacerbation, or annualized rate, p = 0.045); between SGRQ score and any exacerbation (time to first exacerbation or patients with at least one exacerbation, p = 0.0002) and between SGRQ score and moderate-to-severe exacerbations (time to first exacerbation or patients with at least one exacerbation, p = 0.0279; annualized rate, p = 0.0024). Relationships between FEV1 or SGRQ score and annualized exacerbation rate for any exacerbation or hospitalized exacerbations were not significant. Conclusions The regression analysis demonstrated a significant association between improvements in FEV1 and SGRQ score and lower risk for COPD exacerbations. Even in cases of non-significant relationships, results were in the expected direction with few exceptions. The results of this analysis offer health care providers and payers a broader picture of the relationship between exacerbations and mean change in FEV1 as well as SGRQ score, and will help inform clinical and formulary-making decisions while stimulating new research questions for future prospective studies

Nkx2.2 and Arx genetically interact to regulate pancreatic endocrine cell development and endocrine hormone expression

AbstractNkx2.2 and Arx are essential pancreatic transcription factors. Nkx2.2 is necessary for the appropriate specification of the islet alpha, beta, PP and epsilon cell lineages, whereas Arx is required to form the correct ratio of alpha, beta, delta and PP cells. To begin to understand the cooperative functions of Nkx2.2 and Arx in the development of endocrine cell lineages, we generated progenitor cell-specific deletions of Arx on the Nkx2.2 null background. The analysis of these mutants demonstrates that expansion of the ghrelin cell population in the Nkx2.2 null pancreas is not dependent on Arx; however, Arx is necessary for the upregulation of ghrelin mRNA levels in Nkx2.2 mutant epsilon cells. Alternatively, in the absence of Arx, delta cell numbers are increased and Nkx2.2 becomes essential for the repression of somatostatin gene expression. Interestingly, the dysregulation of ghrelin and somatostatin expression in the Nkx2.2/Arx compound mutant (Nkx2.2null;ArxΔpanc) results in the appearance of ghrelin+/somatostatin+ co-expressing cells. These compound mutants also revealed a genetic interaction between Nkx2.2 and Arx in the regulation of the PP cell lineage; the PP cell population is reduced when Nkx2.2 is deleted but is restored back to wildtype numbers in the Nkx2.2null;ArxΔpanc mutant. Moreover, conditional deletion of Arx in specific pancreatic cell populations established that the functions of Arx are necessary in the Neurog3+ endocrine progenitors. Together, these experiments identify novel genetic interactions between Nkx2.2 and Arx within the endocrine progenitor cells that ensure the correct specification and regulation of endocrine hormone-producing cells

Backflow air and pressure analysis in emptying a pipeline containing an entrapped air pocket

