Individual behavioural responses of an intermediate host to a manipulative acanthocephalan parasite and the effects of intra-specific parasite competition

© 2018 Timo Thünken. Background: Parasites with complex life cycles depend on the ingestion of their intermediate host by the final host. To complete their life cycle successfully, parasites frequently manipulate the behaviour and appearance of the intermediate host. Within host–parasite systems, there is considerable variation in the intermediate host’s behavioural response to infection. Aim: Identify sources of parasite-induced variation in intermediate hosts’ traits by focusing on intra- and inter-individual variation in behavioural responses to parasitic manipulation, taking infection intensity – and thus parasitic competition – into account. Organism: The acanthocephalan parasite Polymorphus minutus, which alters the phototactic behaviour and activity of its intermediate host, Gammarus pulex, thereby increasing the probability of being eaten by the final host. Methods: We repeatedly examined the behaviour of individual G. pulex varying in intensity of infection with P. minutus from uninfected to multiple-infected. We analysed phototactic responses and activity. Results and conclusions: Individual gammarids differed in phototactic behaviour and in activity patterns, with repeatability ranging from 20% to 50%. Infected gammarids showed greater between-individual variation in phototaxis but not activity than uninfected gammarids. All uninfected gammarids were photophobic, whereas the phototactic behaviour of infected gammarids ranged from photophobia to photophilia. On average, multiple-infected gammarids were similarly photophobic as uninfected ones. Single-infected gammarids were less photophobic than uninfected and multiple-infected conspecifics. This suggests that intra-specific parasitic competition affects the manipulative abilities of parasites. Both groups of infected gammarids were on average less active than uninfected ones, and this effect was mainly driven by some infected individuals. In conclusion, behavioural variation of gammarids was caused both by individual differences in responses to manipulation/infection, and by the reduced manipulative capacities of parasites facing intra-specific competition

Lagrangian bias in the local bias model

It is often assumed that the halo-patch fluctuation field can be written as a Taylor series in the initial Lagrangian dark matter density fluctuation field. We show that if this Lagrangian bias is local, and the initial conditions are Gaussian, then the two-point cross-correlation between halos and mass should be linearly proportional to the mass-mass auto-correlation function. This statement is exact and valid on all scales; there are no higher order contributions, e.g., from terms proportional to products or convolutions of two-point functions, which one might have thought would appear upon truncating the Taylor series of the halo bias function. In addition, the auto-correlation function of locally biased tracers can be written as a Taylor series in the auto-correlation function of the mass; there are no terms involving, e.g., derivatives or convolutions. Moreover, although the leading order coefficient, the linear bias factor of the auto-correlation function is just the square of that for the cross-correlation, it is the same as that obtained from expanding the mean number of halos as a function of the local density only in the large-scale limit. In principle, these relations allow simple tests of whether or not halo bias is indeed local in Lagrangian space. We discuss why things are more complicated in practice. We also discuss our results in light of recent work on the renormalizability of halo bias, demonstrating that it is better to renormalize than not. We use the Lognormal model to illustrate many of our findings.Comment: 14 pages, published on JCA

Relative humidity predominantly determines long‐term biocrust‐forming lichen cover in drylands under climate change

