Nota corta. Detección mediante PCR multiplex y caracterización de cepas no toxigénicas de Pseudomonas syringae pv. phaseolicola de distintas zonas de España

The efficient control of halo blight, caused by Pseudomonas syringae pv. phaseolicola, is primarily based on the use of pathogen-free seed. Detection of the pathogen in seeds is currently carried out with high-sensitive methods based on the detection by PCR of genes involved in the biosynthesis of phaseolotoxin, which was believed to be produced by all strains of the pathogen with epidemiological importance. However, field epidemics of halo blight in the county of Castilla y León, Spain, are often associated to nontoxigenic isolates of P. syringae pv. phaseolicola, which cannot be detected using current molecular and serological methods. The results presented in this work show the existence of nontoxigenic isolates of P. syringae pv. phaseolicola in areas other than Castilla y León, indicating the need to establish a reliable methodology for seed certification. A simple two-step methodology is presented with the aim to identify both types of isolates that is based on a multiplex enrichment PCR of seed soakates and on pathogenicity assays.El control eficiente de la grasa de la judía causada por Pseudomonas syringae pv. phaseolicola se basa principalmente en la utilización de semilla libre del patógeno. La detección del patógeno en semilla se efectúa mediante métodos altamente sensibles basados en la detección por PCR de los genes responsables de la biosíntesis de la faseolotoxina, la cual, hasta ahora, se consideraba que era sintetizada por todas las cepas del patógeno con importancia epidemiológica. Sin embargo, en la Comunidad de Castilla y León, España, las epidemias de grasa de la judía en campo se asocian frecuentemente con cepas no toxigénicas de P. syringae pv. phaseolicola, que no pueden ser detectadas con los métodos moleculares y serológicos actuales. Los resultados presentados en este trabajo demuestran la existencia de aislados no toxigénicos de P. syringae pv. phaseolicola en zonas distintas de Castilla y León, lo que implica la necesidad de establecer una metodología fiable para la certificación de semillas de judía. Con este propósito, se presenta un sencillo protocolo en dos fases que permite la identificación de los dos tipos de aislados, y que se basa en una PCR multiplex con enriquecimiento a partir de extractos de semilla y en ensayos de patogenicidad

The Use of "EOF" in the Mean Sea Level Oscillations Study An Application to Cadiz

Oscillation modes in mean sea level in the port of Cadiz are computed and analyzed from simultaneous water level and atmospheric pressure records. Empirical Orthogonal Function Decomposition (EOF), cross spectral and least square harmonic analysis are used. EOF is applied in an unusual way in order to extract common oscillation modes of atmospheric pressure and Mean Sea Level (MSL) series. In spite of the short length of time series, less than four months, EOF is a very powerful tool and makes possible the isolation of astronomical and meteorological oscillation modes

A Simple Method for Tidal Current Prediction in Short Length Convergent Channels An Application to the Vigo and Pontevedra Estuaries

In this paper a simple method for tidal current modelling in short length convergent and elongated channels is presented. The authors have found that for this kind of channels a very suitable approach to tidal current velocity estimation can be obtained through a very simple formula. This method has been developed to obtain reliable tidal current velocity estimations along the channel using as less information as possible. In fact, the only necessary information to apply this method are the harmonic constants of the tidal elevation at any location in the channel and a proper nautical chart. A graphical method is also presented to inquire when the geometrical characteristics of a given channel allow the application of our method. The validation has been performed on two estuaries of the Gallega Estuarine System in Spain

Scanner image methodology (SIM) to measure dimensions of leaves for agronomical applications