[EN] The prediction of the pressure inside the air pocket in water pipelines has been the topic for a lot of research works. Several aspects in this field have been discussed, such as the filling and the emptying procedures. The emptying process can affect the safety and the efficiency of water systems. Current research presents an analysis of the emptying process using experimental and computational results. The phenomenon is simulated using the two-dimensional computational fluid dynamics (2D CFD) and the one-dimensional mathematical (1D) models. A backflow air analysis is also provided based on CFD simulations. The developed models show good ability in the prediction of the sub-atmospheric pressure and the flow velocity in the system. In most of the cases, the 1D and 2D CFD models show similar performance in the prediction of the pressure and the velocity results. The backflow air development can be accurately explained using the CFD model.This work was supported by the Fundação para a Ciência e a Tecnologia (FCT), Portugal under grant number PD/BD/114459/2016.Besharat, M.; Coronado-Hernández, OE.; Fuertes-Miquel, VS.; Viseu, MT.; Ramos, HM. (2018). Backflow air and pressure analysis in emptying a pipeline containing an entrapped air pocket. Urban Water Journal. 15(8):769-779. https://doi.org/10.1080/1573062X.2018.1540711S769779158Benjamin, T. B. (1968). Gravity currents and related phenomena. Journal of Fluid Mechanics, 31(2), 209-248. doi:10.1017/s0022112068000133Besharat, M., Teresa Viseu, M., & Ramos, H. (2017). Experimental Study of Air Vessel Behavior for Energy Storage or System Protection in Water Hammer Events. Water, 9(1), 63. doi:10.3390/w9010063Besharat, M., Tarinejad, R., & Ramos, H. M. (2015). The effect of water hammer on a confined air pocket towards flow energy storage system. Journal of Water Supply: Research and Technology-Aqua, 65(2), 116-126. doi:10.2166/aqua.2015.081Besharat, M., Tarinejad, R., Aalami, M. T., & Ramos, H. M. (2016). Study of a Compressed Air Vessel for Controlling the Pressure Surge in Water Networks: CFD and Experimental Analysis. Water Resources Management, 30(8), 2687-2702. doi:10.1007/s11269-016-1310-1Coronado-Hernández, O., Fuertes-Miquel, V., Besharat, M., & Ramos, H. (2017). Experimental and Numerical Analysis of a Water Emptying Pipeline Using Different Air Valves. Water, 9(2), 98. doi:10.3390/w9020098Coronado-Hernández, O. E., Fuertes-Miquel, V. S., Besharat, M., & Ramos, H. M. (2018). Subatmospheric pressure in a water draining pipeline with an air pocket. Urban Water Journal, 15(4), 346-352. doi:10.1080/1573062x.2018.1475578Edmunds, R. C. (1979). Air Binding in Pipes. Journal - American Water Works Association, 71(5), 272-277. doi:10.1002/j.1551-8833.1979.tb04348.xEscarameia, M. (2007). Investigating hydraulic removal of air from water pipelines. Proceedings of the Institution of Civil Engineers - Water Management, 160(1), 25-34. doi:10.1680/wama.2007.160.1.25Izquierdo, J., Fuertes, V. S., Cabrera, E., Iglesias, P. L., & Garcia-Serra, J. (1999). Pipeline start-up with entrapped air. Journal of Hydraulic Research, 37(5), 579-590. doi:10.1080/00221689909498518Kader, B. A. (1981). Temperature and concentration profiles in fully turbulent boundary layers. International Journal of Heat and Mass Transfer, 24(9), 1541-1544. doi:10.1016/0017-9310(81)90220-9Laanearu, J., Annus, I., Koppel, T., Bergant, A., Vučković, S., Hou, Q., … van’t Westende, J. M. C. (2012). Emptying of Large-Scale Pipeline by Pressurized Air. Journal of Hydraulic Engineering, 138(12), 1090-1100. doi:10.1061/(asce)hy.1943-7900.0000631Leon, A. S., Ghidaoui, M. S., Schmidt, A. R., & Garcia, M. H. (2010). A robust two-equation model for transient-mixed flows. Journal of Hydraulic Research, 48(1), 44-56. doi:10.1080/00221680903565911Martins, N. M. C., Delgado, J. N., Ramos, H. M., & Covas, D. I. C. (2017). Maximum transient pressures in a rapidly filling pipeline with entrapped air using a CFD model. Journal of Hydraulic Research, 55(4), 506-519. doi:10.1080/00221686.2016.1275046Martins, S. C., Ramos, H. M., & Almeida, A. B. (2015). Conceptual analogy for modelling entrapped air action in hydraulic systems. Journal of Hydraulic Research, 53(5), 678-686. doi:10.1080/00221686.2015.1077353Pozos, O., Gonzalez, C. A., Giesecke, J., Marx, W., & Rodal, E. A. (2010). Air entrapped in gravity pipeline systems. Journal of Hydraulic Research, 48(3), 338-347. doi:10.1080/00221686.2010.481839Ramezani, L., Karney, B., & Malekpour, A. (2016). Encouraging Effective Air Management in Water Pipelines: A Critical Review. Journal of Water Resources Planning and Management, 142(12), 04016055. doi:10.1061/(asce)wr.1943-5452.0000695Richards, R. T. (1962). Air Binding in Water Pipelines. Journal - American Water Works Association, 54(6), 719-730. doi:10.1002/j.1551-8833.1962.tb00883.xTijsseling, A. S., Hou, Q., Bozkuş, Z., & Laanearu, J. (2015). Improved One-Dimensional Models for Rapid Emptying and Filling of Pipelines. Journal of Pressure Vessel Technology, 138(3). doi:10.1115/1.4031508Triki, A. (2015). Water-hammer control in pressurized-pipe flow using an in-line polymeric short-section. Acta Mechanica, 227(3), 777-793. doi:10.1007/s00707-015-1493-1Vasconcelos, J. G., & Wright, S. J. (2008). Rapid Flow Startup in Filled Horizontal Pipelines. Journal of Hydraulic Engineering, 134(7), 984-992. doi:10.1061/(asce)0733-9429(2008)134:7(984)Wang, H., Zhou, L., Liu, D., Karney, B., Wang, P., Xia, L., … Xu, C. (2016). CFD Approach for Column Separation in Water Pipelines. Journal of Hydraulic Engineering, 142(10), 04016036. doi:10.1061/(asce)hy.1943-7900.0001171Zhou, F., Hicks, F. E., & Steffler, P. M. (2002). Transient Flow in a Rapidly Filling Horizontal Pipe Containing Trapped Air. Journal of Hydraulic Engineering, 128(6), 625-634. doi:10.1061/(asce)0733-9429(2002)128:6(625)Zhou, L., Liu, D., & Karney, B. (2013). Investigation of Hydraulic Transients of Two Entrapped Air Pockets in a Water Pipeline. Journal of Hydraulic Engineering, 139(9), 949-959. doi:10.1061/(asce)hy.1943-7900.0000750Zhou, L., Liu, D., & Ou, C. (2011). Simulation of Flow Transients in a Water Filling Pipe Containing Entrapped Air Pocket with VOF Model. Engineering Applications of Computational Fluid Mechanics, 5(1), 127-140. doi:10.1080/19942060.2011.11015357Zhou, L., Wang, H., Karney, B., Liu, D., Wang, P., & Guo, S. (2018). Dynamic Behavior of Entrapped Air Pocket in a Water Filling Pipeline. Journal of Hydraulic Engineering, 144(8), 04018045. doi:10.1061/(asce)hy.1943-7900.0001491Zukoski, E. E. (1966). Influence of viscosity, surface tension, and inclination angle on motion of long bubbles in closed tubes. 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Shortness of Breath with Daily Activities questionnaire: validation and responder thresholds in patients with chronic obstructive pulmonary disease

