FTIR spectroscopy can predict organic matter quality in regenerating cutover peatlands.

International audienceVegetational changes during the restoration of cutover peatlands leave a legacy in terms of the organic matter quality of the newly formed peat. Current efforts to restore peatlands at a large scale therefore require low cost, and high throughout, techniques to monitor the evolution of organic matter. In this study, we assessed the Fourier Transform Infrared (FTIR) spectra of the organic matter in peat samples at various stages of peatland regeneration from five European countries. Using predictive partial least squares analyses, we were able to reconstruct both peat C:N ratio and carbohydrate signatures, but not the micromorphological composit ion of vegetation remains, from the FTIR datasets. Despite utilising different size fractions, both carbohydrate (< 200 μm fraction) and FTIR (bulk soil) analyses report on the composition of plant cell wall constituents in the peat and therefore essentially reveal the composition of the parent vegetational material. This suggests that FTIR analysis of peat may be used successfully for evaluation of the present and future organic matter composition of peat in monitoring of restoration efforts

Universal features of the order-parameter fluctuations : reversible and irreversible aggregation

We discuss the universal scaling laws of order parameter fluctuations in any system in which the second-order critical behaviour can be identified. These scaling laws can be derived rigorously for equilibrium systems when combined with the finite-size scaling analysis. The relation between order parameter, criticality and scaling law of fluctuations has been established and the connexion between the scaling function and the critical exponents has been found. We give examples in out-of-equilibrium aggregation models such as the Smoluchowski kinetic equations, or of at-equilibrium Ising and percolation models.Comment: 19 pages, 10 figure

The ‘mosaic habitat’ concept in human evolution: past and present

The habitats preferred by hominins and other species are an important theme in palaeoanthropology, and the ‘mosaic habitat’ (also referred to as habitat heterogeneity) has been a central concept in this regard for the last four decades. Here we explore the development of this concept – loosely defined as a range of different habitat types, such as woodlands, riverine forest and savannah within a limited spatial area– in studies of human evolution in the last sixty years or so. We outline the key developments that took place before and around the time when the term ‘mosaic’ came to wider palaeoanthropological attention. To achieve this we used an analysis of the published literature, a study of illustrations of hominin evolution from 1925 onwards and an email survey of senior researchers in palaeoanthropology and related fields. We found that the term mosaic starts to be applied in palaeoanthropological thinking during the 1970’s due to the work of a number of researchers, including Karl Butzer and Glynn Isaac , with the earliest usage we have found of ‘mosaic’ in specific reference to hominin habitats being by Adriaan Kortlandt (1972). While we observe a steady increase in the numbers of publications reporting mosaic palaeohabitats, in keeping with the growing interest and specialisation in various methods of palaeoenvironmental reconstruction, we also note that there is a lack of critical studies that define this habitat, or examine the temporal and spatial scales associated with it. The general consensus within the field is that the concept now requires more detailed definition and study to evaluate its role in human evolution

Whole-genome sequencing reveals host factors underlying critical COVID-19

Critical COVID-19 is caused by immune-mediated inflammatory lung injury. Host genetic variation influences the development of illness requiring critical care1 or hospitalization2,3,4 after infection with SARS-CoV-2. The GenOMICC (Genetics of Mortality in Critical Care) study enables the comparison of genomes from individuals who are critically ill with those of population controls to find underlying disease mechanisms. Here we use whole-genome sequencing in 7,491 critically ill individuals compared with 48,400 controls to discover and replicate 23 independent variants that significantly predispose to critical COVID-19. We identify 16 new independent associations, including variants within genes that are involved in interferon signalling (IL10RB and PLSCR1), leucocyte differentiation (BCL11A) and blood-type antigen secretor status (FUT2). Using transcriptome-wide association and colocalization to infer the effect of gene expression on disease severity, we find evidence that implicates multiple genes—including reduced expression of a membrane flippase (ATP11A), and increased expression of a mucin (MUC1)—in critical disease. Mendelian randomization provides evidence in support of causal roles for myeloid cell adhesion molecules (SELE, ICAM5 and CD209) and the coagulation factor F8, all of which are potentially druggable targets. Our results are broadly consistent with a multi-component model of COVID-19 pathophysiology, in which at least two distinct mechanisms can predispose to life-threatening disease: failure to control viral replication; or an enhanced tendency towards pulmonary inflammation and intravascular coagulation. We show that comparison between cases of critical illness and population controls is highly efficient for the detection of therapeutically relevant mechanisms of disease

Influence of age and sex on winter site fidelity of sanderlings Calidris alba

Many migratory bird species show high levels of site fidelity to their wintering sites, which confers advantages due to prior knowledge, but may also limit the ability of the individual to move away from degrading sites or to detect alternative foraging opportunities. Winter site fidelity often varies among age groups, but sexual differences have seldom been recorded in birds. We studied a population of individually colour-marked sanderlings wintering in and around the Tejo estuary, a large estuarine wetland on the western coast of Portugal. For 160 individuals, sighted a total of 1,249 times between November 2009 and March 2013, we calculated the probability that they moved among five distinct wintering sites and how this probability is affected by distance between them. To compare site fidelity among age classes and sexes, as well as within the same winter and over multiple winters, we used a Site Fidelity Index (SFI). Birds were sexed using a discriminant function based on biometrics of a large set of molecularly sexed sanderlings (n = 990). The vast majority of birds were observed at one site only, and the probability of the few detected movements between sites was negatively correlated with the distance among each pair of sites. Hardly any movements were recorded over more than 15 km, suggesting small home ranges. SFI values indicated that juveniles were less site-faithful than adults which may reflect the accumulated knowledge and/or dominance of older animals. Among adults, females were significantly less site faithful than males. A sexual difference in winter site fidelity is unusual in shorebirds. SFI values show site-faithfulness is lower when multiple winters were considered, and most birds seem to chose a wintering site early in the season and use that site throughout the winter. Sanderlings show a very limited tendency to explore alternative wintering options, which might have implications for their survival when facing habitat change or loss (e.g., like severe beach erosion as can be the case at one of the study sites)

Preseli dolerite bluestones: axe-heads, Stonehenge monoliths and outcrop sources

Chemical compositions and magnetic susceptibility data were compared for 12 dolerite bluestone implements including axes, axe-hammers and battle-axes, 11 Stonehenge monoliths (chemical data only), and potential source outcrops in Preseli, South Wales. Most of the studied artefacts are of spotted dolerite, a small number being unspotted dolerite. Bivariate graphs, discriminant analysis and t-tests were used singly and in combination to show, respectively, that the implements found at sites in England are mainly similar to Stonehenge monoliths, while the implements found in Wales have a variety of compositions and are much less similar to Stonehenge monoliths. The dichotomy between English and Welsh dolerite bluestone implements could be explained by exploitation of different Preseli outcrops or erratic assemblages derived from them. A small number of spotted dolerite implements have previously been shown to have chemical compositions atypical of and marginal to Preseli, suggesting the possibility of a source of spotted dolerite outside Preseli. Previously published analytical data in combination with the new implement/outcrop comparisons presented in this paper support derivation of the majority of analysed Stonehenge monoliths at one particular outcrop within the group of four identified by Thorpe et al. 15 years ago. Analysis of all the extant bluestone monoliths at Stonehenge (now possible using non-destructive methods) would allow progress in identifying monolith outcrop sources, and in understanding the links with the bluestone axe trade