eXtended Color Cell Compression -- A Runtime-efficient Compression Scheme for Software Video

Multimedia applications require a compression and decompression scheme for digital video. The standardized and widely used techniques JPEG and MPEG provide very good compression ratios, but are computationally quite complex and demanding. We propose to use an extension to the much simpler Color Cell Compression scheme as an alternative. Our extension includes the use of variable block sizes, the reuse of color index values from previously encoded blocks, and Huffman encoding of the stream of blocks. We present experimental results showing that our scheme provides much better runtime performance than MPEG, at the cost of a slightly inferior compression ratio. It is thus especially suited for software videos in high-speed networks

Metanephric adenoma of the kidney: an unusual diagnostic challenge

Although metanephric adenoma (MA) is a rare, benign neoplasm of epithelial cells, it is often difficult to distinguish this entity from other malignant neoplasms preoperatively. We report a case of a large renal mass for which preoperative diagnosis was indeterminate, with the differential diagnosis including Wilm’s tumor, MA, and papillary renal cell carcinoma (PRCC). Accurate postoperative differentiation of MA from PRCC is critical because adjuvant therapy is considered after surgical resection of PRCC tumors

Tumor Microvessel Density as a Prognostic Marker in High-Risk Renal Cell Carcinoma Patients Treated on ECOG-ACRIN E2805

Purpose—Increased vascularity is a hallmark of renal cell carcinoma (RCC). Microvessel density (MVD) is one measurement of tumor angiogenesis; however, its utility as a biomarker of outcome is unknown. ECOG-ACRIN 2805 (E2805) enrolled 1,943 resected high-risk RCC patients randomized to adjuvant sunitinib, sorafenib, or placebo. We aimed to determine the prognostic and predictive role of MVD in RCC. Experimental Design—We obtained pretreatment primary RCC nephrectomy tissues from 822 patients on E2805 and constructed tissue microarrays. Using quantitative immunofluorescence, we measured tumor MVD as the area of CD34-expressing cells. We determined the association with disease-free survival (DFS), overall survival (OS), treatment arm, and clinicopathologic variables. Results—High MVD (above the median) was associated with prolonged OS for the entire cohort (p = 0.021) and for patients treated with placebo (p = 0.028). The association between high MVD and OS was weaker in patients treated with sunitinib or sorafenib (p = 0.060). MVD was not associated with DFS (p = 1.00). On multivariable analysis, MVD remained independently associated with improved OS (p = 0.013). High MVD correlated with Fuhrman grade 1–2 (p \u3c 0.001), clear cell histology (p \u3c 0.001), and absence of necrosis (p \u3c 0.001) but not with gender, age, sarcomatoid features, lymphovascular invasion, or tumor size. Conclusions—High MVD in resected high-risk RCC patients is an independent prognostic, rather than predictive, biomarker of improved OS. Further studies should assess whether incorporating MVD into clinical models will enhance our ability to predict outcome and if low MVD can be used for selection of high-risk patients for adjuvant therapy trials

Conditional BDNF delivery from astrocytes rescues memory deficits, spine density and synaptic properties in the 5xFAD mouse model of Alzheimer disease

