Orphan penumbrae: Submerging horizontal fields

We investigate the properties of orphan penumbrae, which are photospheric filamentary structures observed in active regions near polarity inversion lines that resemble the penumbra of regular sunspots but are not connected to any umbra. We use Hinode data from the Solar Optical Telescope to determine the properties of orphan penumbrae. Spectropolarimetric data are employed to obtain the vector magnetic field and line-of-sight velocities in the photosphere. Magnetograms are used to study the overall evolution of these structures, and G-band and Ca II H filtergrams are to investigate their brightness and apparent horizontal motions. Orphan penumbrae form between regions of opposite polarity in places with horizontal magnetic fields. Their magnetic configuration is that of $\Omega$-shaped flux ropes. In the two cases studied here, the opposite-polarity regions approach each other with time and the whole structure submerges as the penumbral filaments disappear. Orphan penumbrae are very similar to regular penumbrae, including the existence of strong gas flows. Therefore, they could have a similar origin. The main difference between them is the absence of a "background" magnetic field in orphan penumbrae. This could explain most of the observed differences. The fast flows we detect in orphan penumbrae may be caused by the siphon flow mechanism. Based on the similarities between orphan and regular penumbrae, we propose that the Evershed flow is also a manifestation of siphon flows.Comment: 15 pages, 15 figure

Quantum Interference and Decoherence in Single-Molecule Junctions: How Vibrations Induce Electrical Current

Quantum interference effects and decoherence mechanisms in single-molecule junctions are analyzed employing a nonequilibrium Green's function approach. Electrons tunneling through quasi-degenerate states of a nanoscale molecular junction exhibit interference effects. We show that electronic-vibrational coupling, inherent to any molecular junction, strongly quenches such interference effects. As a result, the electrical current can be significantly larger than without electronic-vibrational coupling. The analysis reveals that the quenching of quantum interference is particularly pronounced if the junction is vibrationally highly excited, e.g. due to current-induced nonequilibrium effects in the resonant transport regime.Comment: 11 pages, 4 figure

Observation of a parity oscillation in the conductance of atomic wires

Using a scanning tunnel microscope or mechanically controlled break junctions, atomic contacts of Au, Pt and Ir are pulled to form chains of atoms. We have recorded traces of conductance during the pulling process and averaged these for a large amount of contacts. An oscillatory evolution of conductance is observed during the formation of the monoatomic chain suggesting a dependence on even or odd numbers of atoms forming the chain. This behaviour is not only present in the monovalent metal Au, as it has been previously predicted, but is also found in the other metals which form chains suggesting it to be a universal feature of atomic wires

Stability of three-dimensional relativistic jets: implications for jet collimation

The stable propagation of jets in FRII sources is remarkable if one takes into account that large-scale jets are subjected to potentially highly disruptive three-dimensional (3D) Kelvin-Helmholtz instabilities. Numerical simulations can address this problem and help clarify the causes of this remarkable stability. Following previous studies of the stability of relativistic flows in two dimensions (2D), it is our aim to test and extend the conclusions of such works to three dimensions. We present numerical simulations for the study of the stability properties of 3D, sheared, relativistic flows. This work uses a fully parallelized code Ratpenat that solves equations of relativistic hydrodynamics in 3D. The results of the present simulations confirm those in 2D. We conclude that the growth of resonant modes in sheared relativistic flows could be important in explaining the long-term collimation of extragalactic jets.Comment: Accepted for publication in A&

A TDDFT study of the excited states of DNA bases and their assemblies

We present a detailed study of the optical absorption spectra of DNA bases and base pairs, carried out by means of time dependent density functional theory. The spectra for the isolated bases are compared to available theoretical and experimental data and used to assess the accuracy of the method and the quality of the exchange-correlation functional: Our approach turns out to be a reliable tool to describe the response of the nucleobases. Furthermore, we analyze in detail the impact of hydrogen bonding and $\pi$-stacking in the calculated spectra for both Watson-Crick base pairs and Watson-Crick stacked assemblies. We show that the reduction of the UV absorption intensity (hypochromicity) for light polarized along the base-pair plane depends strongly on the type of interaction. For light polarized perpendicular to the basal plane, the hypochromicity effect is reduced, but another characteristic is found, namely a blue shift of the optical spectrum of the base-assembly compared to that of the isolated bases. The use of optical tools as fingerprints for the characterization of the structure (and type of interaction) is extensively discussed.Comment: 31 pages, 8 figure

Transient charge and energy flow in the wide-band limit

The wide-band limit is a commonly used approximation to analyze transport through nanoscale devices. In this work we investigate its applicability to the study of charge and heat transport through molecular break junctions exposed to voltage biases and temperature gradients. We find that while this approximation faithfully describes the long-time charge and heat transport, it fails to characterize the short-time behavior of the junction. In particular, we find that the charge current flowing through the device shows a discontinuity when a temperature gradient is applied, while the energy flow is discontinuous when a voltage bias is switched on and even diverges when the junction is exposed to both a temperature gradient and a voltage bias. We provide an explanation for this pathological behavior and propose two possible solutions to this problem.Comment: 11 pages, 9 figure