Motile Aeromonas septicaemia of farmed Rana spp

The bacteria associated with septicaemic disease of farmed frogs in Thailand were investigated. A group of motile aeromonads, designated Au {Aeromonas unspeciated), was unusually homogeneous in their biochemical reactions for a geographically diverse collection, notably none of the Au isolates utilised sucrose. Bacteria conforming to the phenotypic reactions of Aeromonas hydrophila and Aeromonas sobria were isolated from the skin and intestine of disea.sed and clinically normal frogs but only Au isolates were found internally in septicaemic frogs. The DNA relatedness of the collection of aeromonads was examined using randomly amplified polymorphic DNA (RAPD) and 16s rDNA sequencing. RAPD analysis produced very consistent banding patterns for the Au isolates whilst producing scattered profiles for type strains and other aeromonads from Thailand. The RAPD profiles showed that the Au isolates were all closely related tOi4. hydrophila (HGl) but were more closely related to each other. 16s rDNA sequence analysis revealed that in the hypervariable region V3 of the 16s rDNA gene all the Au isolates were identical and differed from all previously published Aeromonas sequences. The phenotypic and genotypic findings strongly suggest that Au is a previously unspeciated motile aeromonad. Histological examination of tissues from frogs affected by acute Au septicaemia revealed widespread vascular congestion, severe cardiac myopathy and pulmonary, renal, hepatic and splenic necrosis. In pathogenicity studies, clinically normal animals challenged with Au, by both injection and bath challenge, developed acute septicaemic disease and yielded pure cultures of Au on bacteriological examination. Haemolysin activities against frog RBC were significantly different within the collection of aeromonads. Groups of high haemolytic activity (unspeciated Aeromonas, Au), moderate haemolytic activity (A. hydrophila) and low haemolytic activity (A. veronii biovar sobria, A. veronii biovar veronii, A. caviae, A. schubertii) were noted. DNA colony hybridisation studies revealed that Au isolates possessed a haemolysin gene (ASH1) which was not present in any other Thai aeromonads or type strains tested. Cells from rainbow trout were extremely sensitive to Au toxins but less so to toxins produced by other species. In contrast mammalian cells showed very little sensitivity to Au toxins but were more sensitive to toxins produced by A. hydrophilia. The selection of suitable assay substrates is therefore very important; cells from homeotherms may be insensitive to cytotoxins associated with pathogenic processes in poikilotherms

The Shuffleboard Game: Effects of social drinking on mood and risky behaviour

Objective: Existing research examining how social forces and alcohol interact to impact risky behaviours has yielded contrasting findings, possibly due to the nature and variety of risk-taking tasks used and the failure to consider the role of emotion. Using a novel risk-task, akin to real world drinking games, this study examines the effect of intoxication and group contexts on risk-taking, considering mediating effects of mood. Method: 132 social drinkers (83 female) consumed an alcoholic (0.8g/kg) or placebo beverage before participating in the shuffleboard game (designed to mimic real drinking games) either individually (N = 66) or in the presence of two friends (N = 66). Mood was assessed before and after beverage consumption. Results: When controlling for group identity, intoxication (versus placebo) was associated with significantly higher risk-taking, although there was no impact of group context. No interaction between context and intoxication was observed, and mood did not mediate this relationship. Conclusions: Intoxication increases risk-taking behaviour regardless of whether an individual is in a group, or isolated, whereas groups do not appear to enhance risky behaviour. Previous evidence of an effect of groups on risk-taking may have been due to a failure to control for the effect of group identity. To reduce risky behaviours, interventions may benefit from targeting alcohol use while considering how pre-existing social norms within a friendship group may either mitigate or exacerbate risk. Results affirm the importance of considering both intoxication and group effects on affective states when investigating risk-taking behaviours

Exophiala angulospora infection in hatchery reared lumpfish (Cyclopterus lumpus) broodstock

Funding Information Biotechnology and Biological Sciences Research Council. Grant Numbers: BB/M026566/1, BB/P020224/1 Natural Environment Research Council. Grant Number: NE/P007570/1 University of AberdeenPeer reviewedPublisher PD

Views and experiences of opioid access amongst palliative care providers and public representatives in a low-resource setting: A qualitative interview study

