Phenological growth stages of pepino (Solanum muricatum) according to the BBCH scale

[EN] The pepino (Soianum muricatum) is a solanaceous vegetatively propagated fruit crop of Andean origin. We provide a detailed description of phenological stages because it is of interest for pepino crop management and research. Given the increasing prominence of this crop, and the fact that it morphologically and developmentally variable, and different from other major solanaceous crops, we have developed a pepino specific BBCH (Biologische Bundesanstalt, Bundessortenamt, CHemische Industrie) numerical scale. Nine principal stages are described for germination/rooting, leaf development, formation of side shoots, main shoot elongation, inflorescence emergence, flowering, development of fruit, ripening of fruit and seed, and senescence. Secondary stages (two-digit scale) have been identified for all principal stages. Complementary descriptions using mesostages (three-digit scale) have been developed for leaf development, formation of side shoots, inflorescence emergence, and flowering phenological stages. A description of all phenological stages combined with illustrations is provided. The utility of the BBCH scale has been validated by comparing several traits of agronomic interest at specific developmental stages in a collection of pepino local varieties, modern cultivars and wild relatives. The BBCH scale developed provides uniform criteria for the description, identification and selection of phenological stages of the pepino and will facilitate the management, breeding and conservation of genetic resources of this crop. (C) 2014 Elsevier B.V. All rights reserved.Herraiz García, FJ.; Vilanova Navarro, S.; Plazas Ávila, MDLO.; Gramazio, P.; Andújar, I.; Rodríguez Burruezo, A.; Fita, A.... (2015). Phenological growth stages of pepino (Solanum muricatum) according to the BBCH scale. Scientia Horticulturae. 183:1-7. doi:10.1016/j.scienta.2014.12.008S1718

DNA structure directs positioning of the mitochondrial genome packaging protein Abf2p

The mitochondrial genome (mtDNA) is assembled into nucleo-protein structures termed nucleoids and maintained differently compared to nuclear DNA, the involved molecular basis remaining poorly understood. In yeast (Saccharomyces cerevisiae), mtDNA is a similar to 80 kbp linear molecule and Abf2p, a double HMG-box protein, packages and maintains it. The protein binds DNA in a non-sequence-specific manner, but displays a distinct 'phased-binding' at specific DNA sequences containing poly-adenine tracts (A-tracts). We present here two crystal structures of Abf2p in complex with mtDNA-derived fragments bearing A-tracts. Each HMG-box of Abf2p induces a 90. bend in the contacted DNA, causing an overall U-turn. Together with previous data, this suggests that U-turn formation is the universal mechanism underlying mtDNA compaction induced by HMG-box proteins. Combining this structural information with mutational, biophysical and computational analyses, we reveal a unique DNA binding mechanism for Abf2p where a characteristic N-terminal flag and helix are crucial for mtDNA maintenance. Additionally, we provide the molecular basis for A-tract mediated exclusion of Abf2p binding. Due to high prevalence of Atracts in yeast mtDNA, this has critical relevance for nucleoid architecture. Therefore, an unprecedented A-tract mediated protein positioning mechanism regulates DNA packaging proteins in the mitochondria, and in combination with DNA-bending and U-turn formation, governs mtDNA compaction

Gallic Acid Dimer As a Double π−Hole Donor: Evidence from X‑ray, Theoretical Calculations, and Generalization from the Cambridge Structural Database

In this work, we demonstrate that the centrosymmetric eight-membered supramolecular ring R2 2 (8) that is formed upon dimerization of benzoic acids has a marked tendency to establish π−hole interactions with electron-rich atoms. We have used the Cambridge Structural Database to demonstrate the preference of carboxylic acid dimers to form donor−acceptor interactions involving π−holes located at the C atoms above and below the molecular plane. Moreover, we have carried out DFT calculations (PBE0-D3/def2-TZVP) to investigate the geometric and energetic features of these interactions and how they are affected by the substituents of the aromatic ring. Finally, as an example we report the synthesis and X-ray characterization of a solvate of gallic acid with dioxane, where two molecules of dioxane are located above and below the eight-membered supramolecular ring, forming two symmetrically equivalent O···C π−hole interactions

Two New Polymorphic Cocrystals of Zafirlukast: Preparation, Crystal Structure, and Stability Relations

