Near resonance acoustic scattering from organized schools of juvenile Atlantic bluefin tuna (Thunnus thynnus)

Schools of Atlantic bluefin tuna (Thunnus thynnus) can exhibit highly organized spatial structure within the school. This structure was quantified for dome shaped schools using both aerial imagery collected from a commercial spotter plane and 400 kHz multibeam echo sounder data collected on a fishing vessel in 2009 in Cape Cod Bay, MA. Observations from one school, containing an estimated 263 fish within an approximately ellipsoidal volume of 1900 m3, were used to seed an acoustic model that estimated the school target strength at frequencies between 10 and 2000 Hz. The fish\u27s swimbladder resonance was estimated to occur at approximately 50 Hz. The acoustic model examined single and multiple scattering solutions and also a completely incoherent summation of scattering responses from the fish. Three levels of structure within the school were examined, starting with fish locations that were constrained by the school boundaries but placed according to a Poisson process, then incorporating a constraint on the distance to the nearest neighbor, and finally adding a constraint on the bearing to the nearest neighbor. Results suggest that both multiple scattering and spatial organization within the school should be considered when estimating the target strength of schools similar to the ones considered here

Utilizing gene therapy methods to probe the genetic requirements to prevent spinal muscular atrophy /

Includes vita.Spinal Muscular Atrophy is clinically recognized as a progressive weakness within the trunk and proximal limbs that will lead to breathing failure and death within infants. As a neurodegenerative genetic disease, SMA is caused by loss of motor neurons, which in turn is caused by low levels of the Survival Motor Neuron (SMN) protein. The mechanism by which a ubiquitously expressed protein such as SMN is able to cause the specific death of motor neurons is highly debated and of great interest. Work presented here focuses on understanding the biological requirements of SMN and its downstream effects on the neuromuscular junction. To this end we utilize viral based gene delivery as a powerful tool to assess the effects of genes of interest in vivo. Our findings contribute to the conversation regarding whether SMA is truly a "motor neuron" disease, suggesting that astrocytes play a meaningful role in staving off SMA. Further, we investigate the domains within SMN needed to maintain its function in a mammalian system. We take a novel and challenging approach to identify a minimal domain capable of maintaining function. Finally, we demonstrate the practical use of morophological analysis of the neuromuscular junction as a means to characterize SMA pathology.Dr. Christian L. Lorson, Dissertation Supervisor.|Includes vita.Includes bibliographical references (191-210 pages)

A Statistical Analysis for Estimating Fish Number Density with the Use of a Multibeam Echosounder

Fish number density can be estimated from the normalized second moment of acoustic backscatter intensity [Denbigh et al., J. Acoust. Soc. Am. 90, 457-469 (1991)]. This method assumes that the distribution of fish scattering amplitudes is known and that the fish are randomly distributed following a Poisson volume distribution within regions of constant density. It is most useful at low fish densities, relative to the resolution of the acoustic device being used, since the estimators quickly become noisy as the number of fish per resolution cell increases. New models that include noise contributions are considered. The methods were applied to an acoustic assessment of juvenile Atlantic Bluefin Tuna, Thunnus thynnus. The data were collected using a 400 kHz multibeam echo sounder during the summer months of 2009 in Cape Cod, MA. Due to the high resolution of the multibeam system used, the large size (approx. 1.5 m) of the tuna, and the spacing of the fish in the school, we expect there to be low fish densities relative to the resolution of the multibeam system. Results of the fish number density based on the normalized second moment of acoustic intensity are compared to fish packing density estimated using aerial imagery that was collected simultaneously

Rhizon sampler alteration of deep ocean sediment interstitial water samples, as indicated by chloride concentration and oxygen and hydrogen isotopes

Despite their potential to inform past ocean salinity, δ^(18)O, and temperature, high-resolution depth profiles of interstitial water chloride concentration and hydrogen and oxygen isotopes exist in very few locations. One of the primary limitations to the recovery of these depth profiles is that traditional interstitial water sampling requires 5–10 cm whole rounds of the sediment core, which has the potential to interfere with stratigraphic continuity. The Rhizon sampler, a nondestructive tool developed for terrestrial sediment interstitial water extraction, has been proposed for efficient and nondestructive sampling of ocean sediment pore waters. However, there exists little documentation on the reliability and performance of Rhizon samplers in deep ocean sediments, particularly in regard to their effect on chloride concentration and oxygen and hydrogen isotopic measurements. We perform an intercomparison of chloride concentration and oxygen and hydrogen isotopic composition in samples taken using traditional squeezing versus those taken with Rhizon samplers. We find that samples taken with Rhizons have positive biases in both chloride concentration and stable isotopic ratios relative to those taken by squeezing water from sediments in a hydraulic press. The measured offsets between Rhizon and squeeze samples are consistent with a combination of absorption by and diffusive fractionation through the hydrophilic membrane of the Rhizon sampler. These results suggest caution is needed when using Rhizons for sampling interstitial waters in any research of processes that leave a small signal-to-noise ratio in dissolved concentrations or isotope ratios

