264 research outputs found

    A 10,000 Mississippi Kite flock observed in Fuerte Esperanza, Argentina

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    The Mississippi Kite (Ictinia mississippiensis) is a Neotropical migrant that nests singly or in loose, small colonies in North America from North Carolina and north Florida west to Kansas, southeastern Colorado, and Texas and north along Mississippi River to south Illinois and Indiana, and west locally to Arizona (Brown & Amadon 1968, Thiollay 1994, Wheeler 2003). The species migrates along the Mesoamerican Land Corridor into South America where it feeds on flying insects in rather small flocks. Wintering range is very imprecisely known but major part of population is likely to winter in central South America east of the Andes, southeastern Bolivia, Paraguay to northern Argentina, and at least to some extent, southwestern Brazil, wandering occasionally to Minas Gerais (Davis 1989, Fergusson-Lees & Christie 2001, Wheeler 2003, Kirwan et al. 2004).Fil: Areta, Juan Ignacio. Provincia de Entre Ríos. Centro de Investigaciones Científicas y Transferencia de Tecnología a la Producción. Universidad Autónoma de Entre Ríos. Centro de Investigaciones Científicas y Transferencia de Tecnología a la Producción. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Santa Fe. Centro de Investigaciones Científicas y Transferencia de Tecnología a la Producción; Argentina. Grupo FALCO; ArgentinaFil: Seipke, Sergio H.. Universidad Nacional de La Plata. Facultad de Ciencias Naturales y Museo; Argentin

    Shadows of Hiroshima: The Evolution of Atomic Bomb Memories Explored Through Japanese Manga

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    This thesis examines how memories of the atomic bombing of Hiroshima on August 6, 1945, are depicted and explored through the works of two Japanese manga (graphic novel) artists, Nakazawa Keiji and Kōno Fumiyo. Nakazawa’s Barefoot Gen series is one of the most well-known artistic depictions of the atomic bombing and two of Kōno’s works, Town of Evening Calm, Country of Cherry Blossoms and In This Corner of the World, address the bombing and its multigenerational impacts. Nakazawa’s status as a first-generation survivor of the bombing is compared with Kōno’s experience as a later-generation resident of Hiroshima to analyze how memories of the attack have evolved over time and across generations, and how they are represented in popular media. Given the accessibility of works such as these, as well as their lasting reputation and legacy, examining how they convey and even transfer memories of this uniquely traumatic moment in the 20th century will develop a better understanding of how the atomic bombing is collectively remembered

    A 10,000 Mississippi Kite flock observed in Fuerte Esperanza, Argentina

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    The Mississippi Kite (Ictinia mississippiensis) is a Neotropical migrant that nests singly or in loose, small colonies in North America from North Carolina and north Florida west to Kansas, southeastern Colorado, and Texas and north along Mississippi River to south Illinois and Indiana, and west locally to Arizona (Brown & Amadon 1968, Thiollay 1994, Wheeler 2003). The species migrates along the Mesoamerican Land Corridor into South America where it feeds on flying insects in rather small flocks. Wintering range is very imprecisely known but major part of population is likely to winter in central South America east of the Andes, southeastern Bolivia, Paraguay to northern Argentina, and at least to some extent, southwestern Brazil, wandering occasionally to Minas Gerais (Davis 1989, Fergusson-Lees & Christie 2001, Wheeler 2003, Kirwan et al. 2004).Facultad de Ciencias Naturales y MuseoConsejo Nacional de Investigaciones Científicas y Técnica

    The Desotamide Family of Antibiotics

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    Microbial natural products underpin the majority of antimicrobial compounds in clinical use and the discovery of new effective antibacterial treatments is urgently required to combat growing antimicrobial resistance. Non-ribosomal peptides are a major class of natural products to which many notable antibiotics belong. Recently, a new family of non-ribosomal peptide antibiotics were discovered—the desotamide family. The desotamide family consists of desotamide, wollamide, surugamide, ulleungmycin and noursamycin/curacomycin, which are cyclic peptides ranging in size between six and ten amino acids in length. Their biosynthesis has attracted significant attention because their highly functionalised scaffolds are cyclised by a recently identified standalone cyclase. Here, we provide a concise review of the desotamide family of antibiotics with an emphasis on their biosynthesis

