Seasonal measurements of total OH reactivity fluxes, total ozone loss rates and missing emissions from Norway spruce in 2011 [Discussion paper]

Numerous reactive volatile organic compounds (VOCs) are emitted into the atmosphere by vegetation. Most biogenic VOCs are highly reactive towards the atmosphere's most important oxidant, the hydroxyl (OH) radical. One way to investigate the chemical interplay between biosphere and atmosphere is through the measurement of total OH reactivity, the total loss rate of OH radicals. This study presents the first determination of total OH reactivity emission rates (measurements via the Comparative Reactivity Method) based on a branch cuvette enclosure system mounted on a Norway spruce (Picea abies) throughout spring, summer and autumn 2011. In parallel separate VOC emission rates were monitored by a Proton Transfer Reaction-Mass Spectrometer (PTR-MS), and total ozone (O3) loss rates were obtained inside the cuvette. Total OH reactivity emission rates were in general temperature and light dependent, showing strong diel cycles with highest values during daytime. Monoterpene emissions contributed most, accounting for 56–69% of the measured total OH reactivity flux in spring and early summer. However, during late summer and autumn the monoterpene contribution decreased to 11–16%. At this time, a large missing fraction of the total OH reactivity emission rate (70–84%) was found when compared to the VOC budget measured by PTR-MS. Total OH reactivity and missing total OH reactivity emission rates reached maximum values in late summer corresponding to the period of highest temperature. Total O3 loss rates within the closed cuvette showed similar diel profiles and comparable seasonality to the total OH reactivity fluxes. Total OH reactivity fluxes were also compared to emissions from needle storage pools predicted by a temperature-only dependent algorithm. Deviations of total OH reactivity fluxes from the temperature-only dependent emission algorithm were observed for occasions of mechanical and heat stress. While for mechanical stress, induced by strong wind, measured VOCs could explain total OH reactivity emissions, during heat stress they could not. The temperature driven algorithm matched the diel course much better in spring than in summer, indicating a different production and emission scheme for summer and early autumn. During these times, unmeasured and possibly unknown primary biogenic emissions contributed significantly to the observed total OH reactivity flux

Seasonal measurements of total OH reactivity emission rates from Norway spruce in 2011

Numerous reactive volatile organic compounds (VOCs) are emitted into the atmosphere by vegetation. Most biogenic VOCs are highly reactive towards the atmosphere's most important oxidant, the hydroxyl (OH) radical. One way to investigate the chemical interplay between biosphere and atmosphere is through the measurement of total OH reactivity, the total loss rate of OH radicals. This study presents the first determination of total OH reactivity emission rates (measurements via the comparative reactivity method) based on a branch cuvette enclosure system mounted on a Norway spruce (Picea abies) throughout spring, summer and autumn 2011. In parallel VOC emission rates were monitored by a second proton-transfer-reaction mass spectrometer (PTR-MS), and total ozone (O3) loss rates were obtained inside the cuvette. Total OH reactivity emission rates were in general temperature and light dependent, showing strong diel cycles with highest values during daytime. Monoterpene emissions contributed most, accounting for 56–69% of the measured total OH reactivity flux in spring and early summer. However, during late summer and autumn the monoterpene contribution decreased to 11–16%. At this time, a large missing fraction of the total OH reactivity emission rate (70–84%) was found when compared to the VOC budget measured by PTR-MS. Total OH reactivity and missing total OH reactivity emission rates reached maximum values in late summer corresponding to the period of highest temperature. Total O3 loss rates within the closed cuvette showed similar diel profiles and comparable seasonality to the total OH reactivity fluxes. Total OH reactivity fluxes were also compared to emissions from needle storage pools predicted by a temperature-only-dependent algorithm. Deviations of total OH reactivity fluxes from the temperature-only-dependent emission algorithm were observed for occasions of mechanical and heat stress. While for mechanical stress, induced by strong wind, measured VOCs could explain total OH reactivity emissions, during heat stress they could not. The temperature-driven algorithm matched the diel variation of total OH reactivity emission rates much better in spring than in summer, indicating a different production and emission scheme for summer and early autumn. During these times, unmeasured and possibly unknown primary biogenic emissions contributed significantly to the observed total OH reactivity flux

Unexpected seasonality in quantity and composition of Amazon rainforest air reactivity