AbstractOpioids (e.g. morphine) are affordable, effective interventions for cancer-related pain. However, equity of access to this key medication remains a global challenge, particularly in low- and middle-income countries. We aimed to explore views of palliative care providers and public-representatives about opioid analgesia access in two States in India. We conducted a qualitative study using semi-structured interviews. Transcribed audio-recordings were subjected to thematic analysis using a Framework Approach. Palliative care providers and public-representatives were purposively sampled from services reporting consistent opioid availability and prescribing (≥4kg per annum) from Karnataka and Kerala. Twenty participants (doctors (10), nurses (4), pharmacists (2), service managers (2) and public-representatives (2) were interviewed. Three themes were identified: 1) Attitudes and awareness: opioid treatments are perceived as end-of-life (last days/weeks) interventions; fears of addiction and misunderstanding of pain management goals limit access. 2) Expected and unexpected inequities: patients/carers from lower socioeconomic strata accept doctor recommendations if opioids are affordable, more educated patients/families have reservations about opioids, delay access and perceive expensive medicines as better. Non-palliative care specialist doctors have negative entrenched views and require specialist training. 3) Experiential learning–positive experiences can positively alter attitudes (e.g., participants in Kerala report improved attitudes, awareness and understanding influenced by exposure and community awareness, but experience can also reinforce perceptions as end-of-life care. Entrenched negative views are reinforced by poor experiences while positive experiences improve attitudes. To promote access, opioid prescribing must be needs-based rather than prognosis-based. Addressing the lack of training for non-palliative care workforce would help overcome a major barrier

The shuffleboard game: investigating group drinking, mood, and risky behavior

Objective: Existing research examining how social forces and alcohol interact to impact risky behaviors has yielded contrasting findings, possibly due to the nature and variety of risk-taking tasks used and the failure to consider the role of emotion. Using a novel risk task, akin to real-world drinking games, this study examines the effect of intoxication and group contexts on risk-taking, considering mediating effects of mood. Method: One hundred thirty-two social drinkers (83 females) consumed an alcoholic (0.8 g/kg) or placebo beverage before participating in the shuffleboard game (designed to mimic real drinking games) either individually (N = 66) or in the presence of two friends (N = 66). Mood was assessed before and after beverage consumption. Results: When controlling for group identity, intoxication (vs. placebo) was associated with significantly higher risk-taking, although there was no impact of group context. No interaction between context and intoxication was observed, and mood did not mediate this relationship. Conclusions: Intoxication increases risk-taking behavior regardless of whether an individual is in a group, or isolated, whereas groups do not appear to enhance risky behavior. Previous evidence of an effect of groups on risk-taking may have been due to a failure to control for the effect of group identity. To reduce risky behaviors, interventions may benefit from targeting alcohol use while considering how preexisting social norms within a friendship group may either mitigate or exacerbate risk. Results affirm the importance of considering both intoxication and group effects on affective states when investigating risk-taking behaviors

A deep learning approach to photo–identification demonstrates high performance on two dozen cetacean species

We thank the countless individuals who collected and/or processed the nearly 85,000 images used in this study and those who assisted, particularly those who sorted these images from the millions that did not end up in the catalogues. Additionally, we thank the other Kaggle competitors who helped develop the ideas, models and data used here, particularly those who released their datasets to the public. The graduate assistantship for Philip T. Patton was funded by the NOAA Fisheries QUEST Fellowship. This paper represents HIMB and SOEST contribution numbers 1932 and 11679, respectively. The technical support and advanced computing resources from University of Hawaii Information Technology Services—Cyberinfrastructure, funded in part by the National Science Foundation CC* awards # 2201428 and # 2232862 are gratefully acknowledged. Every photo–identification image was collected under permits according to relevant national guidelines, regulation and legislation.Peer reviewedPublisher PD

Built Shallow to Maintain Homeostasis and Persistent Infection: Insight into the Transcriptional Regulatory Network of the Gastric Human Pathogen Helicobacter pylori

Transcriptional regulatory networks (TRNs) transduce environmental signals into coordinated output expression of the genome. Accordingly, they are central for the adaptation of bacteria to their living environments and in host–pathogen interactions. Few attempts have been made to describe a TRN for a human pathogen, because even in model organisms, such as Escherichia coli, the analysis is hindered by the large number of transcription factors involved. In light of the paucity of regulators, the gastric human pathogen Helicobacter pylori represents a very appealing system for understanding how bacterial TRNs are wired up to support infection in the host. Herein, we review and analyze the available molecular and “-omic” data in a coherent ensemble, including protein–DNA and protein–protein interactions relevant for transcriptional control of pathogenic responses. The analysis covers ∼80% of the annotated H. pylori regulators, and provides to our knowledge the first in-depth description of a TRN for an important pathogen. The emerging picture indicates a shallow TRN, made of four main modules (origons) that process the physiological responses needed to colonize the gastric niche. Specific network motifs confer distinct transcriptional response dynamics to the TRN, while long regulatory cascades are absent. Rather than having a plethora of specialized regulators, the TRN of H. pylori appears to transduce separate environmental inputs by using different combinations of a small set of regulators

Visceral Leishmaniasis IgG1 Rapid Monitoring of Cure vs. Relapse, and Potential for Diagnosis of Post Kala-Azar Dermal Leishmaniasis.

