206 research outputs found
Design and development of a deployable self-inflating adaptive membrane
Space structures nowadays are often designed to serve just one objective during their mission life, examples include truss structures that are used as support structures, solar sails for propulsion or antennas for communication. Each and every single one of these structures is optimized to serve just their distinct purpose and are more or less useless for the rest of the mission and therefore dead weight. By developing a smart structure that can change its shape and therefore adapt to different mission requirements in a single structure, the flexibility of the spacecraft can be increased by greatly decreasing the mass of the entire system. This paper will introduce such an adaptive structure called the Self-inflating Adaptive Membrane (SAM) concept which is being developed at the Advanced Space Concepts Laboratory of the University of Strathclyde. An idea presented in this paper is to adapt these basic changeable elements from nature’s heliotropism. Heliotropism describes a movement of a plant towards the sun during a day; the movement is initiated by turgor pressure change between adjacent cells. The shape change of the global structure can be significant by adding up these local changes induced by local elements, for example the cell’s length. To imitate the turgor pressure change between the motor cells in plants to space structures, piezoelectric micro pumps are added between two neighboring cells. A passive inflation technique is used for deploying the membrane at its destination in space. The trapped air in the spheres will inflate the spheres when subjected to vacuum, therefore no pump or secondary active deployment methods are needed. The paper will present the idea behind the adaption of nature’s heliotropism principle to space structures. The feasibility of the residual air inflation method is verified by LS-DYNA simulations and prototype bench tests under vacuum conditions. Additionally, manufacturing techniques and folding patterns are presented to optimize the actual bench test structure and to minimize the required storage volume. It is shown that through a bio-inspired concept, a high ratio of adaptability of the membrane can be obtained. The paper concludes with the design of a technology demonstrator for a sounding rocket experiment to be launched in March 2013 from the Swedish launch side Esrange
A human septin octamer complex sensitive to membrane curvature drives membrane deformation with a specific mesh-like organization
Septins are cytoskeletal proteins interacting with the inner plasma membrane and other cytoskeletal partners. Being key in membrane remodeling processes, they often localize at specific micrometric curvatures. To analyze the behavior of human septins at the membrane and decouple their role from other partners, we used a combination of bottom-up in vitro methods. We assayed their ultrastructural organization, their curvature sensitivity, as well as their role in membrane reshaping. On membranes, human septins organize into a two-layered mesh of orthogonal filaments, instead of generating parallel sheets of filaments observed for budding yeast septins. This peculiar mesh organization is sensitive to micrometric curvature and drives membrane reshaping as well. The observed membrane deformations together with the filamentous organization are recapitulated in a coarse-grained computed simulation to understand their mechanisms. Our results highlight the specific organization and behavior of animal septins at the membrane as opposed to those of fungal proteins
Physodes and the phenolic compounds of brown algae. Composition and significance of physodes in vivo
Online teacher development: collaborating in a virtual learning environment
Over recent years educational institutions have been making increasing use of virtual environments to set up collaborative activities for learners. While it is recognized that teachers play an important role in facilitating learner collaboration online they may not have the necessary skills to do so successfully. Thus, a small scale professional development programme was set up and piloted by two distance universities. The aims were to develop teachers’ experience of online group work; to trial a set of pilot activities which would raise awareness of factors contributing to successful collaborative online activity; and to identify professional development needs in this area. This article reports on the hands-on experience of a group of 20 teachers, examines some of the competences that are needed to successfully collaborate in virtual environments, and presents the skills that teachers need to foster online collaborative learning in the virtual classroom. Quantitative and qualitative data were collected, examining the levels of participation among participants, the collaborative activity of two groups, and teacher perception of the collaboration which took place. The skills identified include planning and managing the collaboration, designing appropriate activities, giving clear instructions and getting students to negotiate ground rules for participation, moderating at the right level, and choosing the right environment and the appropriate tool(s). While this study was carried out with language teachers, many of the findings are applicable to other subject areas where growing emphasis is placed on the development of collaborative skills
Analysis of the P. lividus sea urchin genome highlights contrasting trends of genomic and regulatory evolution in deuterostomes