    A phylogenetic and evolutionary analysis of antimycin biosynthesis

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    Streptomyces species and other Actinobacteria are ubiquitous in diverse environments worldwide and are the source of, or inspiration for, the majority of antibiotics. The genomic era has enhanced biosynthetic understanding of these valuable chemical entities and has also provided a window into the diversity and distribution of natural product biosynthetic gene clusters. Antimycin is an inhibitor of mitochondrial cytochrome c reductase and more recently was shown to inhibit Bcl-2/Bcl-XL-related anti-apoptotic proteins commonly overproduced by cancerous cells. Here we identify 73 putative antimycin biosynthetic gene clusters (BGCs) in publicly available genome sequences of Actinobacteria and classify them based on the presence or absence of cluster-situated genes antP and antQ, which encode a kynureninase and a phosphopantetheinyl transferase (PPTase), respectively. The majority of BGCs possess either both antP and antQ (L-form) or neither (S-form), while a minority of them lack either antP or antQ (IQ- or IP-form, respectively). We also evaluate the biogeographical distribution and phylogenetic relationships of antimycin producers and BGCs. We show that antimycin BGCs occur on five of the seven continents and are frequently isolated from plants and other higher organisms. We also provide evidence for two distinct phylogenetic clades of antimycin producers and gene clusters, which delineate S-form from L- and I-form BGCs. Finally, our findings suggest that the ancestral antimycin producer harboured an L-form gene cluster which was primarily propagated by vertical transmission and subsequently diversified into S-, IQ- and IP-form biosynthetic pathways

    Formicamycins, antibacterial polyketides produced by Streptomyces formicae isolated from African Tetraponera plant-ants

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    We report a new Streptomyces species named S. formicae that was isolated from the African fungus -growing plant-ant Tetraponera penzigi and show that it produces novel pentacyclic polyketides that are active against MRSA and VRE. The chemical scaffold of these compounds, which we have called the formicamycins, is similar to the fasamycins identified from the heterologous expression of clones isolated from environmental DNA, but has significant differences that allow the scaffold to be decorated with up to four halogen atoms. We report the structures and bioacti vities of 16 new molecules and show, using CRISPR/Cas9 genome editing, that biosynthesis of these compounds is encoded by a single type 2 polyketide synthase biosynthetic gene cluster in the S. formicae genome. Our work has identified the first antibiotic from the Tetraponera system and highlights the benefits of exploring unusual ecological niches for new actinomycete strains and novel natural products

    Coordinate regulation of antimycin and candicidin biosynthesis

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    Streptomyces species produce an incredible array of high-value specialty chemicals and medicinal therapeutics. A single species typically harbors ~30 biosynthetic pathways, but only a mere handful of them are expressed in the laboratory, thus poor understanding of how natural products biosynthesis is regulated is a major bottleneck in drug discovery. Antimycins are a large family of anticancer compounds widely produced by Streptomyces species and their regulation is atypical compared to that of most other natural products. Here we demonstrate that antimycin production by Streptomyces albus S4 is regulated by FscRI, a PAS-LuxR-family cluster-situated regulator of the polyene antifungal agent, candicidin. We report that heterologous production of antimycins by Streptomyces coelicolor is dependent on FscRI and show that FscRI activates transcription of key biosynthetic genes. We also demonstrate through ChIP sequencing that FscRI regulation is direct and we provide evidence to suggest that this regulation strategy is conserved and unique to short form antimycin gene clusters. Our study provides direct in vivo evidence for cross-regulation of disparate biosynthetic gene clusters specifying unrelated natural products and expands the paradigmatic understanding of the regulation of secondary metabolism

