Effective Action Approach to Heavy Particle Contributions and Wilsonian Renormalization

We work in theories with both light and heavy particles. A method to obtain an effective low energy action with respect to the light particle is presented. Thanks to Wilsonian renormalization, we obtain effective actions with finite number of local operators describing possible non-decoupling effects of heavy particles. The validity of the method is first checked by explicit computation of a specific observable, the $\rho$ - parameter, in the framework of effective theory. Then we discuss a procedure to obtain the full effective action with respect to light particles in a typical example of the system of (t, b) doublet, gauge bosons and Higgs doublet, regarding only t quark as a heavy particle.Comment: 13 pages, LaTeX209 file, using axodraw.st

Sinorhizobium Meliloti, A Bacterium Lacking The Autoinducer-2 (AI-2) Synthase, Responds To AI-2 Supplied By Other Bacteria

Many bacterial species respond to the quorum-sensing signal autoinducer-2 (AI-2) by regulating different niche-specific genes. Here, we show that Sinorhizobium meliloti, a plant symbiont lacking the gene for the AI-2 synthase, while not capable of producing AI-2 can nonetheless respond to AI-2 produced by other species. We demonstrate that S. meliloti has a periplasmic binding protein that binds AI-2. The crystal structure of this protein (here named SmlsrB) with its ligand reveals that it binds (2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran (R-THMF), the identical AI-2 isomer recognized by LsrB of Salmonella typhimurium. The gene encoding SmlsrB is in an operon with orthologues of the lsr genes required for AI-2 internalization in enteric bacteria. Accordingly, S. meliloti internalizes exogenous AI-2, and mutants in this operon are defective in AI-2 internalization. S. meliloti does not gain a metabolic benefit from internalizing AI-2, suggesting that AI-2 functions as a signal in S. meliloti. Furthermore, S. meliloti can completely eliminate the AI-2 secreted by Erwinia carotovora, a plant pathogen shown to use AI-2 to regulate virulence. Our findings suggest that S. meliloti is capable of \u27eavesdropping\u27 on the AI-2 signalling of other species and interfering with AI-2-regulated behaviours such as virulence

A bioassay for the detection of benzimidazoles reveals their presence in a range of environmental samples.

Cobamides are a family of enzyme cofactors that include vitamin B12 (cobalamin) and are produced solely by prokaryotes. Structural variability in the lower axial ligand has been observed in cobamides produced by diverse organisms. Of the three classes of lower ligands, the benzimidazoles are uniquely found in cobamides, whereas the purine and phenolic bases have additional biological functions. Many organisms acquire cobamides by salvaging and remodeling cobamides or their precursors from the environment. These processes require free benzimidazoles for incorporation as lower ligands, though the presence of benzimidazoles in the environment has not been previously investigated. Here, we report a new purification method and bioassay to measure the total free benzimidazole content of samples from microbial communities and laboratory media components. The bioassay relies on the "calcofluor-bright" phenotype of a bluB mutant of the model cobalamin-producing bacterium Sinorhizobium meliloti. The concentrations of individual benzimidazoles in these samples were measured by liquid chromatography-tandem mass spectrometry. Several benzimidazoles were detected in subpicomolar to subnanomolar concentrations in host-associated and environmental samples. In addition, benzimidazoles were found to be common contaminants of laboratory media components. These results suggest that benzimidazoles present in the environment and in laboratory media have the potential to influence microbial metabolic activities

A niche-mimicking polymer hydrogel-based approach to identify molecular targets for tackling human pancreatic cancer stem cells.