The hydroxyl radical (OH) removes most atmospheric pollutants from air. The loss frequency of OH radicals due to the combined effect of all gas-phase OH reactive species is a measureable quantity termed total OH reactivity. Here we present total OH reactivity observations in pristine Amazon rainforest air, as a function of season, time-of-day and height (0-80 m). Total OH reactivity is low during wet (10s-1) and high during dry season (62s-1). Comparison to individually measured trace gases reveals strong variation in unaccounted for OH reactivity, from 5 to 15% missing in wet-season afternoons to mostly unknown (average 79%) during dry season. During dry-season afternoons isoprene, considered the dominant reagent with OH in rainforests, only accounts for ∼20% of the total OH reactivity. Vertical profiles of OH reactivity are shaped by biogenic emissions, photochemistry and turbulent mixing. The rainforest floor was identified as a significant but poorly characterized source of OH reactivity

Diel and seasonal changes of biogenic volatile organic compounds within and above an Amazonian rainforest

The Amazonian rainforest is a large tropical ecosystem, which is one of the last pristine continental terrains. This ecosystem is ideally located for the study of diel and seasonal behaviour of biogenic volatile organic compounds (BVOCs) in the absence of local human interference. In this study, we report the first atmospheric BVOC measurements at the Amazonian Tall Tower Observatory (ATTO) site, located in central Amazonia. A quadrupole proton-transfer-reaction mass spectrometer (PTR-MS), with seven ambient air inlets, positioned from near ground to about 80 m (0.05, 0.5, 4, 24, 38, 53 and 79 m above the forest floor), was deployed for BVOC monitoring. We report diel and seasonal (February-March 2013 as wet season and September 2013 as dry season) ambient mixing ratios for isoprene, monoterpenes, isoprene oxidation products, acetaldehyde, acetone, methyl ethyl ketone (MEK), methanol and acetonitrile. Clear diel and seasonal patterns were observed for all compounds. In general, lower mixing ratios were observed during night, while maximum mixing ratios were observed during the wet season (February-March 2013), with the peak in solar irradiation at 12:00 LT (local time) and during the dry season (September 2013) with the peak in temperature at 16:00 LT. Isoprene and monoterpene mixing ratios were the highest within the canopy with a median of 7.6 and 1 ppb, respectively (interquartile range (IQR) of 6.1 and 0.38 ppb) during the dry season (at 24 m, from 12:00 to 15:00 LT). The increased contribution of oxygenated volatile organic compounds (OVOCs) above the canopy indicated a transition from dominating forest emissions during the wet season (when mixing ratios were higher than within the canopy), to a blend of biogenic emission, photochemical production and advection during the dry season when mixing ratios were higher above the canopy. Our observations suggest strong seasonal interactions between environmental (insolation, temperature) and biological (phenology) drivers of leaf BVOC emissions and atmospheric chemistry. Considerable differences in the magnitude of BVOC mixing ratios, as compared to other reports of Amazonian BVOC, demonstrate the need for long-term observations at different sites and more standardized measurement procedures, in order to better characterize the natural exchange of BVOCs between the Amazonian rainforest and the atmosphere. © Author(s) 2015

The Amazon Tall Tower Observatory (ATTO): Overview of pilot measurements on ecosystem ecology, meteorology, trace gases, and aerosols

The Amazon Basin plays key roles in the carbon and water cycles, climate change, atmospheric chemistry, and biodiversity. It has already been changed significantly by human activities, and more pervasive change is expected to occur in the coming decades. It is therefore essential to establish long-term measurement sites that provide a baseline record of present-day climatic, biogeochemical, and atmospheric conditions and that will be operated over coming decades to monitor change in the Amazon region, as human perturbations increase in the future. The Amazon Tall Tower Observatory (ATTO) has been set up in a pristine rain forest region in the central Amazon Basin, about 150 km northeast of the city of Manaus. Two 80 m towers have been operated at the site since 2012, and a 325 m tower is nearing completion in mid-2015. An ecological survey including a biodiversity assessment has been conducted in the forest region surrounding the site. Measurements of micrometeorological and atmospheric chemical variables were initiated in 2012, and their range has continued to broaden over the last few years. The meteorological and micrometeorological measurements include temperature and wind profiles, precipitation, water and energy fluxes, turbulence components, soil temperature profiles and soil heat fluxes, radiation fluxes, and visibility. A tree has been instrumented to measure stem profiles of temperature, light intensity, and water content in cryptogamic covers. The trace gas measurements comprise continuous monitoring of carbon dioxide, carbon monoxide, methane, and ozone at five to eight different heights, complemented by a variety of additional species measured during intensive campaigns (e.g., VOC, NO, NO2, and OH reactivity). Aerosol optical, microphysical, and chemical measurements are being made above the canopy as well as in the canopy space. They include aerosol light scattering and absorption, fluorescence, number and volume size distributions, chemical composition, cloud condensation nuclei (CCN) concentrations, and hygroscopicity. In this paper, we discuss the scientific context of the ATTO observatory and present an overview of results from ecological, meteorological, and chemical pilot studies at the ATTO site. © Author(s) 2015

