Plasticity in habitat use of two native Ponto-Caspian gobies, Proterorhinus semilunaris and Neogobius fluviatilis: implications for invasive populations

The Ponto-Caspian region is an important source area for some invasive gobiid fishes. These fishes have colonised several freshwater ecosystems in Europe, as well as in North America. As knowledge on their habitat utilisation in their native range remains limited, the seasonal habitat uses of Western tubenose goby, Proterorhinus semilunaris and monkey goby Neogobius fluviatilis were studied in four natural lakes in the Marmara Region (NW Turkey). Habitat use of both species was highly variable between the lakes and seasons, with P. semilunaris showing higher plasticity. In general, the main habitats used by P. semilunaris were shallow waters in littoral areas that had vegetation cover, whereas N. fluviatilis consistently used sandy substratum in deeper waters that lacked vegetation. These results suggested there was high plasticity in the habitat utilisation of these two gobiids, especially in P. semilunaris, which potentially facilitates their ability to establish and invade novel environments. The habitats that are especially vulnerable to P. semilunaris invasion are medium size substrates which provide individuals with sufficient interstitial space for refuge. Waters providing differing habitats, such as sandy substrata, might inhibit their colonisation, but are potentially more vulnerable to N. fluviatilis invasion

Trophic interactions of two Ponto-Caspian gobies in the Turkish part of their native range

Several Ponto-Caspian gobiids have expanded from their native distribution ranges to Europe and North America. As knowledge on their bio-ecological features in their native range is still limited, the trophic ecology of monkey goby Neogobius fluviatilis and Western tubenose goby Proterorhinus semilunaris was studied in three natural lakes in the Marmara Region of NW Turkey using the stable isotopes of δ13C and δ15N. In two of the lakes, the trophic niches (as the isotopic niche) of the gobies were highly divergent with co-existing native fishes, with no overlap. Moreover, mixing models suggests considerable inter-specific dietary differences. In all lakes, the trophic niches of gobies were never significantly larger than those of co-existing fishes. These results suggest that when introduced outside of their natural range, the gobies might integrate into new fish communities via exploiting resources that are underexploited by native fishes or will initially share resources with these species before their niches diverge, perhaps through competitive displacement

Plasticity in life history traits of the native Proterorhinus semilunaris suggests high adaptive capacity in its invasive range

Invasion risk assessments are reliant on ecological data that assist the predictions of whether an introduced species will adapt to novel conditions. Data from the native range of potential invaders can thus assist these assessments. Here, the growth and reproductive characteristics of the Western tubenose goby Proterorhinus semilunaris, a Ponto-Caspian gobiid, were assessed in three natural lakes in their native range, as there are few extant data on these traits. Across the three lakes, the gobies were found in varying abundances. Sex ratios varied, with females significantly outnumbering males in only one lake, with equal sex ratios in the other lakes. The fish always showed a positive allometric growth, but had high variability in their somatic growth rates and relative body conditions between the lakes. Scale ageing revealed all populations comprised individuals to age four years, with one lake having individuals to 5 years old. Reproductive characteristics, such as size at maturity, gonad-somatic index and fecundity, did not differ significantly between the lakes. These data suggest that plasticity in aspects of their life history traits provides P. semilunaris with considerable adaptive capacity following their introduction into novel conditions

Evidence of threat to European economy and biodiversity following the introduction of an alien pathogen on the fungal–animal boundary

Recent years have seen a global and rapid resurgence of fungal diseases with direct impact on biodiversity and local extinctions of amphibian, coral, or bat populations. Despite similar evidence of population extinction in European fish populations and the associated risk of food aquaculture due to the emerging rosette agent Sphaerothecum destruens, an emerging infectious eukaryotic intracellular pathogen on the fungal–animal boundary, our understanding of current threats remained limited. Long-term monitoring of population decline for the 8-year post-introduction of the fungal pathogen was coupled with seasonal molecular analyses of the 18S rDNA and histological work of native fish species organs. A phylogenetic relationship between the existing EU and US strains using the ribosomal internal transcribed spacer sequences was also carried out. Here, we provide evidence that this emerging parasite has now been introduced via Pseudorasbora parva to sea bass farms, an industry that represents over 400 M€ annually in a Mediterranean region that is already economically vulnerable. We also provide for the first time evidence linking S. destruens to disease and severe declines in International Union for Conservation of Nature threatened European endemic freshwater fishes (i.e. 80% to 90 % mortalities). Our findings are thus of major economic and conservation importance

