Development and Evaluation of vetPAL, a Student-led Peer-Assisted Learning Program

Based on an idea from a final-year student, Bristol Veterinary School introduced vetPAL, a student-led, peer-assisted learning program. The program involved fifth-year (final-year) students acting as tutors and leading sessions for fourth-year students (tutees) in clinical skills and revision (review) topics. The initiative aimed to supplement student learning while also providing tutors with opportunities to further develop a range of skills. All tutors received training and the program was evaluated using questionnaires collected from tutees and tutors after each session. Tutees' self-rated confidence increased significantly in clinical skills and for revision topics. Advantages of being taught by students rather than staff included the informal atmosphere, the tutees' willingness to ask questions, and the relatability of the tutors. The small group size and the style of learning in the revision sessions (i.e., group work, discussions, and interactivity) were additional positive aspects identified by both tutees and tutors. Benefits for tutors included developing their communication and teaching skills. The training sessions were considered key in helping tutors feel prepared to lead sessions, although the most difficult aspects were the lack of teaching experience and time management. Following the successful pilot of vetPAL, plans are in place to make the program permanent and sustainable, while incorporating necessary changes based on the evaluation and the student leader's experiences running the program. A vetPAL handbook has been created to facilitate organization of the program for future years. </jats:p

Kajian Potensi Angin Laut Sebagai Sumber Energi Terbarukan Pembangkit Listrik Pulau Kecil di Pesisir Utara Provinsi Papua

Papua province has nine small islands that are inhabited, but there is no access to electricity on these islands. The solution is the use of sea wind as a source of energy for a small power plant. This study aims to determine the potential of sea wind as an alternative source of electrical energy on the north coast of Papua Province. Data Measurement is carried out using an HP-866B anomometer on a hill near the coast to maximize the sea wind. There are two methods used in this research: the minimum-maximum value to determine the wind speed range and linear regression to determine the distribution pattern of the wind. The range of the sea wind is 0.2–6.18 m/s. If the minimum speed is limited to 1.6 m/s, then the range of kinetic energy is 5.59–322.22 Joules/s, mechanical power is 5.59–322.22 Watts, and actual power is 0.57–33.13 Watts. Meanwhile, the pattern shows that the sea wind from the north coast of Papua Province blows with two trends: constant and increasing, specifically in the afternoon and evening. Based on that, the development of a wind power plant on the north coast of Papua Province can be carried out using a multi-turbine system to increase the actual power that can be obtained

GAMBUT field experiment of peatland wildfires in Sumatra: from ignition to spread and suppression

Peat wildfires can burn over large areas of peatland, releasing ancient carbon and toxic gases into the atmosphere over prolonged periods. These emissions cause haze episodes of pollution and accelerate climate change. Peat wildfires are characterised by smouldering - the flameless, most persistent type of combustion. Mitigation strategies are needed in arctic, boreal, and tropical areas but are hindered by incomplete scientific understanding of smouldering. Here, we present GAMBUT, the largest and longest to-date field experiment of peat wildfires, conducted in a degraded peatland of Sumatra. Temperature, emission and spread of peat fire were continuously measured over 4-10 days and nights, and three major rainfalls. Measurements of temperature in the soil provide field experimental evidence of lethal fire severity to the biological system of the peat up to 30 cm depth. We report that the temperature of the deep smouldering is 13% hotter than shallow layer during daytime. During night-time, both deep and shallow smouldering had the same level of temperature. The experiment was terminated by suppression with water. Comparison of rainfall with suppression confirms the existence of a critical water column height below which extinction is not possible. GAMBUT provides a unique understanding of peat wildfires at field conditions that can contribute to mitigation strategies

AlliumMap-A comparative genomics resource for cultivated Allium vegetables

Background: Vegetables of the genus Allium are widely consumed but remain poorly understood genetically. Genetic mapping has been conducted in intraspecific crosses of onion (Allium cepa L.), A. fistulosum and interspecific crosses between A. roylei and these two species, but it has not been possible to access genetic maps and underlying data from these studies easily. Description: An online comparative genomics database, AlliumMap, has been developed based on the GMOD CMap tool at http://alliumgenetics.org. It has been populated with curated data linking genetic maps with underlying markers and sequence data from multiple studies. It includes data from multiple onion mapping populations as well as the most closely related species A. roylei and A. fistulosum. Further onion EST-derived markers were evaluated in the A. cepa x A. roylei interspecific population, enabling merging of the AFLP-based maps. In addition, data concerning markers assigned in multiple studies to the Allium physical map using A. cepa-A. fistulosum alien monosomic addition lines have been compiled. The compiled data reveal extensive synteny between onion and A. fistulosum. Conclusions: The database provides the first online resource providing genetic map and marker data from multiple Allium species and populations. The additional markers placed on the interspecific Allium map confirm the value of A. roylei as a valuable bridge between the genetics of onion and A. fistulosum and as a means to conduct efficient mapping of expressed sequence markers in Allium. The data presented suggest that comparative approaches will be valuable for genetic and genomic studies of onion and A. fistulosum. This online resource will provide a valuable means to integrate genetic and sequence-based explorations of Allium genomes