Total OH reactivity measurements at the biosphere-atmosphere interface

The biosphere emits copiously volatile organic compounds (VOCs) into the atmosphere, which are removed again depending on the oxidative capacity of the atmosphere and physical processes such as mixing, transport and deposition. Biogenic VOCs react with the primary oxidant of the atmosphere, the hydroxyl radical (OH), and potentially lead to the formation tropospheric ozone and aerosol, which impact regional climate and air quality. The rate of OH decay in the atmosphere, the total OH reactivity is a function of the atmospheric, reactive compound's concentration and reaction velocity with OH. One way to measure the total OH reactivity, the total OH sink, is with the Comparative Reactivity Method - CRM. Basically, the reaction of OH with a reagent (here pyrrole) in clean air and in the presence of atmospheric, reactive molecules is compared. This thesis presents measurements of the total OH reactivity at the biosphere-atmosphere interface to analyze various influences and driving forces. For measurements in natural environment the instrument was automated and a direct, undisturbed sampling method developed. Additionally, an alternative detection system was tested and compared to the originally used detector (Proton Transfer Reaction-Mass Spectrometer, PTR-MS). The GC-PID (Gas Chromatographic Photo-Ionization Detector) was found as a smaller, less expensive, and robust alternative for total OH reactivity measurements. The HUMPPA-COPEC 2010 measurement campaign in the Finish forest was impacted by normal boreal forest emissions as well as prolonged heat and biomass burning emissions. The measurement of total OH reactivity was compared with a comprehensive set of monitored individual species ambient concentration levels. A significant discrepancy between those individually measured OH sinks and the total OH reactivity was observed, which was characterized in detail by the comparison of within and above the forest canopy detected OH reactivity. Direct impact of biogenic emissions on total OH reactivity was examined on Kleiner Feldberg, Germany, 2011. Trans-seasonal measurements of an enclosed Norway spruce branch were conducted via PTR-MS, for individual compound's emission rates, and CRM, for total OH reactivity emission fluxes. Especially during summertime, the individually monitored OH sink terms could not account for the measured total OH reactivity. A controlled oxidation experiment in a low NOx environment was conducted in the EUPHORE reaction chamber (CHEERS, Spain 2011). The concentration levels of the reactant isoprene and its major products were monitored and compared to total OH reactivity measurements as well as to the results of two models. The individually measured compounds could account for the total OH reactivity during this experiment as well as the traditional model-degradation scheme for isoprene (MCM 3.2). Due to previous observations of high OH levels in the isoprene-rich environment of the tropics, a novel isoprene mechanism was recently suggested. In this mechanism (MIME v4) additional OH is generated during isoprene oxidation, which could not be verified in the conditions of the CHEERS experiment.Die Biosphäre emittiert eine Vielzahl an flüchtigen Kohlenwasserstoffen in die Atmosphäre, welche durch chemische Oxidationsreaktionen, sowie Transport oder Deposition wieder aus der Atmosphäre entfernt werden. Durch die Reaktion zwischen biogenen Emissionen und dem Hydroxyl-Radikal (OH), dem wichtigsten Oxidationsmittel in der Atmosphäre, können troposphärisches Ozon und Aerosole entstehen, welche regional Klima und Luftqualität beeinflussen. Die gesamte OH Senke, abhängig von Konzentration und Reaktionsgeschwindigkeit aller reaktiver Substanzen in der Atmosphäre, kann direkt als totale OH Reaktivität gemessen werden. Ein Verfahren zur Messung der OH Reaktivität ist die Comparative Reactivity Method - CRM. Diese Methode vergleicht die Reaktion eines bestimmten Moleküls (hier Pyrrol) mit OH in sauberer und atmosphärischer, reaktiver Luft. In dieser Arbeit wurden Messungen der OH Reaktivität zwischen Biosphäre und Atmosphäre durchgeführt, um verschiedenste Einflüsse und Schlüsselfaktoren zu charakterisieren. Für Messungen in natürlicher Umgebung wurde die bereits vorhandene Methode automatisiert, eine direkte, kontaminationsfreie Probennahme ermöglicht und neben dem ursprünglichen Detektor (Protonen-Transfer-Reaktions-Massenspektrometrie, PTR-MS) wurde eine kompakte und günstige Alternative getestet. Der GC-PID (Gaschromatograph-Photoionisationdetektor) ist für zukünftige Projekte eine zuverlässige und einfach anwendbare Technik zur Messung der OH Reaktivität. Die Feldmesskampagne HUMPPA-COPEC 2010 im finnischen Wald war neben typischen borealen Einflüssen von langanhaltender Hitze und Waldbränden geprägt. Der Vergleich von Messungen der atmosphärischen Mischungsverhältnisse einzelner biogener Emissionen, einiger ihrer Oxidationsprodukte und weiteren Spurengasen mit der Messung der OH Reaktivität zeigte signifikante Diskrepanzen. Diese unerklärte OH Senke konnte im Detail untersucht werden, da die OH Reaktivität in und über der Baumkrone gemessen wurde. Der direkte Einfluss von biogenen Emissionen auf die atmosphärische OH Reaktivität wurde in einer Studie am Kleinen Feldberg (Taunus, Deutschland) von Frühling bis Herbst 2011 untersucht. Der Ast einer Fichte wurde mit einer Küvette umschlossen, und die emittierte OH Reaktivität mit den Emissionsraten bekannter biogener flüchtiger Kohlenwasserstoffe verglichen. Vor allem im Sommer konnten diese die gemessene OH Reaktivität nicht vollständig erklären. Während der kontrollierten Oxidation von Isopren mit OH in der EUPHORE Reaktionskammer (CHEERS, Spanien 2011) wurde neben Isopren und seinen Produkten auch die OH Reaktivität gemessen. Außerdem wurden die Messwerte mit den Ergebnissen von zwei unterschiedlichen Model-Simulationen verglichen. Gute Übereinstimmung zwischen der OH Reaktivität, den Einzelkomponenten und dem traditionellen Isopren-Mechanismus im Model (MCM 3.2) konnte beobachtet werden. Frühere Feldmessungen in den Tropen fanden erhöhte OH Konzentrationen in Isopren-dominierter Umgebung. Dies wurde in einem neuen Isopren-Mechanismus umgesetzt, indem während der Isopren-Oxidation zusätzlich OH generiert wird. Dieser Mechanismus (MIME v4) konnte in den getesteten Bedingungen, während des CHEERS Experiments, nicht bestätigt werden