It has been well documented that neurotrophins, including brain-derived neurotrophic factor (BDNF), are severely affected in Alzheimer's disease (AD), but their administration faces a myriad of technical challenges. Here we took advantage of the early astrogliosis observed in an amyloid mouse model of AD (5xFAD) and used it as an internal sensor to administer BDNF conditionally and locally. We first demonstrate the relevance of BDNF release from astrocytes by evaluating the effects of coculturing WT neurons and BDNF-deficient astrocytes. Next, we crossed 5xFAD mice with pGFAP:BDNF mice (only males were used) to create 5xFAD mice that overexpress BDNF when and where astrogliosis is initiated (5xF:pGB mice). We evaluated the behavioral phenotype of these mice. We first found that BDNF from astrocytes is crucial for dendrite outgrowth and spine number in cultured WT neurons. Double-mutant 5xF:pGB mice displayed improvements in cognitive tasks compared with 5xFAD littermates. In these mice, there was a rescue of BDNF/TrkB downstream signaling activity associated with an improvement of dendritic spine density and morphology. Clusters of synaptic markers, PSD-95 and synaptophysin, were also recovered in 5xF:pGB compared with 5xFAD mice as well as the number of presynaptic vesicles at excitatory synapses. Additionally, experimentally evoked LTP in vivo was increased in 5xF:pGB mice. The beneficial effects of conditional BDNF production and local delivery at the location of active neuropathology highlight the potential to use endogenous biomarkers with early onset, such as astrogliosis, as regulators of neurotrophic therapy in AD.SIGNIFICANCE STATEMENT Recent evidence places astrocytes as pivotal players during synaptic plasticity and memory processes. In the present work, we first provide evidence that astrocytes are essential for neuronal morphology via BDNF release. We then crossed transgenic mice (5xFAD mice) with the transgenic pGFAP-BDNF mice, which express BDNF under the GFAP promoter. The resultant double-mutant mice 5xF:pGB mice displayed a full rescue of hippocampal BDNF loss and related signaling compared with 5xFAD mice and a significant and specific improvement in all the evaluated cognitive tasks. These improvements did not correlate with amelioration of β amyloid load or hippocampal adult neurogenesis rate but were accompanied by a dramatic recovery of structural and functional synaptic plasticity

Investigating decision rules with a new experimental design: the EXACT paradigm.

In the decision-making field, it is important to distinguish between the perceptual process (how information is collected) and the decision rule (the strategy governing decision-making). We propose a new paradigm, called EXogenous ACcumulation Task (EXACT) to disentangle these two components. The paradigm consists of showing a horizontal gauge that represents the probability of receiving a reward at time t and increases with time. The participant is asked to press a button when they want to request a reward. Thus, the perceptual mechanism is hard-coded and does not need to be inferred from the data. Based on this paradigm, we compared four decision rules (Bayes Risk, Reward Rate, Reward/Accuracy, and Modified Reward Rate) and found that participants appeared to behave according to the Modified Reward Rate. We propose a new way of analysing the data by using the accuracy of responses, which can only be inferred in classic RT tasks. Our analysis suggests that several experimental findings such as RT distribution and its relationship with experimental conditions, usually deemed to be the result of a rise-to-threshold process, may be simply explained by the effect of the decision rule employed

Prognostic role of clusterin in resected adenocarcinomas of the lung

Rationale Clusterin expression may change in various human malignancies, including lung cancer. Patients with resectable non-small cell lung cancer (NSCLC), including adenocarcinoma, have a poor prognosis, with a relapse rate of 30\u201350% within 5 years. Nuclear factor kB (Nf-kB) is an intracellular protein involved in the initiation and progression of several human cancers, including the lung. Objectives We investigate the role of clusterin and Nf-kB expression in predicting the prognosis of patients with early-stage surgically resected adenocarcinoma of the lung. Findings The level of clusterin gradually decreased from well-differentiated to poorly differentiated adenocarcinomas. Clusterin expression was significantly higher in patients with low-grade adenocarcinoma, in early-stage disease and in women. Clusterin expression was inversely related to relapse and survival in both univariate and multivariate analyses. Finally, we observed an inverse correlation between Nf-kB and clusterin. Conclusions Clusterin expression represents an independent prognostic factor in surgically resected lung adenocarcinoma and was proven to be a useful biomarker for fewer relapses and longer survival in patients in the early stage of disease. The inverse correlation between Nf-kB and clusterin expression confirm the previously reported role of clusterin as potent down regulator of Nf-kB