Interactions of invasive pumpkinseed with a riverine endemic fish indicate trophic overlap but minimal consequences for somatic growth and condition

The North American invasive fish pumpkinseed Lepomis gibbosus has been associated with some detrimental ecological consequences in some parts of its invasive range. Here, we tested the trophic interactions of pumpkinseed with the endemic stream fish Aegean chub Squalius fellowesii ('chub') in a Mediterranean-type water course in SW Anatolia, Turkey, using a bulk stable isotope approach (d13C, d15N). Seven sampling sites were able to be grouped as chub in pumpkinseed presence (n=2) and absence (n=3), and pumpkinseed in chub absence (n=2). Across these groups, stable isotope metrics revealed that chub trophic (isotopic) niche size was similar in pumpkinseed presence/absence, but pumpkinseed had a larger niche in chub presence. In sites where they are co-habited, their niches showed some convergence, but with no apparent consequences for their growth or body condition, suggesting there were minimal ecological consequences of this sharing of food resources. These results suggest that the trophic consequences of this riverine invasion of pumpkinseed on this endemic chub was minimal

A benzene-degrading nitrate-reducing microbial consortium displays aerobic and anaerobic benzene degradation pathways

All sequence data from this study were deposited at the European Bioinformatics Institute under the accession numbers ERS1670018 to ERS1670023. Further, all assigned genes, taxonomy, function, sequences of contigs, genes and proteins can be found in Table S3.In this study, we report transcription of genes involved in aerobic and anaerobic benzene degradation pathways in a benzene-degrading denitrifying continuous culture. Transcripts associated with the family Peptococcaceae dominated all samples (2136% relative abundance) indicating their key role in the community. We found a highly transcribed gene cluster encoding a presumed anaerobic benzene carboxylase (AbcA and AbcD) and a benzoate-coenzyme A ligase (BzlA). Predicted gene products showed >96% amino acid identity and similar gene order to the corresponding benzene degradation gene cluster described previously, providing further evidence for anaerobic benzene activation via carboxylation. For subsequent benzoyl-CoA dearomatization, bam-like genes analogous to the ones found in other strict anaerobes were transcribed, whereas gene transcripts involved in downstream benzoyl-CoA degradation were mostly analogous to the ones described in facultative anaerobes. The concurrent transcription of genes encoding enzymes involved in oxygenase-mediated aerobic benzene degradation suggested oxygen presence in the culture, possibly formed via a recently identified nitric oxide dismutase (Nod). Although we were unable to detect transcription of Nod-encoding genes, addition of nitrite and formate to the continuous culture showed indication for oxygen production. Such an oxygen production would enable aerobic microbes to thrive in oxygen-depleted and nitrate-containing subsurface environments contaminated with hydrocarbons.This study was supported by a grant of BE-Basic-FES funds from the Dutch Ministry of Economic Affairs. The research of A.J.M. Stams is supported by an ERC grant (project 323009) and the gravitation grant “Microbes for Health and Environment” (project 024.002.002) of the Netherlands Ministry of Education, Culture and Science. F. Hugenholtz was supported by the same gravitation grant (project 024.002.002). B. Hornung is supported by Wageningen University and the Wageningen Institute for Environment and Climate Research (WIMEK) through the IP/OP program Systems Biology (project KB-17-003.02-023).info:eu-repo/semantics/publishedVersio

The evolving SARS-CoV-2 epidemic in Africa: insights from rapidly expanding genomic surveillance

Investment in SARS-CoV-2 sequencing in Africa over the past year has led to a major increase in the number of sequences generated, now exceeding 100,000 genomes, used to track the pandemic on the continent. Our results show an increase in the number of African countries able to sequence domestically, and highlight that local sequencing enables faster turnaround time and more regular routine surveillance. Despite limitations of low testing proportions, findings from this genomic surveillance study underscore the heterogeneous nature of the pandemic and shed light on the distinct dispersal dynamics of Variants of Concern, particularly Alpha, Beta, Delta, and Omicron, on the continent. Sustained investment for diagnostics and genomic surveillance in Africa is needed as the virus continues to evolve, while the continent faces many emerging and re-emerging infectious disease threats. These investments are crucial for pandemic preparedness and response and will serve the health of the continent well into the 21st century

