Do Lianas Shape Ant Communities in An Early Successional Tropical Forest?

Almost half of lowland tropical forests are at various stages of regeneration following deforestation or fragmentation. Changes in tree communities along successional gradients have predictable bottom‐up effects on consumers. Liana (woody vine) assemblages also change with succession, but their effects on animal succession remain unexplored. Here we used a large‐scale liana removal experiment across a forest successional chronosequence (7–31 years) to determine the importance of lianas to ant community structure. We conducted 1,088 surveys of ants foraging on and living in trees using tree trunk baiting and hand‐collecting techniques at 34 paired forest plots, half of which had all lianas removed. Ant species composition, β‐diversity, and species richness were not affected by liana removal; however, ant species co‐occurrence (the coexistence of two or more species in a single tree) was more frequent in control plots, where lianas were present, versus removal plots. Forest stand age had a larger effect on ant community structure than the presence of lianas. Mean ant species richness in a forest plot increased by ca. 10% with increasing forest age across the 31‐year chronosequence. Ant surveys from forest \u3e20 years old included more canopy specialists and fewer ground‐nesting ant species versus those from forestsConsequently, lianas had a minimal effect on arboreal ant communities in this early successional forest, where rapidly changing tree community structure was more important to ant species richness and composition

Edaphic Factors and Initial Conditions Influence Successional Trajectories of Early Regenerating Tropical Dry Forests

Edaphic factors and initial conditions can regulate the speed of forest succession. Edaphic factors, which include soil chemistry and topography, determine soil resource availability and can filter species as forests mature. Initial plant cover early in succession can determine the rates at which secondary forests change in structure, richness, biomass and composition over time. While some of the effects of edaphic factors and initial conditions on forest succession have been studied, how they simultaneously modify young regenerating tropical forest has rarely been examined. We surveyed 22 young forests plots in Panama for 7 years (11, 6 and 3‐year‐old stands when censuses began). We study how tree and liana species composition change early in succession, as well as how edaphic factors (soil nutrients and topography) and initial conditions (initial basal area and forest canopy cover) influence changes in tree and liana abundance, species richness, biomass and composition throughout succession. We found that edaphic factors and initial conditions explained up to 45% of the variation in the successional trajectories for trees and lianas. Soil nutrients had a significant positive effect on the changes in tree biomass accretion, while topography significantly contributed to community similarity of large lianas over time. Initial basal area had a significant negative effect on the changes in sapling abundance and tree richness over time and a positive marginal effect on tree biomass accretion. Forest canopy cover only had a positive marginal effect on changes in sapling abundance. Tree abundance, biomass and richness increased over time, while sapling abundance, biomass and richness remained stable or decreased, probably due to community thinning. However, changes over time of small and large lianas diverged, probably due to differential resource availability that affected lianas but not trees. Synthesis. Soil fertility, topography and initial basal area influence early forest regeneration. Higher soil fertility can allow trees to fix carbon faster, and lianas might show habitat association to ridges and slopes. Basal area can determine how fast saplings and trees change in abundance, richness and biomass over time by possibly affecting space availability for recruitment and light availability for growth

La imagen y la narrativa como herramientas para el abordaje psicosocial en escenarios de violencia en el departamento del cesar

El siguiente trabajo académico corresponde a la fase cuatro del diplomado de profundización Acompañamiento Psicosocial en Escenarios de Violencia, ofrecido por la Universidad Nacional Abierta y a Distancia (UNAD) como opción de grado a sus estudiantes de psicología, en este se pretende el reconocimiento de herramientas como métodos de abordaje, específicamente la imagen y la narrativa el cual permite el acercamiento a los contextos que se pretenden reconocer y estudiar. El documento permitirá conocer cada una de las historias identificadas durante la realización del diplomado, mismas que han estado entrelazadas por hechos dolorosos y situaciones que impactaron negativamente en la vida de quienes padecieron el conflicto armado en el departamento del Cesar, pero además enmarca la forma de resiliencia y empoderamiento que estos han adquirido con el único fin de resignificar su vida , la de sus familias, olvidar el pasado y construir a través de la verdad momentos de perdón y reconciliación; Considerando que la esencia del diplomado anteriormente mencionado se basa en la apropiación de constructos y referentes, tanto conceptuales como metodológicos, como lo es por ejemplo el enfoque narrativo, se debe reconocer a este como fuente esencial para la creación de recursos y estrategias que le permitirán a las comunidades desarrollar habilidades de afrontamiento y como fin para la superación de los hechos traumáticos ocasionados por la violencia originada por el conflicto armado en el territorio Colombiano.The following academic work corresponds to phase four of the in-depth diploma course Psychosocial Support in Scenarios of Violence, offered by the National Open and Distance University (UNAD) as a degree option to its psychology students, this aims to recognize tools such as methods of approach, specifically the image and the narrative which allows the approach to the contexts that are intended to be recognized and studied. The document will allow us to know each of the stories identified during the completion of the diploma, which have been intertwined by painful events and situations that negatively impacted the lives of those who suffered the armed conflict in the department of Cesar, but also frames the way of resilience and empowerment that they have acquired with the sole purpose of redefining their lives, that of their families, forgetting the past and building moments of forgiveness and reconciliation through the truth; Considering that the essence of the aforementioned diploma is based on the appropriation of constructs and references, both conceptual and methodological, such as, for example, the narrative approach, this must be recognized as an essential source for the creation of resources and strategies that will allow communities to develop coping skills and as an end to overcoming the traumatic events caused by the violence caused by the armed conflict in Colombian territory