1. Manipulative experiments typically show a decrease in dryland biocrust cover and altered species composition under climate change. Biocrust‐forming lichens, such as the globally distributed Diploschistes diacapsis, are particularly affected and show a decrease in cover with simulated climate change. However, the underlying mechanisms are not fully understood, and long‐term interacting effects of different drivers are largely unknown due to the short‐term nature of the experimental studies conducted so far. 2. We addressed this gap and successfully parameterised a process‐based model for D. diacapsis to quantify how changing atmospheric CO2, temperature, rainfall amount and relative humidity affect its photosynthetic activity and cover. We also mimicked a long‐term manipulative climate change experiment to understand the mechanisms underlying observed patterns in the field. 3. The model reproduced observed experimental findings: warming reduced lichen cover, whereas less rainfall had no effect on lichen performance. This warming effect was caused by the associated decrease in relative humidity and non‐rainfall water inputs, which are major water sources for biocrust‐forming lichens. Warming alone, however, increased cover because higher temperatures promoted photosynthesis during early morning hours with high lichen activity. When combined, climate variables showed non‐additive effects on lichen cover, and effects of increased CO2 levelled off with decreasing levels of relative humidity. 4. Synthesis. Our results show that a decrease in relative humidity, rather than an increase in temperature, may be the key factor for the survival of the lichen D. diacapsis under climate change and that effects of increased CO2 levels might be offset by a reduction in non‐rainfall water inputs in the future. Because of a global trend towards warmer and drier air and the widespread global distribution of D. diacapsis, this will affect lichen‐dominated dryland biocrust communities and their role in regulating ecosystem functions worldwide.This research was supported by the Collaborative Research Centre 973 (www.sfb973.de) of the German Research Foundation (DFG) and by the European Research Council (grant agreement no. 647038 (BIODESERT)). P. Porada appreciates funding by Deutsche Forschungsgemeinschaft (DFG, German Research Foundation)—408092731. F.T. Maestre acknowledges support from Generalitat Valenciana (CIDEGENT/2018/041) and the Alexander Von Humboldt Foundation. J. Raggio acknowledges the ERA-Net BiodivERsA program as Soil Crust InterNational (SCIN) and The Spanish Ministerio de Economía y Competitividad (MINECO) project numbers PRI-PIMBDV-2011-0874 and CRYPTOCOVER, CTM2015-64728-C21-R

Implications of sampling design and sample size for national carbon accounting systems

<p>Abstract</p> <p>Background</p> <p>Countries willing to adopt a REDD regime need to establish a national Measurement, Reporting and Verification (MRV) system that provides information on forest carbon stocks and carbon stock changes. Due to the extensive areas covered by forests the information is generally obtained by sample based surveys. Most operational sampling approaches utilize a combination of earth-observation data and in-situ field assessments as data sources.</p> <p>Results</p> <p>We compared the cost-efficiency of four different sampling design alternatives (simple random sampling, regression estimators, stratified sampling, 2-phase sampling with regression estimators) that have been proposed in the scope of REDD. Three of the design alternatives provide for a combination of in-situ and earth-observation data. Under different settings of remote sensing coverage, cost per field plot, cost of remote sensing imagery, correlation between attributes quantified in remote sensing and field data, as well as population variability and the percent standard error over total survey cost was calculated. The cost-efficiency of forest carbon stock assessments is driven by the sampling design chosen. Our results indicate that the cost of remote sensing imagery is decisive for the cost-efficiency of a sampling design. The variability of the sample population impairs cost-efficiency, but does not reverse the pattern of cost-efficiency of the individual design alternatives.</p> <p>Conclusions, brief summary and potential implications</p> <p>Our results clearly indicate that it is important to consider cost-efficiency in the development of forest carbon stock assessments and the selection of remote sensing techniques. The development of MRV-systems for REDD need to be based on a sound optimization process that compares different data sources and sampling designs with respect to their cost-efficiency. This helps to reduce the uncertainties related with the quantification of carbon stocks and to increase the financial benefits from adopting a REDD regime.</p

Bias, redshift space distortions and primordial nongaussianity of nonlinear transformations: application to Lyman alpha forest