Sensing the fuels: glucose and lipid signaling in the CNS controlling energy homeostasis

The central nervous system (CNS) is capable of gathering information on the body’s nutritional state and it implements appropriate behavioral and metabolic responses to changes in fuel availability. This feedback signaling of peripheral tissues ensures the maintenance of energy homeostasis. The hypothalamus is a primary site of convergence and integration for these nutrient-related feedback signals, which include central and peripheral neuronal inputs as well as hormonal signals. Increasing evidence indicates that glucose and lipids are detected by specialized fuel-sensing neurons that are integrated in these hypothalamic neuronal circuits. The purpose of this review is to outline the current understanding of fuel-sensing mechanisms in the hypothalamus, to integrate the recent findings in this field, and to address the potential role of dysregulation in these pathways in the development of obesity and type 2 diabetes mellitus

Intraperitoneal drain placement and outcomes after elective colorectal surgery: international matched, prospective, cohort study

Despite current guidelines, intraperitoneal drain placement after elective colorectal surgery remains widespread. Drains were not associated with earlier detection of intraperitoneal collections, but were associated with prolonged hospital stay and increased risk of surgical-site infections.Background Many surgeons routinely place intraperitoneal drains after elective colorectal surgery. However, enhanced recovery after surgery guidelines recommend against their routine use owing to a lack of clear clinical benefit. This study aimed to describe international variation in intraperitoneal drain placement and the safety of this practice. Methods COMPASS (COMPlicAted intra-abdominal collectionS after colorectal Surgery) was a prospective, international, cohort study which enrolled consecutive adults undergoing elective colorectal surgery (February to March 2020). The primary outcome was the rate of intraperitoneal drain placement. Secondary outcomes included: rate and time to diagnosis of postoperative intraperitoneal collections; rate of surgical site infections (SSIs); time to discharge; and 30-day major postoperative complications (Clavien-Dindo grade at least III). After propensity score matching, multivariable logistic regression and Cox proportional hazards regression were used to estimate the independent association of the secondary outcomes with drain placement. Results Overall, 1805 patients from 22 countries were included (798 women, 44.2 per cent; median age 67.0 years). The drain insertion rate was 51.9 per cent (937 patients). After matching, drains were not associated with reduced rates (odds ratio (OR) 1.33, 95 per cent c.i. 0.79 to 2.23; P = 0.287) or earlier detection (hazard ratio (HR) 0.87, 0.33 to 2.31; P = 0.780) of collections. Although not associated with worse major postoperative complications (OR 1.09, 0.68 to 1.75; P = 0.709), drains were associated with delayed hospital discharge (HR 0.58, 0.52 to 0.66; P < 0.001) and an increased risk of SSIs (OR 2.47, 1.50 to 4.05; P < 0.001). Conclusion Intraperitoneal drain placement after elective colorectal surgery is not associated with earlier detection of postoperative collections, but prolongs hospital stay and increases SSI risk

Study of the doubly Cabibbo-suppressed decays Ds+→K+K+π−D^+_s\to K^+K^+\pi^- and Ds+→K+K+π−π0D^+_s\to K^+K^+\pi^-\pi^0

Based on 7.33 fb$^{-1}$ of $e^+e^-$ collision data collected at center-of-mass energies between 4.128 and 4.226 GeV with the BESIII detector, the experimental studies of the doubly Cabibbo-suppressed decays $D^+_s\to K^+K^+\pi^-$ and $D^+_s\to K^+K^+\pi^-\pi^0$ are reported. We determine the absolute branching fraction of $D^+_s\to K^+K^+\pi^-$ to be (${1.23^{+0.28}_{-0.25}}({\rm stat})\pm0.06({\rm syst})$) $\times 10^{-4}$. No significant signal of $D^+_s\to K^+K^+\pi^-\pi^0$ is observed and the upper limit on its decay branching fraction at 90\% confidence level is set to be $1.7\times10^{-4}$.Comment: 10 pages, 4 figures, 4 table