A scanner image methodology was used to determine plant dimensions, such as leaf area, length and width. The values obtained using SIM were compared with those recorded by the LI-COR leaf area meter. Bias, linearity, reproducibility and repeatability (R&R) were evaluated for SIM. Different groups of leaves were scanned and measured. R&R studies showed that, the lowest SIM’s resolution was nineteen categories. SIM’s R&R ANOVA showed the method’s measurement error was not significant. In the image processing method, the color image was converted to gray scale over the green band and it was segmented using Otsu methodology. The noise produced was cleaned with a median filter. The leaf image was rotated to align the longest parallel line to y-axis or x-axis using central moments. From the centroid using directional erosions the leaf width and length were obtained and recorded.Key words: Leaf area, width, length, digital image analysis, segmentation

Systematic Tools for the Conceptual Design of Inherently Safer Chemical Processes

Society is continuously facing challenges for safer chemical plants design, which is usually driven by economic criteria during the early steps of the design process, relegating safety concerns to the latest stages. This paper highlights the synergy of merging Process System Engineering tools with inherent safety principles. First, we design a superstructure that comprises several alternatives for streams, equipment, and process conditions, which exhibit different performance of economic and inherently safer indicators, the total annualized cost, and the Dow’s Fire and Explosion Index, respectively. The solution to this multiobjective problem is given by a Pareto set of solutions that indicates the existing trade-off between both objectives. The capabilities of the proposed framework are illustrated through two case studies, which solutions provide valuable insights into the design problem and are intended to guide decision-makers toward the adoption of inherently safer process alternatives.The authors acknowledge financial support from “Proyectos de l+D para grupos de investigación emergentes GV/2016/005” (Conselleria d’Educació, Investigació, Cultura i Esport, GENERALITAT VALENCIANA) and from the Spanish “Ministerio de Economía, Industria y Competitividad” (CTQ2016-77968-C3-02-P, AEI/FEDER, UE)

A functional BH3 domain in an aquaporin from Leishmania infantum.

Despite the absence of sequences showing significant similarity to any of the members of the Bcl-2 family of proteins in protozoa, experiments carried out in yeast or trypanosomatids have demonstrated that ectopic expression of some of these members alters their response to different death stimuli. Because the BH3 domain is the smallest common signature in all the proteins of this family of apoptosis regulators and also because they are essential for molecular interactions between antagonistic members, we looked for sequences with significant similarity to the BH3 motif in the Leishmania infantum genome. Among the top scoring ones, we found the MYLALQNLGDEV amino-acid stretch at the C terminus of a previously described aquaporin, now renamed as Li-BH3AQP. This motif is highly conserved in homologous proteins from other species of the Leishmania genus. The association of Li-BH3AQP with human Bcl-XL was demonstrated by both co-immunoprecipitation and yeast two-hybrid experiments. Ectopic expression of Li-BH3AQP reduced viability of HeLa cells and this deleterious effect was abrogated by the simultaneous overexpression of Bcl-XL. Although we were not able to demonstrate a reduction in parasite viability when the protein was overexpressed in Leishmania promastigotes, a prodeath effect could be observed when the parasites overexpressing Li-BH3AQP were treated with staurosporine or antimycin A. Surprisingly, these parasites were more resistant, compared with wild-type parasites, to hypotonic stress or nutrient deprivation. The prodeath activity was abolished upon replacement of two highly conserved amino acids in this BH3 domain. Taken together, these results point to Li-BH3AQP as the first non-enzymatic protein ever described in trypanosomatids that is involved in cell death