ObjectivesTo test the reliability, validity and responsiveness of the 13-item Shortness of Breath with Daily Activities (SOBDA) questionnaire, and determine the threshold for response and minimal important difference (MID).Design6 week, randomised, double-blind, placebo-controlled study.Setting40 centres in the USA between 29 October 2009 and 1 July 2010.Primary and secondary outcome measures547 patients with chronic obstructive pulmonary disease (COPD) were enrolled and 418 entered the 2-week run-in period. Data from the run-in period were collected to test internal consistency, test–retest reliability, convergent validity and known-groups validity of the SOBDA. Three hundred and sixty six patients were randomised 2:2:1 to fluticasone propionate/salmeterol 250/50 µg, salmeterol 50 µg or placebo, twice daily. Results from the SOBDA questionnaire, Patient Global Assessment of Change Question, modified Medical Research Council Dyspnoea Scale (mMRC), Clinician Global Impression of Dysponea Severity (CGI-S), Clinician Global Impression of Change Question and Chronic Respiratory Disease Questionnaire self-administered standardised version (CRQ-SAS) were evaluated; spirometry and safety parameters were measured. Study endpoints were selected to investigate the cross-sectional and longitudinal validity of the SOBDA questionnaire in relation to the clinical criteria.ResultsInternal consistency of the SOBDA questionnaire (Cronbach α) was 0.89. Test–retest reliability (intraclass correlation) was 0.94. The SOBDA weekly scores correlated with the patient-reported and clinician-reported mMRC, CGI-S and CRQ-SAS dyspnoea domain scores (0.29, 0.24, 0.24 and –0.68, respectively). The SOBDA weekly scores differentiated between the responders and the non-responders as rated by the patients and the clinicians. Anchor-based and supportive distribution-based analyses produced a range of the potential values for the threshold for the responders and MID.ConclusionsThe 13-item SOBDA questionnaire is reliable, valid and responsive to change in patients with COPD. On using anchor-based methods, the proposed responder threshold shows a −0.1 to −0.2 score change. A specific threshold value will be identified as more data are generated from future clinical trials.Trial registrationNCT00984659; GlaxoSmithKline study number: ASQ112989

Prevalence and characteristics of progressive fibrosing interstitial lung disease in a prospective registry

Rationale Progressive fibrosing interstitial lung disease (PF-ILD) is characterized by progressive physiologic, symptomatic, and/or radiographic worsening. The real-world prevalence and characteristics of PF-ILD remain uncertain. Methods Patients were enrolled from the Canadian Registry for Pulmonary Fibrosis between 2015-2020. PF-ILD was defined as a relative forced vital capacity (FVC) decline ≥10%, death, lung transplantation, or any 2 of: relative FVC decline ≥5 and <10%, worsening respiratory symptoms, or worsening fibrosis on computed tomography of the chest, all within 24 months of diagnosis. Time-to-event analysis compared progression between key diagnostic subgroups. Characteristics associated with progression were determined by multivariable regression. Results Of 2,746 patients with fibrotic ILD (mean age 65±12 years, 51% female), 1,376 (50%) met PFILD criteria in the first 24 months of follow-up. PF-ILD occurred in 427 (59%) patients with idiopathic pulmonary fibrosis (IPF), 125 (58%) with fibrotic hypersensitivity pneumonitis (HP), 281 (51%) with unclassifiable ILD (U-ILD), and 402 (45%) with connective tissue diseaseassociated ILD (CTD-ILD). Compared to IPF, time to progression was similar in patients with HP (hazard ratio [HR] 0.96, 95% confidence interval, CI 0.79-1.17), but was delayed in patients with U-ILD (HR 0.82, 95% CI 0.71-0.96) and CTD-ILD (HR 0.65, 95% CI 0.56-0.74). Background treatment varied across diagnostic subtypes with 66% of IPF patients receiving antifibrotic therapy, while immunomodulatory therapy was utilized in 49%, 61%, and 37% of patients with CHP, CTD-ILD, and U-ILD respectively. Increasing age, male sex, gastroesophageal reflux disease, and lower baseline pulmonary function were independently associated with progression. Interpretation Progression is common in patients with fibrotic ILD, and is similarly prevalent in HP and IPF. Routinely collected variables help identify patients at risk for progression and may guide therapeutic strategie

