211 research outputs found

    TLC–densitometry of rosmarinic and caffeic acids in the evaluation of Lamiaceae species growing in Central Europe

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    A TLC-densitometric method was used for the parallel quantification of rosmarinic acid (RA) and caffeic acid (CA) in crude extracts of Salvia species (Family Lamiaceae), obtained by ultrasonic extraction with 60% methanol. The densitometric measurement was performed in fluorescent mode as it has been published earlier. The applicability of the method has been investigated mainly from the viewpoint of the starting material. Questions are discussed like, what kind of factors should be taken into account, if the drugs are to be characterized, and how the RA and CA contents of samples vary in the plants are discussed. The drugs (plant material) show great differences due to the time of harvest of time, to the organ composition of drugs, to the extraction and storage conditions of the stock-solutions prepared from them. The importance of these parameters is illustrated on Salvia species native to Hungary

    Constructing a biodiversity terminological inventory.

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    The increasing growth of literature in biodiversity presents challenges to users who need to discover pertinent information in an efficient and timely manner. In response, text mining techniques offer solutions by facilitating the automated discovery of knowledge from large textual data. An important step in text mining is the recognition of concepts via their linguistic realisation, i.e., terms. However, a given concept may be referred to in text using various synonyms or term variants, making search systems likely to overlook documents mentioning less known variants, which are albeit relevant to a query term. Domain-specific terminological resources, which include term variants, synonyms and related terms, are thus important in supporting semantic search over large textual archives. This article describes the use of text mining methods for the automatic construction of a large-scale biodiversity term inventory. The inventory consists of names of species, amongst which naming variations are prevalent. We apply a number of distributional semantic techniques on all of the titles in the Biodiversity Heritage Library, to compute semantic similarity between species names and support the automated construction of the resource. With the construction of our biodiversity term inventory, we demonstrate that distributional semantic models are able to identify semantically similar names that are not yet recorded in existing taxonomies. Such methods can thus be used to update existing taxonomies semi-automatically by deriving semantically related taxonomic names from a text corpus and allowing expert curators to validate them. We also evaluate our inventory as a means to improve search by facilitating automatic query expansion. Specifically, we developed a visual search interface that suggests semantically related species names, which are available in our inventory but not always in other repositories, to incorporate into the search query. An assessment of the interface by domain experts reveals that our query expansion based on related names is useful for increasing the number of relevant documents retrieved. Its exploitation can benefit both users and developers of search engines and text mining applications

    Lipoprotein(a) Genotype Influences the Clinical Diagnosis of Familial Hypercholesterolemia

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    Background Evidence suggests that LPA risk genotypes are a possible contributor to the clinical diagnosis of familial hypercholesterolemia (FH). This study aimed at determining the prevalence of LPA risk variants in adult individuals with FH enrolled in the Italian LIPIGEN (Lipid Transport Disorders Italian Genetic Network) study, with (FH/M+) or without (FH/M-) a causative genetic variant. Methods and ResultsAn lp(a) [lipoprotein(a)] genetic score was calculated by summing the number risk-increasing alleles inherited at rs3798220 and rs10455872 variants. Overall, in the 4.6% of 1695 patients with clinically diagnosed FH, the phenotype was not explained by a monogenic or polygenic cause but by genotype associated with high lp(a) levels. Among 765 subjects with FH/M- and 930 subjects with FH/M+, 133 (17.4%) and 95 (10.2%) were characterized by 1 copy of either rs10455872 or rs3798220 or 2 copies of either rs10455872 or rs3798220 (lp(a) score >= 1). Subjects with FH/M- also had lower mean levels of pretreatment low-density lipoprotein cholesterol than individuals with FH/M+ (t test for difference in means between FH/M- and FH/M+ groups <0.0001); however, subjects with FH/M- and lp(a) score >= 1 had higher mean (SD) pretreatment low-density lipoprotein cholesterol levels (223.47 [50.40] mg/dL) compared with subjects with FH/M- and lp(a) score=0 (219.38 [54.54] mg/dL for), although not statistically significant. The adjustment of low-density lipoprotein cholesterol levels based on lp(a) concentration reduced from 68% to 42% the proportion of subjects with low-density lipoprotein cholesterol level >= 190 mg/dL (or from 68% to 50%, considering a more conservative formula). ConclusionsOur study supports the importance of measuring lp(a) to perform the diagnosis of FH appropriately and to exclude that the observed phenotype is driven by elevated levels of lp(a) before performing the genetic test for FH

    a multi scalar approach to long term dynamics spatial relations and economic networks of roman secondary settlements in italy and the ombrone valley system southern tuscany towards a model

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    In Roman landscapes, the particular sites defined as secondary settlements (also known as vici/villages, minor centres, agglomerations secondaires and/or stationes/mansiones) have played an 'intermediary' role between the cities and other rural structures (villae/farms), linked to medium- and long-distance economic and commercial trajectories. The aim of this paper is to apply a multi-scalar approach to model their long-term spatial relationships and connectivity with the Mediterranean exchange network. On the macro-scale, we have analysed a sample of 219 reviewed sites to understand the diachronic trends and spatial dynamics of attraction/proximity to significant elements of the landscape such as towns, roads, rivers and coastline. The Ombrone Valley (Tuscany, Italy) represents a micro-scale case study of a complex system, in which the imported pottery (amphorae, African Red Slip ware, ingobbiata di rosso) found in the vicus/mansio of Santa Cristina in Caio, the Roman villa of La Befa and the town of Siena (Saena Iulia) provided diagnostic 'macroeconomic' perspectives. The results show how the secondary settlements occupied a nodal position in the Roman landscape in terms of resilience (long period of occupation until the Early Middle Ages) and spatial organization with a close relationship to natural and anthropic infrastructures and trade functions linked to Mediterranean routes
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