Thinning of the Monte Perdido Glacier in the Spanish Pyrenees since 1981

This paper analyzes the evolution of the Monte Perdido Glacier, the third largest glacier in the Pyrenees, from 1981 to the present. We assessed the evolution of the glacier''s surface area by analysis of aerial photographs from 1981, 1999, and 2006, and changes in ice volume by geodetic methods with digital elevation models (DEMs) generated from topographic maps (1981 and 1999), airborne lidar (2010) and terrestrial laser scanning (TLS, 2011, 2012, 2013, and 2014) data. We interpreted the changes in the glacier based on climate data from nearby meteorological stations. The results indicate that the degradation of this glacier accelerated after 1999. The rate of ice surface loss was almost three times greater during 1999-2006 than during earlier periods. Moreover, the rate of glacier thinning was 1.85 times faster during 1999-2010 (rate of surface elevation change = -8.98 ± 1.80 m, glacier-wide mass balance = -0.73 ± 0.14 m w.e. yr-1) than during 1981-1999 (rate of surface elevation change = -8.35 ± 2.12 m, glacier-wide mass balance = -0.42 ± 0.10 m w.e. yr-1). From 2011 to 2014, ice thinning continued at a slower rate (rate of surface elevation change = -1.93 ± 0.4 m yr-1, glacier-wide mass balance = -0.58 ± 0.36 m w.e. yr-1). This deceleration in ice thinning compared to the previous 17 years can be attributed, at least in part, to two consecutive anomalously wet winters and cool summers (2012-2013 and 2013-2014), counteracted to some degree by the intense thinning that occurred during the dry and warm 2011-2012 period. However, local climatic changes observed during the study period do not seem sufficient to explain the acceleration of ice thinning of this glacier, because precipitation and air temperature did not exhibit statistically significant trends during the study period. Rather, the accelerated degradation of this glacier in recent years can be explained by a strong disequilibrium between the glacier and the current climate, and likely by other factors affecting the energy balance (e.g., increased albedo in spring) and feedback mechanisms (e.g., heat emitted from recently exposed bedrock and debris covered areas)

Short-term impact of noise, other air pollutants and meteorological factors on emergency hospital mental health admissions in the Madrid region

A number of environmental factors, such as air pollution, noise in urbanised settings and meteorological-type variables, may give rise to important effects on human health. In recent years, many studies have confirmed the relation between various mental disorders and these factors, with a possible impact on the increase in emergency hospital admissions due to these causes. The aim of this study was to analyse the impact of a range of environmental factors on daily emergency hospital admissions due to mental disorders in the Madrid Autonomous Region (MAR), across the period 2013–2018

Efecto del incremento de la actividad física sobre la condición física en un grupo de adolescentes con sobrepeso y/u obesidad

This study evaluated the effect of increased physical activity (PA) to achieve PA recommendations according to the World Health Organization for improving health in a group of 42 adolescents (28 girls) with overweight / obesity (BMI = 29.37 ± 4.5 Kg / m²). The 12 weeks treatment consisted in the prescription and follow-up of the PA guidelines divided in two phases: intensive (weekly follow-up) and extensive (fortnightly follow-up). PA level was assessed using the Physician-based Assessment and Counseling questionnaire and the Physical Fitness using upper body isometric strength test, lower body explosive strength test and cardiorespiratory fitness test, all from the ALPHA battery fitness tests. After treatment, a significant improvement was observed (p <0.05) in cardiorespiratory fitness. In conclusion, this study shows that increasing PA practice and meeting the weekly recommendations of 300 minutes of moderate-vigorous PA, the adolescents’ group improved their cardiorespiratory fitness.Se analiza el efecto del incremento de actividad física (AF) para conseguir el cumplimiento de recomendaciones de AF para la mejora de la salud  según la Organización Mundial de la Salud  en un grupo de 42 adolescentes (28 chicas) con sobrepeso/obesidad (IMC=29.37±4.5 Kg/m²). El tratamiento de 12 semanas de duración consistió en la prescripción y seguimiento de AF en dos fases: intensiva (seguimiento semanal) y extensiva (seguimiento quincenal). El nivel de AF se valoró mediante el cuestionario Physician-based Assessment and Counseling  y  la condición física  mediante pruebas de fuerza isométrica del tren superior, fuerza explosiva de piernas y capacidad cardiorrespiratoria de la batería ALPHA. Tras el tratamiento se observa una mejora significativa (p<0,05) en capacidad cardiorrespiratoria. En conclusión, se muestra que incrementando la práctica de AF y cumpliendo las recomendaciones semanales de 300 minutos de AF moderada-vigorosa los adolescentes mejoraron su capacidad cardiorrespiratoria