Ensemble Composition and Activity Levels of Insectivorous Bats in Response to Management Intensification in Coffee Agroforestry Systems

Shade coffee plantations have received attention for their role in biodiversity conservation. Bats are among the most diverse mammalian taxa in these systems; however, previous studies of bats in coffee plantations have focused on the largely herbivorous leaf-nosed bats (Phyllostomidae). In contrast, we have virtually no information on how ensembles of aerial insectivorous bats – nearly half the Neotropical bat species – change in response to habitat modification. To evaluate the effects of agroecosystem management on insectivorous bats, we studied their diversity and activity in southern Chiapas, Mexico, a landscape dominated by coffee agroforestry. We used acoustic monitoring and live captures to characterize the insectivorous bat ensemble in forest fragments and coffee plantations differing in the structural and taxonomic complexity of shade trees. We captured bats of 12 non-phyllostomid species; acoustic monitoring revealed the presence of at least 12 more species of aerial insectivores. Richness of forest bats was the same across all land-use types; in contrast, species richness of open-space bats increased in low shade, intensively managed coffee plantations. Conversely, only forest bats demonstrated significant differences in ensemble structure (as measured by similarity indices) across land-use types. Both overall activity and feeding activity of forest bats declined significantly with increasing management intensity, while the overall activity, but not feeding activity, of open-space bats increased. We conclude that diverse shade coffee plantations in our study area serve as valuable foraging and commuting habitat for aerial insectivorous bats, and several species also commute through or forage in low shade coffee monocultures

Local canopy disturbance as an explanation for long‐term increases in liana abundance

Environmental Biolog

Ensemble Composition and Activity Levels of Insectivorous Bats in Response to Management Intensification in Coffee Agroforestry Systems

Shade coffee plantations have received attention for their role in biodiversity conservation. Bats are among the most diverse mammalian taxa in these systems; however, previous studies of bats in coffee plantations have focused on the largely herbivorous leaf-nosed bats (Phyllostomidae). In contrast, we have virtually no information on how ensembles of aerial insectivorous bats – nearly half the Neotropical bat species – change in response to habitat modification. To evaluate the effects of agroecosystem management on insectivorous bats, we studied their diversity and activity in southern Chiapas, Mexico, a landscape dominated by coffee agroforestry. We used acoustic monitoring and live captures to characterize the insectivorous bat ensemble in forest fragments and coffee plantations differing in the structural and taxonomic complexity of shade trees. We captured bats of 12 non-phyllostomid species; acoustic monitoring revealed the presence of at least 12 more species of aerial insectivores. Richness of forest bats was the same across all land-use types; in contrast, species richness of open-space bats increased in low shade, intensively managed coffee plantations. Conversely, only forest bats demonstrated significant differences in ensemble structure (as measured by similarity indices) across land-use types. Both overall activity and feeding activity of forest bats declined significantly with increasing management intensity, while the overall activity, but not feeding activity, of open-space bats increased. We conclude that diverse shade coffee plantations in our study area serve as valuable foraging and commuting habitat for aerial insectivorous bats, and several species also commute through or forage in low shade coffee monocultures

Disentangling signatures of selection before and after European colonization in latin Americans