Sea urchins are emblematic models in developmental biology and display several characteristics that set them apart from other deuterostomes. To uncover the genomic cues that may underlie these specificities, we generated a chromosome-scale genome assembly for the sea urchin Paracentrotus lividus and an extensive gene expression and epigenetic profiles of its embryonic development. We found that, unlike vertebrates, sea urchins retained ancestral chromosomal linkages but underwent very fast intrachromosomal gene order mixing. We identified a burst of gene duplication in the echinoid lineage and showed that some of these expanded genes have been recruited in novel structures (water vascular system, Aristotle's lantern, and skeletogenic micromere lineage). Finally, we identified gene-regulatory modules conserved between sea urchins and chordates. Our results suggest that gene-regulatory networks controlling development can be conserved despite extensive gene order rearrangement
A Tale of Two Oxidation States: Bacterial Colonization of Arsenic-Rich Environments
Microbial biotransformations have a major impact on contamination by toxic elements, which threatens public health in developing and industrial countries. Finding a means of preserving natural environments—including ground and surface waters—from arsenic constitutes a major challenge facing modern society. Although this metalloid is ubiquitous on Earth, thus far no bacterium thriving in arsenic-contaminated environments has been fully characterized. In-depth exploration of the genome of the β-proteobacterium Herminiimonas arsenicoxydans with regard to physiology, genetics, and proteomics, revealed that it possesses heretofore unsuspected mechanisms for coping with arsenic. Aside from multiple biochemical processes such as arsenic oxidation, reduction, and efflux, H. arsenicoxydans also exhibits positive chemotaxis and motility towards arsenic and metalloid scavenging by exopolysaccharides. These observations demonstrate the existence of a novel strategy to efficiently colonize arsenic-rich environments, which extends beyond oxidoreduction reactions. Such a microbial mechanism of detoxification, which is possibly exploitable for bioremediation applications of contaminated sites, may have played a crucial role in the occupation of ancient ecological niches on earth
An All-Atom Model of the Chromatin Fiber Containing Linker Histones Reveals a Versatile Structure Tuned by the Nucleosomal Repeat Length
In the nucleus of eukaryotic cells, histone proteins organize the linear genome into a functional and hierarchical architecture. In this paper, we use the crystal structures of the nucleosome core particle, B-DNA and the globular domain of H5 linker histone to build the first all-atom model of compact chromatin fibers. In this 3D jigsaw puzzle, DNA bending is achieved by solving an inverse kinematics problem. Our model is based on recent electron microscopy measurements of reconstituted fiber dimensions. Strikingly, we find that the chromatin fiber containing linker histones is a polymorphic structure. We show that different fiber conformations are obtained by tuning the linker histone orientation at the nucleosomes entry/exit according to the nucleosomal repeat length. We propose that the observed in vivo quantization of nucleosomal repeat length could reflect nature's ability to use the DNA molecule's helical geometry in order to give chromatin versatile topological and mechanical properties
Structural plasticity of single chromatin fibers revealed by torsional manipulation
Magnetic tweezers are used to study the mechanical response under torsion of
single nucleosome arrays reconstituted on tandem repeats of 5S positioning
sequences. Regular arrays are extremely resilient and can reversibly
accommodate a large amount of supercoiling without much change in length. This
behavior is quantitatively described by a molecular model of the chromatin 3-D
architecture. In this model, we assume the existence of a dynamic equilibrium
between three conformations of the nucleosome, which are determined by the
crossing status of the entry/exit DNAs (positive, null or negative). Torsional
strain, in displacing that equilibrium, extensively reorganizes the fiber
architecture. The model explains a number of long-standing topological
questions regarding DNA in chromatin, and may provide the ground to better
understand the dynamic binding of most chromatin-associated proteins.Comment: 18 pages, 7 figures, Supplementary information available at
http://www.nature.com/nsmb/journal/v13/n5/suppinfo/nsmb1087_S1.htm
Structural Organization of DNA in Chlorella Viruses
Chlorella viruses have icosahedral capsids with an internal membrane enclosing their large dsDNA genomes and associated proteins. Their genomes are packaged in the particles with a predicted DNA density of ca. 0.2 bp nm−3. Occasionally infection of an algal cell by an individual particle fails and the viral DNA is dynamically ejected from the capsid. This shows that the release of the DNA generates a force, which can aid in the transfer of the genome into the host in a successful infection. Imaging of ejected viral DNA indicates that it is intimately associated with proteins in a periodic fashion. The bulk of the protein particles detected by atomic force microscopy have a size of ∼60 kDa and two proteins (A278L and A282L) of about this size are among 6 basic putative DNA binding proteins found in a proteomic analysis of DNA binding proteins packaged in the virion. A combination of fluorescence images of ejected DNA and a bioinformatics analysis of the DNA reveal periodic patterns in the viral DNA. The periodic distribution of GC rich regions in the genome provides potential binding sites for basic proteins. This DNA/protein aggregation could be responsible for the periodic concentration of fluorescently labeled DNA observed in ejected viral DNA. Collectively the data indicate that the large chlorella viruses have a DNA packaging strategy that differs from bacteriophages; it involves proteins and share similarities to that of chromatin structure in eukaryotes
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