Defect Doping of InN

InN films grown by molecular beam epitaxy have been subjected to 2 MeV He{sup +} irradiation followed by thermal annealing. Theoretical analysis of the electron mobilities shows that thermal annealing removes triply charged donor defects, creating films with electron mobilities approaching those predicted for uncompensated, singly charged donors. Optimum thermal annealing of irradiated InN can be used to produce samples with electron mobilities higher than those of as grown films

Finishing the euchromatic sequence of the human genome

The sequence of the human genome encodes the genetic instructions for human physiology, as well as rich information about human evolution. In 2001, the International Human Genome Sequencing Consortium reported a draft sequence of the euchromatic portion of the human genome. Since then, the international collaboration has worked to convert this draft into a genome sequence with high accuracy and nearly complete coverage. Here, we report the result of this finishing process. The current genome sequence (Build 35) contains 2.85 billion nucleotides interrupted by only 341 gaps. It covers ∼99% of the euchromatic genome and is accurate to an error rate of ∼1 event per 100,000 bases. Many of the remaining euchromatic gaps are associated with segmental duplications and will require focused work with new methods. The near-complete sequence, the first for a vertebrate, greatly improves the precision of biological analyses of the human genome including studies of gene number, birth and death. Notably, the human enome seems to encode only 20,000-25,000 protein-coding genes. The genome sequence reported here should serve as a firm foundation for biomedical research in the decades ahead

The structural heterogeneity of an urbanised mangrove forest area in southeastern Brazil: Influence of environmental factors and anthropogenic stressors

Abstract The objective of this study is to evaluate the characteristics of the forest in an urbanised mangrove using vegetation structure and abiotic conditions to distinguish habitat heterogeneity/quality. A total of 16 points in Vitória Bay were selected in the fringe and basin forests. The variables evaluated were height and diameter of the individual trees, basal area, density, dominance, interstitial water, litter mass, grain size, organic matter and anthropogenic influences. The results indicated that the mangrove area, due to suffering intensely from various anthropogenic effects, forests with varying degrees of maturity. Areas more distant from direct human effects had a higher degree of development and environmental quality relative to points closer to urban pressures. Intermediate development levels were also observed, which indicated pulses of environmental change. Human interventions caused alterations in the development of the forest which increased the mortality rate and reduced the diameter and height of the trees. The environmental variables of salinity, organic matter, litter mass, grain size and anthropogenic stressors contributed to the structural patterns. Our data suggest that an analysis of the vegetation structure and the abiotic factors are useful indicators to evaluate habitat quality, thus providing a basis for future management

Rapid amyloid fiber formation from the fast-folding WW domain FBP28

The WW domains are small proteins that contain a three-stranded, antiparallel β-sheet. The 40-residue murine FBP28 WW domain rapidly formed twirling ribbon-like fibrils at physiological temperature and pH, with morphology typical of amyloid fibrils. These ribbons were unusually wide and well ordered, making them highly suitable for structural studies. Their x-ray and electron-diffraction patterns displayed the characteristic amyloid fiber 0.47-nm reflection of the cross-β diffraction signature. Both conventional and electron cryomicroscopy showed clearly that the ribbons were composed of many 2.5-nm-wide subfilaments that ran parallel to the long axis of the fiber. There was a region of lower density along the center of each filament. Lateral association of these filaments generated twisted, often interlinked, sheets up to 40 nm wide and many microns in length. The pitch of the helix varied from 60 to 320 nm, depending on the width of the ribbon. The wild-type FBP28 fibers were formed under conditions in which multiexponential folding kinetics is observed in other studies and which was attributed to a change in the mechanism of folding. It is more likely that those phases result from initial events in the off-pathway aggregation observed here