Throughout human evolutionary history, large-scale migrations have led to intermixing (i.e., admixture) between previously separated human groups. Although classical and recent work have shown that studying admixture can yield novel historical insights, the extent to which this process contributed to adaptation remains underexplored. Here, we introduce a novel statistical model, specific to admixed populations, that identifies loci under selection while determining whether the selection likely occurred post-admixture or prior to admixture in one of the ancestral source populations. Through extensive simulations, we show that this method is able to detect selection, even in recently formed admixed populations, and to accurately differentiate between selection occurring in the ancestral or admixed population. We apply this method to genome-wide SNP data of ∼4,000 individuals in five admixed Latin American cohorts from Brazil, Chile, Colombia, Mexico, and Peru. Our approach replicates previous reports of selection in the human leukocyte antigen region that are consistent with selection post-admixture. We also report novel signals of selection in genomic regions spanning 47 genes, reinforcing many of these signals with an alternative, commonly used local-ancestry-inference approach. These signals include several genes involved in immunity, which may reflect responses to endemic pathogens of the Americas and to the challenge of infectious disease brought by European contact. In addition, some of the strongest signals inferred to be under selection in the Native American ancestral groups of modern Latin Americans overlap with genes implicated in energy metabolism phenotypes, plausibly reflecting adaptations to novel dietary sources available in the Americas

Consequences of a large-scale fragmentation experiment for Neotropical bats : disentangling the relative importance of local and landscape-scale effects

Context Habitat loss, fragmentation and degradation are widespread drivers of biodiversity decline. Understanding how habitat quality interacts with landscape context, and how they jointly affect species in human-modified landscapes, is of great importance for informing conservation and management. Objectives We used a whole-ecosystem manipulation experiment in the Brazilian Amazon to investigate the relative roles of local and landscape attributes in affecting bat assemblages at an interior-edge-matrix disturbance gradient. Methods We surveyed bats in 39 sites, comprising continuous forest (CF), fragments, forest edges and intervening secondary regrowth. For each site, we assessed vegetation structure (local-scale variable) and, for five focal scales, quantified habitat amount and four landscape configuration metrics. Results Smaller fragments, edges and regrowth sites had fewer species and higher levels of dominance than CF. Regardless of the landscape scale analysed, species richness and evenness were mostly related to the amount of forest cover. Vegetation structure and configurational metrics were important predictors of abundance, whereby the magnitude and direction of response to configurational metrics were scale-dependent. Responses were ensemble-specific with local-scale vegetation structure being more important for frugivorous than for gleaning animalivorous bats. Conclusions Our study indicates that scale-sensitive measures of landscape structure are needed for a more comprehensive understanding of the effects of fragmentation on tropical biota. Although forest fragments and regrowth habitats can be of conservation significance for tropical bats our results further emphasize that primary forest is of irreplaceable value, underlining that their conservation can only be achieved by the preservation of large expanses of pristine habitat

Amplified Genes May Be Overexpressed, Unchanged, or Downregulated in Cervical Cancer Cell Lines

Several copy number-altered regions (CNAs) have been identified in the genome of cervical cancer, notably, amplifications of 3q and 5p. However, the contribution of copy-number alterations to cervical carcinogenesis is unresolved because genome-wide there exists a lack of correlation between copy-number alterations and gene expression. In this study, we investigated whether CNAs in the cell lines CaLo, CaSki, HeLa, and SiHa were associated with changes in gene expression. On average, 19.2% of the cell-line genomes had CNAs. However, only 2.4% comprised minimal recurrent regions (MRRs) common to all the cell lines. Whereas 3q had limited common gains (13%), 5p was entirely duplicated recurrently. Genome-wide, only 15.6% of genes located in CNAs changed gene expression; in contrast, the rate in MRRs was up to 3 times this. Chr 5p was confirmed entirely amplified by FISH; however, maximum 33.5% of the explored genes in 5p were deregulated. In 3q, this rate was 13.4%. Even in 3q26, which had 5 MRRs and 38.7% recurrently gained SNPs, the rate was only 15.1%. Interestingly, up to 19% of deregulated genes in 5p and 73% in 3q26 were downregulated, suggesting additional factors were involved in gene repression. The deregulated genes in 3q and 5p occurred in clusters, suggesting local chromatin factors may also influence gene expression. In regions amplified discontinuously, downregulated genes increased steadily as the number of amplified SNPs increased (p<0.01, Spearman's correlation). Therefore, partial gene amplification may function in silencing gene expression. Additional genes in 1q, 3q and 5p could be involved in cervical carcinogenesis, specifically in apoptosis. These include PARP1 in 1q, TNFSF10 and ECT2 in 3q and CLPTM1L, AHRR, PDCD6, and DAP in 5p. Overall, gene expression and copy-number profiles reveal factors other than gene dosage, like epigenetic or chromatin domains, may influence gene expression within the entirely amplified genome segments