Lipopolysaccharide from Gut-Associated Lymphoid-Tissue-Resident Alcaligenes faecalis: Complete Structure Determination and Chemical Synthesis of Its Lipid A

Alcaligenes faecalis is the predominant Gram-negative bacterium inhabiting gut-associated lymphoid tissues, Peyer's patches. We previously reported that an A. faecalis lipopolysaccharide (LPS) acted as a weak agonist for Toll-like receptor 4 (TLR4)/myeloid differentiation factor-2 (MD-2) receptor as well as a potent inducer of IgA without excessive inflammation, thus suggesting that A. faecalis LPS might be used as a safe adjuvant. In this study, we characterized the structure of both the lipooligosaccharide (LOS) and LPS from A. faecalis. We synthesized three lipid A molecules with different degrees of acylation by an efficient route involving the simultaneous introduction of 1- and 4′-phosphates. Hexaacylated A. faecalis lipid A showed moderate agonistic activity towards TLR4-mediated signaling and the ability to elicit a discrete interleukin-6 release in human cell lines and mice. It was thus found to be the active principle of the LOS/LPS and a promising vaccine adjuvant candidate

Not a melting pot: Plant species aggregate in their non-native range

Aim: Plant species continue to be moved outside of their native range by human activities. Here, we aim to determine whether, once introduced, plants assimilate into native communities or whether they aggregate, thus forming mosaics of native- and alien-rich communities. Alien species might aggregate in their non-native range owing to shared habitat preferences, such as their tendency to establish in high-biomass, species-poor areas. Location: Twenty-two herbaceous grasslands in 14 countries, mainly in the temperate zone. Time period: 2012–2016. Major taxa studied: Plants. Methods: We used a globally coordinated survey. Within this survey, we found 46 plant species, predominantly from Eurasia, for which we had co-occurrence data in their native and non-native ranges. We tested for differences in co-occurrence patterns of 46 species between their native (home) and non-native (away) range. We also tested whether species had similar habitat preferences, by testing for differences in total biomass and species richness of the patches that species occupy in their native and non-native ranges. Results: We found the same species to show different patterns of association depending on whether they were in their native or non-native range. Alien species were negatively associated with native species; instead, they aggregated with other alien species in species-poor, high-biomass communities in their non-native range compared with their native range. Main conclusions: The strong differences between the native (home) and non-native (away) range in species co-occurrence patterns are evidence that the way in which species associate with resident communities in their non-native range is not species dependent, but is instead a property of being away from their native range. These results thus highlight that species might undergo important ecological changes when introduced away from their native range. Overall, we show origin-dependent associations that result in novel communities, in which alien-rich patches exist within a mosaic of native-dominated communities

Legacy of Amazonian Dark Earth soils on forest structure and species composition

This is the final version. Available from the publisher via the DOI in this record.Aim: Amazonian forests predominantly grow on highly weathered and nutrient poor soils. Anthropogenically enriched Amazonian Dark Earths (ADE), traditionally known as Terra Preta de Índio, were formed by pre-Columbian populations. ADE soils are characterized by increased fertility and have continued to be exploited following European colonization. Here, we evaluated the legacy of land-use and soil enrichment on the composition and structure in ADE and non-ADE (NDE) forests. Location: Eastern and southern Amazonia. Time period: Pre-Columbia – 2014. Methods: We sampled nine pairs of ADE and adjacent NDE forest plots in eastern and southern Amazonia. In each plot, we collected soil samples at 0–10 and 10–20 cm depth and measured stem diameter, height, and identified all individual woody plants (palms, trees and lianas) with diameter ≥ 10 cm. We compared soil physicochemical properties, vegetation diversity, floristic composition, aboveground biomass, and percentage of useful species. Results: In the nine paired plots, soil fertility was significantly higher in ADE soil. We sampled 4,191 individual woody plants representing 404 species and 65 families. The floristic composition of ADE and NDE forests differed significantly at both local and regional levels. In southern Amazonia, ADE forests had, on average, higher aboveground biomass than other forests of the region, while in eastern Amazonia, biomass was similar to that of NDE forests. Species richness of both forest types did not differ and was within the range of existing regional studies. The differences in composition between large and small diameter tree recruits may indicate long-term recovery and residual effects from historical land-use. Additionally, the proportion of edible species tended to be higher in the ADE forests of eastern and southern Amazonia. Main conclusions: The marked differences in soil fertility, floristic composition and aboveground biomass between ADE and NDE forests are consistent with a small-scale long-term land-use legacy and a regional increase in tree diversity