Background: There is a recognized need for an improved diagnostic test to assess post-chemotherapeutic treatment outcome in visceral leishmaniasis (VL) and to diagnose post kala-azar dermal leishmaniasis (PKDL). We previously demonstrated by ELISA and a prototype novel rapid diagnostic test (RDT), that high anti-Leishmania IgG1 is associated with post-treatment relapse versus cure in VL. Methodology: Here, we further evaluate this novel, low-cost RDT, named VL Sero K-SeT, and ELISA for monitoring IgG1 levels in VL patients after treatment. IgG1 levels against L. donovani lysate were determined. We applied these assays to Indian sera from cured VL at 6 months post treatment as well as to relapse and PKDL patients. Sudanese sera from pre- and post-treatment and relapse were also tested. Results: Of 104 paired Indian sera taken before and after treatment for VL, when deemed clinically cured, 81 (77.9%) were positive by VL Sero K-SeT before treatment; by 6 months, 68 of these 81 (84.0%) had a negative or reduced RDT test line intensity. ELISAs differed in positivity rate between pre- and post-treatment (p = 0.0162). Twenty eight of 33 (84.8%) Indian samples taken at diagnosis of relapse were RDT positive. A comparison of Indian VL Sero K-SeT data from patients deemed cured and relapsed confirmed that there was a significant difference (p < 0.0001) in positivity rate for the two groups using this RDT. Ten of 17 (58.8%) Sudanese sera went from positive to negative or decreased VL Sero K-SeT at the end of 11-30 days of treatment. Forty nine of 63 (77.8%) PKDL samples from India were positive by VL Sero K-SeT. Conclusion: We have further shown the relevance of IgG1 in determining clinical status in VL patients. A positive VL Sero K-SeT may also be helpful in supporting diagnosis of PKDL. With further refinement, such as the use of specific antigens, the VL Sero K-SeT and/or IgG1 ELISA may be adjuncts to current VL control programmes

C. elegans Agrin Is Expressed in Pharynx, IL1 Neurons and Distal Tip Cells and Does Not Genetically Interact with Genes Involved in Synaptogenesis or Muscle Function

Agrin is a basement membrane protein crucial for development and maintenance of the neuromuscular junction in vertebrates. The C. elegans genome harbors a putative agrin gene agr-1. We have cloned the corresponding cDNA to determine the primary structure of the protein and expressed its recombinant fragments to raise specific antibodies. The domain organization of AGR-1 is very similar to the vertebrate orthologues. C. elegans agrin contains a signal sequence for secretion, seven follistatin domains, three EGF-like repeats and two laminin G domains. AGR-1 loss of function mutants did not exhibit any overt phenotypes and did not acquire resistance to the acetylcholine receptor agonist levamisole. Furthermore, crossing them with various mutants for components of the dystrophin-glycoprotein complex with impaired muscle function did not lead to an aggravation of the phenotypes. Promoter-GFP translational fusion as well as immunostaining of worms revealed expression of agrin in buccal epithelium and the protein deposition in the basal lamina of the pharynx. Furthermore, dorsal and ventral IL1 head neurons and distal tip cells of the gonad arms are sources of agrin production, but no expression was detectable in body muscles or in the motoneurons innervating them. Recombinant worm AGR-1 fragment is able to cluster vertebrate dystroglycan in cultured cells, implying a conservation of this interaction, but since neither of these proteins is expressed in muscle of C. elegans, this interaction may be required in different tissues. The connections between muscle cells and the basement membrane, as well as neuromuscular junctions, are structurally distinct between vertebrates and nematodes

Dissecting the Shared Genetic Architecture of Suicide Attempt, Psychiatric Disorders, and Known Risk Factors

Background Suicide is a leading cause of death worldwide, and nonfatal suicide attempts, which occur far more frequently, are a major source of disability and social and economic burden. Both have substantial genetic etiology, which is partially shared and partially distinct from that of related psychiatric disorders. Methods We conducted a genome-wide association study (GWAS) of 29,782 suicide attempt (SA) cases and 519,961 controls in the International Suicide Genetics Consortium (ISGC). The GWAS of SA was conditioned on psychiatric disorders using GWAS summary statistics via multitrait-based conditional and joint analysis, to remove genetic effects on SA mediated by psychiatric disorders. We investigated the shared and divergent genetic architectures of SA, psychiatric disorders, and other known risk factors. Results Two loci reached genome-wide significance for SA: the major histocompatibility complex and an intergenic locus on chromosome 7, the latter of which remained associated with SA after conditioning on psychiatric disorders and replicated in an independent cohort from the Million Veteran Program. This locus has been implicated in risk-taking behavior, smoking, and insomnia. SA showed strong genetic correlation with psychiatric disorders, particularly major depression, and also with smoking, pain, risk-taking behavior, sleep disturbances, lower educational attainment, reproductive traits, lower socioeconomic status, and poorer general health. After conditioning on psychiatric disorders, the genetic correlations between SA and psychiatric disorders decreased, whereas those with nonpsychiatric traits remained largely unchanged. Conclusions Our results identify a risk locus that contributes more strongly to SA than other phenotypes and suggest a shared underlying biology between SA and known risk factors that is not mediated by psychiatric disorders.Peer reviewe