Two new cocrystals of zafirlukast with piperazine, existing in five different solid forms, have been discovered during a cocrystal screening. The crystal structure of one of these forms has been determined by single crystal X-ray diffraction, and the stability landscape of the crystalline forms of the new cocrystal has been studied. In the present article, we extend the knowledge about the solid state of this important pharmaceutical drug for the treatment of asthma by reporting the crystal structures of two new solvates (acetonitrile and butanol) and the elusive anhydrous Form X, which have been solved by single crystal X-ray diffraction

Fostering Conservation via an Integrated Use of Conventional Approaches and High-Throughput SPET Genotyping: A Case Study Using the Endangered Canarian EndemicsSolanum lidiiandS. vespertilio (Solanaceae)

[EN] Islands provide unique opportunities to integrated research approaches to study evolution and conservation because boundaries are circumscribed, geological ages are often precise, and many taxa are greatly imperiled. We combined morphological and hybridization studies with high-throughput genotyping platforms to streamline relationships in the endangered monophyletic and highly diverse lineage ofSolanumin the Canarian archipelago, where three endemic taxa are currently recognized. Inter-taxa hybridizations were performed, and morphological expression was assessed with a common-garden approach. Using the eggplant Single Primer Enrichment Technology (SPET) platform with 5,093 probes, 74 individuals of three endemic taxa (Solanum lidii,S. vespertiliosubsp.vespertilio, andS. vespertiliosubsp.doramae) were sampled for SNPs. While morphological and breeding studies showed clear distinctions and some continuous variation, inter-taxon hybrids were fertile and heterotic for vigor traits. SPET genotyping revealed 1,421 high-quality SNPs and supported four, not three, distinct taxonomic entities associated with post-emergence geological, ecological and geographic factors of the islands. Given the lack of barriers to hybridization among all the taxa and their molecular differences, great care must be taken in population management. Conservation strategies must take account of the sexual and breeding systems and genotypic distribution among populations to successfully conserve and restore threatened/endangered island taxa, as exemplified bySolanumon the Canary Islands.This work was supported by funds from project DEMIURGO to the Jardin Botanico Canario "Viera y Clavijo" -Unidad Asociada al CSIC of the Cabildo de Gran Canaria. Consumables and genotyping were funded by the Jardin Botanico Canario "Viera y Clavijo" -Unidad Asociada al CSIC. Participation of authors from Universitat Politecnica de Valencia has been partially funded by the European Union's Horizon 2020 Research and Innovation Programme under the Grant Agreement No. 677379 (G2P-SOL project: Linking genetic resources, genomes, and phenotypes of solanaceous crops). PG was grateful to Universitat Politecnica de Valencia and to Japan Society for the Promotion of Science for their respective Postdoctoral Grants [PAID-10-18 and FY2019-P19105 JSPS Postdoctoral Fellowship for Research in Japan (Standard)].Gramazio, P.; Jaén-Molina, R.; Vilanova Navarro, S.; Prohens Tomás, J.; Marrero, Á.; Caujapé-Castells, J.; Anderson, GJ. (2020). Fostering Conservation via an Integrated Use of Conventional Approaches and High-Throughput SPET Genotyping: A Case Study Using the Endangered Canarian EndemicsSolanum lidiiandS. vespertilio (Solanaceae). Frontiers in Plant Science. 11:1-17. https://doi.org/10.3389/fpls.2020.00757S11711Ablay, G., & Hürlimann, M. (2000). 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Grafting vigour is associated with DNA de-methylation in eggplant.

In horticulture, grafting is a popular technique used to combine positive traits from two different plants. This is achieved by joining the plant top part (scion) onto a rootstock which contains the stem and roots. Rootstocks can provide resistance to stress and increase plant production, but despite their wide use, the biological mechanisms driving rootstock-induced alterations of the scion phenotype remain largely unknown. Given that epigenetics plays a relevant role during distance signalling in plants, we studied the genome-wide DNA methylation changes induced in eggplant (Solanum melongena) scion using two interspecific rootstocks to increase vigour. We found that vigour was associated with a change in scion gene expression and a genome-wide hypomethylation in the CHH context. Interestingly, this hypomethylation correlated with the downregulation of younger and potentially more active long terminal repeat retrotransposable elements (LTR-TEs), suggesting that graft-induced epigenetic modifications are associated with both physiological and molecular phenotypes in grafted plants. Our results indicate that the enhanced vigour induced by heterografting in eggplant is associated with epigenetic modifications, as also observed in some heterotic hybrids