On large scales a nonlinear transformation of matter density field can be viewed as a biased tracer of the density field itself. A nonlinear transformation also modifies the redshift space distortions in the same limit, giving rise to a velocity bias. In models with primordial nongaussianity a nonlinear transformation generates a scale dependent bias on large scales. We derive analytic expressions for these for a general nonlinear transformation. These biases can be expressed entirely in terms of the one point distribution function (PDF) of the final field and the parameters of the transformation. Our analysis allows one to devise nonlinear transformations with nearly arbitrary bias properties, which can be used to increase the signal in the large scale clustering limit. We apply the results to the ionizing equilibrium model of Lyman-alpha forest, in which Lyman-alpha flux F is related to the density perturbation delta via a nonlinear transformation. Velocity bias can be expressed as an average over the Lyman-alpha flux PDF. At z=2.4 we predict the velocity bias of -0.1, compared to the observed value of -0.13 +/- 0.03. Bias and primordial nongaussianity bias depend on the parameters of the transformation. Measurements of bias can thus be used to constrain these parameters, and for reasonable values of the ionizing background intensity we can match the predictions to observations. Matching to the observed values we predict the ratio of primordial nongaussianity bias to bias to have the opposite sign and lower magnitude than the corresponding values for the highly biased galaxies, but this depends on the model parameters and can also vanish or change the sign.Comment: 18 pages, 1 figur

Impact of anion polarizability on ion pairing in microhydrated salt clusters

Despite longstanding interest in the mechanism of salt dissolution in aqueous media, a molecular level understanding remains incomplete. Here, cryogenic ion trap vibrational action spectroscopy is combined with electronic structure calculations to track salt hydration in a gas phase model system one water molecule at a time. The infrared photodissociation spectra of microhydrated lithium dihalide anions [LiXX′(H2O)n]- (XX′ = I2, ClI and Cl2; n = 1–3) in the OH stretching region (3800–2800 cm-1) provide a detailed picture of how anion polarizability influences the competition among ion–ion, ion–water and water–water interactions. While exclusively contact ion pairs are observed for n = 1, the formation of solvent-shared ion pairs, identified by markedly red-shifted OH stretching bands (-1), originating from the bridging water molecules, is favored already for n = 2. For n = 3, Li+ reaches its maximum coordination number of four only in [LiI2(H2O)3]-, in accordance with the hard and soft Lewis acid and base principle. Water–water hydrogen bond formation leads to a different solvent-shared ion pair motif in [LiI2(H2O)3]- and network formation even restabilizes the contact ion pair motif in [LiCl2(H2O)3]-. Structural assignments are exclusively possible after the consideration of anharmonic effects. Molecular dynamics simulations confirm that the significance of large amplitude motion (of the water molecules) increases with increasing anion polarizability and that needs to be considered already at cryogenic temperatures

Beyond the plane-parallel and Newtonian approach: Wide-angle redshift distortions and convergence in general relativity

We extend previous analyses of wide-angle correlations in the galaxy power spectrum in redshift space to include all general relativistic effects. These general relativistic corrections to the standard approach become important on large scales and at high redshifts, and they lead to new terms in the wide-angle correlations. We show that in principle the new terms can produce corrections of nearly 10 % on Gpc scales over the usual Newtonian approximation. General relativistic corrections will be important for future large-volume surveys such as SKA and Euclid, although the problem of cosmic variance will present a challenge in observing this.Comment: 14 pages, 5 figures; Typo in equation 5 corrected; results unaffecte