Variants in autophagy-related genes and clinical characteristics in melanoma: a population-based study

Autophagy has been linked with melanoma risk and survival, but no polymorphisms in autophagy-related (ATG) genes have been investigated in relation to melanoma progression. We examined five single-nucleotide polymorphisms (SNPs) in three ATG genes (ATG5; ATG10; and ATG16L) with known or suspected impact on autophagic flux in an international population-based case-control study of melanoma. DNA from 911 melanoma patients was genotyped. An association was identified between (GG) (rs2241880) and earlier stage at diagnosis (OR 0.47; 95% Confidence Intervals (CI) = 0.27-0.81, P = 0.02) and a decrease in Breslow thickness (P = 0.03). The ATG16L heterozygous genotype (AG) (rs2241880) was associated with younger age at diagnosis (P = 0.02). Two SNPs in ATG5 were found to be associated with increased stage (rs2245214 CG, OR 1.47; 95% CI = 1.11-1.94, P = 0.03; rs510432 CC, OR 1.84; 95% CI = 1.12-3.02, P = 0.05). Finally, we identified inverse associations between ATG5 (GG rs2245214) and melanomas on the scalp or neck (OR 0.20, 95% CI = 0.05-0.86, P = 0.03); ATG10 (CC) (rs1864182) and brisk tumor infiltrating lymphocytes (TILs) (OR 0.42; 95% CI = 0.21-0.88, P = 0.02), and ATG5 (CC) (rs510432) with nonbrisk TILs (OR 0.55; 95% CI = 0.34-0.87, P = 0.01). Our data suggest that ATG SNPs might be differentially associated with specific host and tumor characteristics including age at diagnosis, TILs, and stage. These associations may be critical to understanding the role of autophagy in cancer, and further investigation will help characterize the contribution of these variants to melanoma progression

A View from the Past Into our Collective Future: The Oncofertility Consortium Vision Statement

Today, male and female adult and pediatric cancer patients, individuals transitioning between gender identities, and other individuals facing health extending but fertility limiting treatments can look forward to a fertile future. This is, in part, due to the work of members associated with the Oncofertility Consortium. The Oncofertility Consortium is an international, interdisciplinary initiative originally designed to explore the urgent unmet need associated with the reproductive future of cancer survivors. As the strategies for fertility management were invented, developed or applied, the individuals for who the program offered hope, similarly expanded. As a community of practice, Consortium participants share information in an open and rapid manner to addresses the complex health care and quality-of-life issues of cancer, transgender and other patients. To ensure that the organization remains contemporary to the needs of the community, the field designed a fully inclusive mechanism for strategic planning and here present the findings of this process. This interprofessional network of medical specialists, scientists, and scholars in the law, medical ethics, religious studies and other disciplines associated with human interventions, explore the relationships between health, disease, survivorship, treatment, gender and reproductive longevity. The goals are to continually integrate the best science in the service of the needs of patients and build a community of care that is ready for the challenges of the field in the future

Allele-Specific HLA Loss and Immune Escape in Lung Cancer Evolution

Immune evasion is a hallmark of cancer. Losing the ability to present neoantigens through human leukocyte antigen (HLA) loss may facilitate immune evasion. However, the polymorphic nature of the locus has precluded accurate HLA copy-number analysis. Here, we present loss of heterozygosity in human leukocyte antigen (LOHHLA), a computational tool to determine HLA allele-specific copy number from sequencing data. Using LOHHLA, we find that HLA LOH occurs in 40% of non-small-cell lung cancers (NSCLCs) and is associated with a high subclonal neoantigen burden, APOBEC-mediated mutagenesis, upregulation of cytolytic activity, and PD-L1 positivity. The focal nature of HLA LOH alterations, their subclonal frequencies, enrichment in metastatic sites, and occurrence as parallel events suggests that HLA LOH is an immune escape mechanism that is subject to strong microenvironmental selection pressures later in tumor evolution. Characterizing HLA LOH with LOHHLA refines neoantigen prediction and may have implications for our understanding of resistance mechanisms and immunotherapeutic approaches targeting neoantigens. Video Abstract [Figure presented] Development of the bioinformatics tool LOHHLA allows precise measurement of allele-specific HLA copy number, improves the accuracy in neoantigen prediction, and uncovers insights into how immune escape contributes to tumor evolution in non-small-cell lung cancer