BACKGROUND: Pancreatic adenocarcinoma (PAAD) is one of the most fatal human cancers, but effective therapies remain to be established. Cancer stem cells (CSCs) are highly resistant to anti-cancer drugs and a deeper understanding of their microenvironmental niche has been considered important to provide understanding and solutions to cancer eradication. However, as the CSC niche is composed of a wide variety of biological and physicochemical factors, the development of multidisciplinary tools that recapitulate their complex features is indispensable. Synthetic polymers have been studied as attractive biomaterials due to their tunable biofunctionalities, while hydrogelation technique further renders upon them a diversity of physical properties, making them an attractive tool for analysis of the CSC niche. METHODS: To develop innovative materials that recapitulate the CSC niche in pancreatic cancers, we performed polymer microarray analysis to identify niche-mimicking scaffolds that preferentially supported the growth of CSCs. The niche-mimicking activity of the identified polymers was further optimized by polyethylene glycol (PEG)-based hydrogelation. To reveal the biological mechanisms behind the activity of the optimized hydrogels towards CSCs, proteins binding onto the hydrogel were analyzed by liquid chromatography with tandem mass spectrometry (LC-MS/MS), and the potential therapeutic targets were validated by looking at gene expression and patients' outcome in the TCGA database. RESULTS: PA531, a heteropolymer composed of 2-methoxyethyl methacrylate (MEMA) and 2-(diethylamino)ethyl methacrylate (DEAEMA) (5.5:4.5) that specifically supports the growth and maintenance of CSCs was identified by polymer microarray screening using the human PAAD cell line KLM1. The polymer PA531 was converted into five hydrogels (PA531-HG1 to HG5) and developed to give an optimized scaffold with the highest CSC niche-mimicking activities. From this polymer that recapitulated CSC binding and control, the proteins fetuin-B and angiotensinogen were identified as candidate target molecules with clinical significance due to the correlation between gene expression levels and prognosis in PAAD patients and the proteins associated with the niche-mimicking polymer. CONCLUSION: This study screened for biofunctional polymers suitable for recapitulation of the pancreatic CSC niche and one hydrogel with high niche-mimicking abilities was successfully fabricated. Two soluble factors with clinical significance were identified as potential candidates for biomarkers and therapeutic targets in pancreatic cancers. Such a biomaterial-based approach could be a new platform in drug discovery and therapy development against CSCs, via targeting of their niche

Raman Scattering Study of Ba-doped C60 with t1g States

Raman spectra are reported for Ba doped fullerides, BaxC60(x=3,4,and 6). The lowest frequency Hg modes split into five components for Ba4C60 and Ba6C60 even at room temperature, allowing us a quantitative analysis based on the electron-phonon couping theory. For the superconducting Ba4C60, the density of states at the Fermi energy was derived as 7 eV-1, while the total value of electron-phonon coupling \lambda was found to be 1.0, which is comparable to that of K3C60. The tangential Ag(2) mode, which is known as a sensitive probe for the degree of charge transfer on C60 molecule, shows a remarkable shift depending on the Ba concentration, being roughly consistent with the full charge transfer from Ba to C60. An effect of hybridization between Ba and C60 \pi orbitals is also discussed.Comment: 15 pages, 6 figures submitted to Phys. Rev. B (December 1,1998

Evolution of central pattern generators for the control of a five-link bipedal walking mechanism

Central pattern generators (CPGs), with a basis is neurophysiological studies, are a type of neural network for the generation of rhythmic motion. While CPGs are being increasingly used in robot control, most applications are hand-tuned for a specific task and it is acknowledged in the field that generic methods and design principles for creating individual networks for a given task are lacking. This study presents an approach where the connectivity and oscillatory parameters of a CPG network are determined by an evolutionary algorithm with fitness evaluations in a realistic simulation with accurate physics. We apply this technique to a five-link planar walking mechanism to demonstrate its feasibility and performance. In addition, to see whether results from simulation can be acceptably transferred to real robot hardware, the best evolved CPG network is also tested on a real mechanism. Our results also confirm that the biologically inspired CPG model is well suited for legged locomotion, since a diverse manifestation of networks have been observed to succeed in fitness simulations during evolution.Comment: 11 pages, 9 figures; substantial revision of content, organization, and quantitative result