    A single Streptomyces symbiont makes multiple antifungals to support the fungus farming ant Acromyrmex octospinosus

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    Attine ants are dependent on a cultivated fungus for food and use antibiotics produced by symbiotic Actinobacteria as weedkillers in their fungus gardens. Actinobacterial species belonging to the genera Pseudonocardia, Streptomyces and Amycolatopsis have been isolated from attine ant nests and shown to confer protection against a range of microfungal weeds. In previous work on the higher attine Acromyrmex octospinosus we isolated a Streptomyces strain that produces candicidin, consistent with another report that attine ants use Streptomyces-produced candicidin in their fungiculture. Here we report the genome analysis of this Streptomyces strain and identify multiple antibiotic biosynthetic pathways. We demonstrate, using gene disruptions and mass spectrometry, that this single strain has the capacity to make candicidin and multiple antimycin compounds. Although antimycins have been known for > 60 years we report the sequence of the biosynthetic gene cluster for the first time. Crucially, disrupting the candicidin and antimycin gene clusters in the same strain had no effect on bioactivity against a co-evolved nest pathogen called Escovopsis that has been identified in similar to 30% of attine ant nests. Since the Streptomyces strain has strong bioactivity against Escovopsis we conclude that it must make additional antifungal(s) to inhibit Escovopsis. However, candicidin and antimycins likely offer protection against other microfungal weeds that infect the attine fungal gardens. Thus, we propose that the selection of this biosynthetically prolific strain from the natural environment provides A. octospinosus with broad spectrum activity against Escovopsis and other microfungal weeds.Publisher PDFPeer reviewe

    The regulation and biosynthesis of antimycins

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    Antimycins (>40 members) were discovered nearly 65 years ago but the discovery of the gene cluster encoding antimycin biosynthesis in 2011 has facilitated rapid progress in understanding the unusual biosynthetic pathway. Antimycin A is widely used as a piscicide in the catfish farming industry and also has potent killing activity against insects, nematodes and fungi. The mode of action of antimycins is to inhibit cytochrome c reductase in the electron transport chain and halt respiration. However, more recently, antimycin A has attracted attention as a potent and selective inhibitor of the mitochondrial anti-apoptotic proteins Bcl-2 and Bcl-xL. Remarkably, this inhibition is independent of the main mode of action of antimycins such that an artificial derivative named 2-methoxyantimycin A inhibits Bcl-xL but does not inhibit respiration. The Bcl-2/Bcl-xL family of proteins are overproduced in cancer cells that are resistant to apoptosis-inducing chemotherapy agents, so antimycins have great potential as anticancer drugs used in combination with existing chemotherapeutics. Here we review what is known about antimycins, the regulation of the ant gene cluster and the unusual biosynthetic pathway

    Regulation of Antimycin Biosynthesis Is Controlled by the ClpXP Protease

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    The survival of any microbe relies on its ability to respond to environmental change. Use of extracytoplasmic function (ECF) RNA polymerase sigma (σ) factors is a major strategy enabling dynamic responses to extracellular signals. Streptomyces species harbor a large number of ECF σ factors, nearly all of which are uncharacterized, but those that have been characterized generally regulate genes required for morphological differentiation and/or response to environmental stress, except for σAntA, which regulates starter-unit biosynthesis in the production of antimycin, an anticancer compound. Unlike a canonical ECF σ factor, whose activity is regulated by a cognate anti-σ factor, σAntA is an orphan, raising intriguing questions about how its activity may be controlled. Here, we reconstituted in vitro ClpXP proteolysis of σAntA but not of a variant lacking a C-terminal di-alanine motif. Furthermore, we show that the abundance of σAntA in vivo was enhanced by removal of the ClpXP recognition sequence and that levels of the protein rose when cellular ClpXP protease activity was abolished. These data establish direct proteolysis as an alternative and, thus far, unique control strategy for an ECF RNA polymerase σ factor and expands the paradigmatic understanding of microbial signal transduction regulation
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