747 research outputs found
Minimalist AdaBoost for blemish identification in potatoes
We present a multi-class solution based on minimalist Ad-
aBoost for identifying blemishes present in visual images of potatoes.
Using training examples we use Real AdaBoost to rst reduce the fea-
ture set by selecting ve features for each class, then train binary clas-
siers for each class, classifying each testing example according to the
binary classier with the highest certainty. Against hand-drawn ground
truth data we achieve a pixel match of 83% accuracy in white potatoes
and 82% in red potatoes. For the task of identifying which blemishes
are present in each potato within typical industry dened criteria (10%
coverage) we achieve accuracy rates of 93% and 94%, respectively
ABC-SysBio—approximate Bayesian computation in Python with GPU support
Motivation: The growing field of systems biology has driven demand for flexible tools to model and simulate biological systems. Two established problems in the modeling of biological processes are model selection and the estimation of associated parameters. A number of statistical approaches, both frequentist and Bayesian, have been proposed to answer these questions
The clinical and phenotypical assessment of seronegative villous atrophy; a prospective UK centre experience evaluating 200 adult cases over a 15-year period (2000-2015).
BACKGROUND: Seronegative villous atrophy (SNVA) is commonly attributed to coeliac disease (CD). However, there are other causes of SNVA. More recently angiotensin-2-receptor-blockers (A2RBs) have been reported as an association but data on SNVA have been limited to centres evaluating complex case referrals and not SNVA in general. OBJECTIVES: To provide clinical outcomes and associations in a large prospective study overseeing all newcomers with SNVA. DESIGN: Over a 15-year period (2000-2015) we evaluated 200 adult patients with SNVA at a UK centre. A diagnosis of either seronegative CD (SNCD) or seronegative non-CD (SN-non-CD) was reached. Baseline comparisons were made between the groups, with 343 seropositive CD subjects serving as controls. RESULTS: Of the 200 SNVA cases, SNCD represented 31% (n=62) and SN-non-CD 69% (n=138). The human leucocyte antigen (HLA)-DQ2 and/or DQ8 genotype was present in 61%, with a 51% positive predictive value for SNCD. The breakdown of identifiable causes in the SN-non-CD group comprised infections (27%, n=54), inflammatory/immune-mediated disorders (17.5%, n=35) and drugs (6.5%, n=13; two cases related to A2RBs). However, no cause was found in 18% (n=36) and of these 72% (n=26/36) spontaneously normalised duodenal histology while consuming a gluten-enriched diet. Following multivariable logistic regression analysis an independent factor associated with SN-non-CD was non-white ethnicity (OR 10.8, 95% CI 2.2 to 52.8); in fact, 66% of non-whites had GI infections. On immunohistochemistry all groups stained positive for CD8-T-cytotoxic intraepithelial lymphocytes. However, additional CD4-T helper intraepithelial lymphocytes were occasionally seen in SN-non-CD mimicking the changes associated with refractory CD. CONCLUSIONS: Most patients with SNVA do not have CD, in particular those who are not white. Furthermore, a subgroup with no obvious aetiology will show spontaneous histological resolution while consuming gluten. These findings suggest caution in empirically prescribing a gluten-free diet without investigation
Improved perturbation theory in the vortex liquids state of type II superconductors
We develop an optimized perturbation theory for the Ginzburg - Landau
description of thermal fluctuations effects in the vortex liquids. Unlike the
high temperature expansion which is asymptotic, the optimized expansion is
convergent. Radius of convergence on the lowest Landau level is in
2D and in 3D. It allows a systematic calculation of magnetization
and specific heat contributions due to thermal fluctuations of vortices in
strongly type II superconductors to a very high precision. The results are in
good agreement with existing Monte Carlo simulations and experiments.