Paleomagnetic Results from Luzon and the Central Philippines

Samples were collected from 86 paleomagnetic sites from the islands of Luzon, Marinduque, Mindoro, Panay, Negros, Cebu, and Mindanao in the Philippine Arc. The sampling sites range in age from Pleistocene to Jurassic. Characteristic directions of magnetization of the samples were determined by the use of vector plots. Curie temperature determinations, thin section studies, and hysteresis studies showed that remanence of these samples is carried by fine-grained (pseudo-single domain) magnetite. Positive fold tests from Miocene data from Panay, Jurassic data from Mindoro, and Cretaceous data from Cebu suggest that the magnetization of these regions was acquired prior to folding. Rotations reported below are measured with respect to the axial goecentric dipole field. The Plio-Pleistocene data set shows no resolvable rotation for the 22 sites. This data set suggests that the various terranes that make up the Philippine Arc have behaved as a single unit during the past 5 m.y. or that deformation has been below the limits of resolution. The inclination data from the Plio-Pleistocene sites have anomalously shallow inclination and are consistent with other Plio-Pleistocene data from Vietnam, Taiwan, and the Marianas. These data support earlier suggestions for a late Neogene offset dipole effect. The late Miocene sites fall into two separate groups. Ten sites from western Luzon show evidence for around 20° of clockwise rotation. In contrast to this, late Miocene samples from the Bicol region, Negros, Marinduque, and Mindanao are not rotated. The cause of the postlate Miocene clockwise rotation of Luzon is unknown, but a Pliocene collision of the North Luzon Arc with Taiwan is suggested. Early Neogene results also separate into two different populations. The population from Marinduque shows evidence for a large counterclockwise rotation. The second early Neogene population comes from Panay, Cebu, and Mindanao and clearly shows evidence for a clockwise rotation. The validity of this rotation is further supported by a fold test and a reversal test. These early Neogene data sets are consistent with a middle to late Miocene collision of the Palawan Continental Terrane and the Central Philippine Arc. Data from six dikes of possible Oligocene age from the Zambales Ophiolite are highly discordant from the present field, being rotated approximately 60° clockwise. The directions from these dikes are similar to a direction reported earlier from late Oligocene sediments also from the Zambales region. These two data sets support the interpretation that the Eocene direction from Zambales is recording a large clockwise rotation of the region. Data from the Mesozoic sites are from two regions. Data from the Cretaceous Pandan formation of Cebu are discordant with data from the Upper Jurassic from Mindoro. The presence of a fold test from each region and a reversal test from Mindoro supports the interpretation that each of these data sets is reliable. The VGP of Mindoro is displaced southward from the Late Jurassic VGP of South China, suggesting a post-Jurassic southward migration of Mindoro

Equatorial Pacific productivity changes near the Eocene-Oligocene boundary

There is general agreement that productivity in high latitudes increased in the late Eocene and remained high in the early Oligocene. Evidence for both increased and decreased productivity across the Eocene-Oligocene transition (EOT) in the tropics has been presented, usually based on only one paleoproductivity proxy and often in sites with incomplete recovery of the EOT itself. A complete record of the Eocene-Oligocene transition was obtained at three drill sites in the eastern equatorial Pacific Ocean (ODP Site 1218 and IODP Sites U1333 and U1334). Four paleoproductivity proxies that have been examined at these sites, together with carbon and oxygen isotope measurements on early Oligocene planktonic foraminifera, give evidence of ecologic and oceanographic change across this climatically important boundary. Export productivity dropped sharply in the basal Oligocene (~33.7�Ma) and only recovered several hundred thousand years later; however, overall paleoproductivity in the early Oligocene never reached the average levels found in the late Eocene and in more modern times. Changes in the isotopic gradients between deep- and shallow-living planktonic foraminifera suggest a gradual shoaling of the thermocline through the early Oligocene that, on average, affected accumulation rates of barite, benthic foraminifera, and opal, as well as diatom abundance near 33.5�Ma. An interval with abundant large diatoms beginning at 33.3�Ma suggests an intermediate thermocline depth, which was followed by further shoaling, a dominance of smaller diatoms, and an increase in average primary productivity as estimated from accumulation rates of benthic foraminifera

Automated compliance checking in healthcare building design

Regulatory frameworks associated to building design are usually complex, representing extensive sets of requirements. For healthcare projects in the UK, this includes statutory and guidance documents. Existing research indicates that they contain subjective requirements, which challenge the practical adoption of automated compliance checking, leading to limited outcomes. This paper aims to propose recommendations for the adoption of automated compliance checking in the design of healthcare buildings. Design Science Research was used to gain a detailed understanding of how information from existing regulatory requirements affects automation, through an empirical study in the design of a primary healthcare facility. In this study, a previously proposed taxonomy was implemented and refined, resulting in the identification of different types of subjective requirements. Based on empirical data emerging from the research, a set of recommendations was proposed focusing on the revision of regulatory documents, as well as to aid designers implementing automated compliance in practice