Role of the Small GTPase Rho3 in Golgi/Endosome Trafficking through Functional Interaction with Adaptin in Fission Yeast

BACKGROUND: We had previously identified the mutant allele of apm1(+) that encodes a homolog of the mammalian µ1A subunit of the clathrin-associated adaptor protein-1 (AP-1) complex, and we demonstrated the role of Apm1 in Golgi/endosome trafficking, secretion, and vacuole fusion in fission yeast. METHODOLOGY/PRINCIPAL FINDINGS: In the present study, we isolated rho3(+), which encodes a Rho-family small GTPase, an important regulator of exocystosis, as a multicopy-suppressor of the temperature-sensitive growth of the apm1-1 mutant cells. Overexpression of Rho3 suppressed the Cl(-) sensitivity and immunosuppressant sensitivity of the apm1-1 mutant cells. Overexpression of Rho3 also suppressed the fragmentation of vacuoles, and the accumulation of v-SNARE Syb1 in Golgi/endosomes and partially suppressed the defective secretion associated with apm1-deletion cells. Notably, electron microscopic observation of the rho3-deletion cells revealed the accumulation of abnormal Golgi-like structures, vacuole fragmentation, and accumulation of secretory vesicles; these phenotypes were very similar to those of the apm1-deletion cells. Furthermore, the rho3-deletion cells and apm1-deletion cells showed very similar phenotypic characteristics, including the sensitivity to the immunosuppressant FK506, the cell wall-damaging agent micafungin, Cl(-), and valproic acid. Green fluorescent protein (GFP)-Rho3 was localized at Golgi/endosomes as well as the plasma membrane and division site. Finally, Rho3 was shown to form a complex with Apm1 as well as with other subunits of the clathrin-associated AP-1 complex in a GTP- and effector domain-dependent manner. CONCLUSIONS/SIGNIFICANCE: Taken together, our findings reveal a novel role of Rho3 in the regulation of Golgi/endosome trafficking and suggest that clathrin-associated adaptor protein-1 and Rho3 co-ordinate in intracellular transport in fission yeast. To the best of our knowledge, this study provides the first evidence of a direct link between the small GTPase Rho and the clathrin-associated adaptor protein-1 in membrane trafficking

Training proposal for community health agents in hearing health

TEMA: capacitação de agentes comunitários de saúde na área de saúde auditiva. OBJETIVO: verificar a efetividade de um programa de capacitação de agentes comunitários de saúde do Programa de Saúde da Família, na área de saúde auditiva infantil. MÉTODO: a casuística constou de dois grupos: grupo A foi constituído por 31 agentes comunitários de saúde da cidade de Bauru e, grupo B, formado por 75 agentes comunitários de saúde de Sorocaba, ambos municípios do Estado de São Paulo. A capacitação foi realizada por meio de aulas expositivas para os dois grupos, contudo para o grupo A foi utilizado uma apostila adaptada da World Health Organization (2006), para que os agentes comunitários de saúde pudessem acompanhar as atividades realizadas de forma interativa. A capacitação abordou os temas: audição e deficiência auditiva, tipos, prevenção e causas da deficiência auditiva, técnicas de identificação e diagnóstico da deficiência auditiva e aspectos gerais da deficiência auditiva. Para validar a capacitação foi aplicado um questionário pré e pós-capacitação com perguntas sobre os assuntos que foram abordados no decorrer do curso, a fim de analisar a assimilação do conteúdo ministrado. RESULTADOS: a capacitação foi efetiva, com aumento no escore total obtido nos questionários pré e pós-capacitação. CONCLUSÕES: os resultados comprovam a eficácia do programa de capacitação com utilização de material e abordagem interativa proposto para os agentes comunitários de saúde dos Programas de Saúde da Família.BACKGROUND: training of community health agents in hearing health. AIM: to verify the effectiveness of a training program regarding the hearing health of children for Community Health Agents of a Family Health Program. METHOD: research sample consisted of two groups: Group A, constituted by 31 community health agents, from Bauru, SP, and Group B, constituted by 75 community health agents, from Sorocaba, SP. Training was provided through classes for both groups. For Group A, a text adapted from the material organized by the World Health Organization (2006) was used so that the community health agents could follow the activities in an interactive way. Training focused on the following topics: normal and impaired hearing; types, prevention and causes of hearing loss; procedures to identify and diagnose the hearing impairment and rehabilitation. Pre and post training questionnaires were used to assess the assimilation of the presented content. RESULTS: training demonstrated to be effective, since there was an increase in the overall score when comparing the scores obtained in the pre and post training questionnaires CONCLUSION: the results indicate the effectiveness of the training program for community health agents of a Family Health Program with the use of texts and with an interactive approach.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq

Molecular Gas in NUclei of GAlaxies (NUGA) I.The counter-rotating LINER NGC4826

We present new high-resolution observations of the nucleus of the counter-rotating LINER NGC4826, made in the J=1-0 and J=2-1 lines of 12CO with the IRAM Plateau de Bure mm-interferometer(PdBI).The CO maps, which achieve 0.8''(16pc) resolution in the 2-1 line, fully resolve an inner molecular gas disk which is truncated at an outer radius of 700pc. The total molecular gas mass is distributed in a lopsided nuclear disk of 40pc radius and two one-arm spirals, which develop at different radii in the disk. The distribution and kinematics of molecular gas in the inner 1kpc of NGC4826 show the prevalence of different types of m=1 perturbations in the gas. Although dominated by rotation, the gas kinematics are perturbed by streaming motions related to the m=1 instabilities. The non-circular motions associated with the inner m=1 perturbations agree qualitatively with the pattern expected for a trailing wave developed outside corotation ('fast' wave). In contrast, the streaming motions in the outer m=1 spiral are better explained by a 'slow' wave. A paradoxical consequence is that the inner m=1 perturbations would not favour AGN feeding. An independent confirmation that the AGN is not being generously fueled at present is found in the low values of the gravitational torques exerted by the stellar potential for R<530pc. The distribution of star formation in the disk of NGC4826 is also strongly asymmetrical. Massive star formation is still vigorous, fed by the significant molecular gas reservoir at R<700pc. There is supporting evidence for a recent large mass inflow episode in NGC4826. These observations have been made in the context of the NUclei of GAlaxies (NUGA) project, aimed at the study of the different mechanisms for gas fueling of AGN.Comment: A&A, 2003, Paper accepted (04/06/03). For a full-resolution version of this paper see http://www.oan.es/preprint

Spiral structure in nearby galaxies I. Sample, data analysis, and overview of results

This paper, the first of two, introduces an observational study of spiral structure in galaxies chosen from the SINGS survey. Near infrared (NIR) and optical data are used to produce mass surface density maps, and from these the morphology of the disc is examined. The aim of this work is to characterise the prevalence of spiral structure in this sample and, in the cases where a clear spiral pattern is found, include the findings in a comparative study (reported in paper II). A two-armed (`grand design') spiral pattern is found in approximately half the galaxies studied, including all those that are designated as grand design in the optical, but also including some, but not all, optically flocculent galaxies. It is found that the level of non-axisymmetric structure in the galaxies' mass distributions is only modestly higher in those galaxies that are classified as `grand design' compared with those that are not, implying that non-grand design galaxies possess significant power in higher order modes. There is no evidence that bars preferentially trigger the spirals, but they do appear to stir up non-axisymmetric structure in the disc. In contrast, there is evidence that strong/close tidal interactions with companion galaxies are associated with strong two-armed spiral structure in the infrared, though there are a number of galaxies with relatively weak infrared spiral structure that do not possess such companions.Comment: 28 pages, 56 figures. Accepted for publication in MNRA