Limitations of various nonperturbative and phenomenological approaches are
noted. In particular we show that there is no exact intersection point of the
magnetization curves both in 2D and 3D.Comment: 24 pages, 9 figure
Innovations in air sampling to detect plant pathogens
Many innovations in the development and use of air sampling devices have occurred in plant pathology since the first description of the Hirst spore trap. These include improvements in capture efficiency at relatively high air-volume collection rates, methods to enhance the ease of sample processing with downstream diagnostic methods and even full automation of sampling, diagnosis and wireless reporting of results. Other innovations have been to mount air samplers on mobile platforms such as UAVs and ground vehicles to allow sampling at different altitudes and locations in a short space of time to identify potential sources and population structure. Geographical Information Systems and the application to a network of samplers can allow a greater prediction of airborne inoculum and dispersal dynamics. This field of technology is now developing quickly as novel diagnostic methods allow increasingly rapid and accurate quantifications of airborne species and genetic traits. Sampling and interpretation of results, particularly action-thresholds, is improved by understanding components of air dispersal and dilution processes and can add greater precision in the application of crop protection products as part of integrated pest and disease management decisions. The applications of air samplers are likely to increase, with much greater adoption by growers or industry support workers to aid in crop protection decisions. The same devices are likely to improve information available for detection of allergens causing hay fever and asthma or provide valuable metadata for regional plant disease dynamics
Modelling and Interpreting The Effects of Spatial Resolution on Solar Magnetic Field Maps
Different methods for simulating the effects of spatial resolution on
magnetic field maps are compared, including those commonly used for
inter-instrument comparisons. The investigation first uses synthetic data, and
the results are confirmed with {\it Hinode}/SpectroPolarimeter data. Four
methods are examined, one which manipulates the Stokes spectra to simulate
spatial-resolution degradation, and three "post-facto" methods where the
magnetic field maps are manipulated directly. Throughout, statistical
comparisons of the degraded maps with the originals serve to quantify the
outcomes. Overall, we find that areas with inferred magnetic fill fractions
close to unity may be insensitive to optical spatial resolution; areas of
sub-unity fill fractions are very sensitive. Trends with worsening spatial
resolution can include increased average field strength, lower total flux, and
a field vector oriented closer to the line of sight. Further-derived quantities
such as vertical current density show variations even in areas of high average
magnetic fill-fraction. In short, unresolved maps fail to represent the
distribution of the underlying unresolved fields, and the "post-facto" methods
generally do not reproduce the effects of a smaller telescope aperture. It is
argued that selecting a method in order to reconcile disparate spatial
resolution effects should depend on the goal, as one method may better preserve
the field distribution, while another can reproduce spatial resolution
degradation. The results presented should help direct future inter-instrument
comparisons.Comment: Accepted for publication in Solar Physics. The final publication
(including full-resolution figures) will be available at
http://www.springerlink.co
Quality of mother-child interaction, differences in sexual attitudes, and inter-generational disagreement on sexuality.
The current paper examines the frequency of inter-generational disagreement reported by mothers and adolescents as a function of the quality of their interaction, and the match between their sexual attitudes. We expected that the quality of family interaction would act as a "family asset" that would enable members of families to manage and control the tensions caused by differences in (sexual) attitudes. Data on 319 British adolescent-mother pairs were analysed using structural equation modelling, revealing good support for these expectations: differences in sexual attitudes were more strongly linked to inter-family disagreement in low quality of mother-child interaction families than in high quality of motherchild interaction families. Implications of the study are discussed. © 1997 OPA (Overseas Publishers Association)
Evidence for a narrow dip structure at 1.9 GeV/c in diffractive photoproduction
A narrow dip structure has been observed at 1.9 GeV/c in a study of
diffractive photoproduction of the final state performed by the
Fermilab experiment E687.Comment: The data of Figure 6 can be obtained by downloading the raw data file
e687_6pi.txt. v5 (2nov2018): added Fig. 7, the 6 pion energy distribution as
requested by a reade
Search for Gravitational Waves from Primordial Black Hole Binary Coalescences in the Galactic Halo
We use data from the second science run of the LIGO gravitational-wave
detectors to search for the gravitational waves from primordial black hole
(PBH) binary coalescence with component masses in the range 0.2--.
The analysis requires a signal to be found in the data from both LIGO
observatories, according to a set of coincidence criteria. No inspiral signals
were found. Assuming a spherical halo with core radius 5 kpc extending to 50
kpc containing non-spinning black holes with masses in the range 0.2--, we place an observational upper limit on the rate of PBH coalescence
of 63 per year per Milky Way halo (MWH) with 90% confidence.Comment: 7 pages, 4 figures, to be submitted to Phys. Rev.
Search for the standard model Higgs boson decaying to a pair in events with no charged leptons and large missing transverse energy using the full CDF data set
We report on a search for the standard model Higgs boson produced in
association with a vector boson in the full data set of proton-antiproton
collisions at TeV recorded by the CDF II detector at the
Tevatron, corresponding to an integrated luminosity of 9.45 fb. We
consider events having no identified charged lepton, a transverse energy
imbalance, and two or three jets, of which at least one is consistent with
originating from the decay of a quark. We place 95% credibility level upper
limits on the production cross section times standard model branching fraction
for several mass hypotheses between 90 and . For a Higgs
boson mass of , the observed (expected) limit is 6.7
(3.6) times the standard model prediction.Comment: Accepted by Phys. Rev. Let
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