Towards a quantitative understanding of total OH reactivity: A review

Over the past fifty years, considerable efforts have been devoted to measuring the concentration and chemical speciation of volatile organic compounds (VOCs) in ambient air and emissions. Recently, it has become possible to directly determine the overall effect of atmospheric trace gases on the oxidant hydroxyl radicals (OH), by measuring OH reactivity (OH loss frequency). Quantifying total OH reactivity is one way to characterize the roles of VOCs in formation of ground-level ozone and secondary organic aerosols (SOA). Approaches for measuring total OH reactivity in both emissions and ambient air have been progressing and have been applied in a wide range of studies. Here we evaluate the main techniques used to measure OH reactivity, including two methods directly measuring OH decay and one comparative reactivity method (CRM), and summarize the existing experimental and modeling studies. Total OH reactivity varies significantly on spatial, diurnal, seasonal and vertical bases. Comparison with individually detected OH sinks often reveals a significant missing reactivity, ranging from 20% to over 80% in some environments. Missing reactivity has also been determined in most source emission studies. These source measurements, as well as numerical models, have indicated that both undetected primary emissions and unmeasured secondary products could contribute to missing reactivity. A quantitative understanding of total OH reactivity of various sources and ambient environments will enhance our understanding of the suite of compounds found in emissions as well as chemical processes, and will also provide an opportunity for the improvement of atmospheric chemical mechanisms