Evaluating the effects of landscape configuration on site occupancy and movement dynamics of odonates in Iowa

Odonates contribute highly to global biodiversity and are considered good indicators of environmental quality, but they are under-studied and quantitative information on their habitat associations is lacking. Our objective was to examine the effects of landscape configuration on site occupancy and movement dynamics of four odonate species in Iowa: Tramea onusta, Epitheca princeps, Pantala flavescens, and Calopteryx maculata. We conducted standardized visual encounter surveys for odonates at 233 public properties in Iowa from 2007 to 2011 and computed landscape variables within a 200, 600 m, and 1 km radius of each surveyed site. Using a robust design occupancy model in Program MARK, we estimated detection probability and site occupancy, site extinction, and site colonization probabilities for each species. We found few significant effects of landscape variables on site occupancy, extinction, or colonization, although landscape variables at 600 m were included in the best model for all species. Detection probability (SE) ranged from 0.30 (0.04) for Pantala flavescens to 0.49 (0.04) for Calopteryx maculata. Our study provides information to aid habitat restoration and management efforts on sites having suitable characteristics in the surrounding landscape and ultimately help conserve odonates

Padrão geográfico de diversidade genética em populações naturais de Pau-rosa (Aniba rosaeodora), na Amazônia Central

Rosewood (Aniba rosaeodora Ducke, Lauraceae) is an Amazonian evergreen tree and a source of the purest linalool, the main component of its essential oil, which is very valuable in the international perfumery market. After decades of over-exploitation it is currently considered as threatened. We evaluated the genetic diversity and its distribution in four populations in Central Amazonia. Thirty-five reliable RAPD markers were generated, of which 32 were polymorphic (91.4%). Variation was higher within the populations (76.5%; p < 0.0001) and geographic distribution contributed to population differentiation (23.4%; p < 0.0001). The Amazon River had a small influence on gene flow (3.3%; p < 0.0001), but we identified evidence of gene flow across the river. There were significant differences in marker frequencies (p < 0.05), in agreement with the low gene flow (Nm = 2.02). The correlation between genetic distance and gene flow was - 0.95 (p = 0.06) and between geographic distance and gene flow was -0.78 (p = 0.12). There was a geographic cline of variability across an East-West axis, influenced as well by the Amazon River, suggesting the river could be a barrier to gene flow. Although threatened, these Rosewood populations retain high diversity, with the highest levels in the Manaus population, which has been protected for over 42 years in a Reserve.O Pau-rosa (Aniba rosaeodora Ducke, Lauraceae) é uma árvore amazônica fonte do mais puro linalol, o qual é o principal componente do seu óleo essencial e muito valioso no mercado internacional de perfumaria. Após várias décadas de intensa exploração, a espécie foi levada à categoria de ameaçada de extinção. Quatro populações naturais distribuídas na bacia Amazônia Central foram avaliadas quanto ao nível e a distribuição da diversidade genética. Trinta e cinco marcadores RAPD reprodutíveis foram gerados, dos quais 32 foram polimórficos (91,4%). A diversidade foi maior dentro das populações (76,5%; p < 0,0001) e a distribuição geográfica contribuiu para a diferenciação entre as populações (23,4%; p < 0,0001). A AMOVA indicou que pode haver uma influência parcial do Rio Amazonas no fluxo gênico (3,3%; p < 0,0001), mas foram identificadas evidências de fluxo gênico atravessando o rio. Houve diferenças significativas nas freqüências dos marcadores (p < 0,05) e o fluxo gênico estimado foi relativamente baixo (Nm = 2,02). A correlação entre a distância genética e o fluxo gênico foi de - 0,95 (p = 0,06) e para a distância geográfica e o fluxo gênico foi de - 0,78 (p = 0,12). Houve um padrão geográfico de variabilidade ao longo do eixo Leste - Oeste, influenciado também pelo Rio Amazonas, o que sugere que o rio poderia funcionar como uma barreira para o fluxo gênico. Apesar de ameaçadas, estas populações de Pau-rosa possuem alta diversidade, com o maior valor na população de Manaus, que vem sendo protegida por 42 anos em uma reserva