The Traveling Libraries of North Carolina

This paper presents a qualitative, historical study of the characterization and doctrinal basis of the activities of the North Carolina Library Commission and its Traveling Libraries. It examines service to rural libraries and the delineation and contest between state responsibility and municipal or county responsibility for instituting public libraries.Master of Science in Library Scienc

The Information Content of Pore Fluid δ^(18)O and [CI^-]

Paleoceanographic proxies indicate that the ocean state during the Last Glacial Maximum (LGM) differed from the modern ocean state. Depth profiles of ocean sediment pore fluid δ^(18)O and [Cl^−] have been used to reconstruct the δ^(18)O and salinity at the LGM. Here, it is investigated whether pore fluid profiles can constrain ocean δ^(18)O and salinity at other times and, simultaneously, their ability to constrain the LGM δ^(18)O and salinity. An inverse framework is developed that relies on Bayesian parameter estimation, thus allowing formal separation of prior assumptions from the information in observations. Synthetic problems are used to explore the information about past ocean tracers that can be recovered from pore fluid profiles. It is concluded that prior knowledge of deep ocean mixing time scales is essential to an accurate inverse estimate of LGM ocean salinity and δ^(18)O from modern pore fluid profiles. The most recent 10 000 years of ocean salinity and δ^(18)O and the error in their estimates are better constrained by the pore fluid profiles than are the LGM values. The inverse estimate of salinity and δ^(18)O is strongly correlated with the estimate of diffusivity of oxygen isotopes and [Cl^−] in sediment pore fluids. Uncertainty on the diffusivity of oxygen isotopes and chloride in sediments is reduced through inversion of the pore fluid profiles, but simultaneous estimation of δ^(18)O or salinity and diffusivity increases the total uncertainty. The error reported in previous work may underestimate the true uncertainty of LGM deep ocean salinity and δ^(18)O

Rhizon sampler alteration of deep ocean sediment interstitial water samples, as indicated by chloride concentration and oxygen and hydrogen isotopes

Despite their potential to inform past ocean salinity, δ18O, and temperature, high-resolution depth profiles of interstitial water chloride concentration and hydrogen and oxygen isotopes exist in very few locations. One of the primary limitations to the recovery of these depth profiles is that traditional interstitial water sampling requires 5–10 cm whole rounds of the sediment core, which has the potential to interfere with stratigraphic continuity. The Rhizon sampler, a nondestructive tool developed for terrestrial sediment interstitial water extraction, has been proposed for efficient and nondestructive sampling of ocean sediment pore waters. However, there exists little documentation on the reliability and performance of Rhizon samplers in deep ocean sediments, particularly in regard to their effect on chloride concentration and oxygen and hydrogen isotopic measurements. We perform an intercomparison of chloride concentration and oxygen and hydrogen isotopic composition in samples taken using traditional squeezing versus those taken with Rhizon samplers. We find that samples taken with Rhizons have positive biases in both chloride concentration and stable isotopic ratios relative to those taken by squeezing water from sediments in a hydraulic press. The measured offsets between Rhizon and squeeze samples are consistent with a combination of absorption by and diffusive fractionation through the hydrophilic membrane of the Rhizon sampler. These results suggest caution is needed when using Rhizons for sampling interstitial waters in any research of processes that leave a small signal-to-noise ratio in dissolved concentrations or isotope ratios

Environmental Impact Assessment: Waypoint Park

The COB plans to develop a park along the Whatcom Waterway called Waypoint Park. The park will include the creation of a beach area, native vegetation, open lawn spaces, pedestrian walkways, a play structure and an Acid Ball art piece from the former Georgia Pacific pulp and tissue mill. Waypoint Park will serve to improve shoreline ecological functions, provide public access and recreation opportunities along the waterfront and connect the waterfront to the central business district (CBD) of downtown Bellingham. The park is part of the Waterfront District Subarea Plan (SAP) approved by the Bellingham City Council in December 2013