Face or building superiority in peripheral vision reversed by task requirements

Peripheral vision has been the topic of few studies compared with central vision. Nevertheless, given that visual information covers all the visual field and that relevant information can originate from highly eccentric positions, the understanding of peripheral vision abilities for object perception seems essential. The poorer resolution of peripheral vision would first suggest that objects requiring large-scale feature integration such as buildings would be better processed than objects requiring finer analysis such as faces. Nevertheless, task requirements also determine the information (coarse or fine) necessary for a given object to be processed. We therefore investigated how task and eccentricity modulate object processing in peripheral vision. Three experiments were carried out requiring finer or coarser information processing of faces and buildings presented in central and peripheral vision. Our results showed that buildings were better judged as identical or familiar in periphery whilst faces were better categorised. We conclude that this superiority for a given stimulus in peripheral vision results (a) from the available information, which depends on the decrease of resolution with eccentricity, and (b) from the useful information, which depends on both the task and the semantic category

A theory of power laws in human reaction times: insights from an information-processing approach

Human reaction time (RT) can be defined as the time elapsed from stimulus presentation until a reaction/response occurs (e.g., manual, verbal, saccadic, etc.). RT has been a fundamental measure of the sensory-motor latency at suprathreshold conditions for more than a century and is one of the hallmarks of human performance in everyday tasks (Luce, 1986; Meyer et al., 1988). Some examples are the measurement of RTs in sports science, driving safety or in aging. Under repeated experimental conditions the RT is not a constant value but fluctuates irregularly over time. Stochastic fluctuations of RTs are considered a benchmark for modeling neural latency mechanisms at a macroscopic scale (Luce, 1986; Smith and Ratcliff, 2004). Power-law behavior has been reported in at least three major types of experiments

Innovating together for just and green urban transitions: Stories from Urban ReLeaf Cities

Nature-based solutions in urban environments can provide cooling effects, decrease air pollution, and improve mental health, amongst others important ecosystem services and health-related benefits. Ambitious plans, such as the pledge to plant 3 billion trees in the EU, the European Green Deal, or the Green City Accord support this direction. Their implementation, however, requires transformative changes on the ground to overcome business as usual approaches. The Urban ReLeaf project delivers change by bringing public authorities and citizen groups together to shape green infrastructure actions in their cities. Six pilot cities co-create citizen-centric innovations for the democratisation of urban greenspace monitoring and the wider policy making process in pursuit of urban climate resilience. This poster showcases the stories of the six cities and their approaches to participatory, and data-driven decision making. Athens is undergoing a greening transformation with a new, citizen-powered tree registry providing critical data for better management of greenspaces. Cascais engages citizens in sharing perceptions and thermal comfort levels while using greenspaces to validate the effectiveness of its parks. Meanwhile in Dundee, a city facing increasing grey infrastructure in deprived areas, actions to enhance the accessibility of greenspaces are co-developed with citizens and stakeholders. Mannheim has a heat action plan to safeguard its most vulnerable residents but has identified critical data gaps. Citizen observations of trees and thermal comfort, when integrated with official data streams, will aid the delivery of climate adaptation measures. Riga engages diverse audiences to address concerns about air pollution and greenspace usage, to ensure better informed policies. Finally, in Utrecht, data on temperature, humidity and heat stress, collected by and for citizens, will help them reduce the urban heat island effect and shape effective mitigation strategies

A Novel Gene Signature for Molecular Diagnosis of Human Prostate Cancer by RT-qPCR

Prostate cancer (CaP) is one of the most relevant causes of cancer death in Western Countries. Although detection of CaP at early curable stage is highly desirable, actual screening methods present limitations and new molecular approaches are needed. Gene expression analysis increases our knowledge about the biology of CaP and may render novel molecular tools, but the identification of accurate biomarkers for reliable molecular diagnosis is a real challenge. We describe here the diagnostic power of a novel 8-genes signature: ornithine decarboxylase (ODC), ornithine decarboxylase antizyme (OAZ), adenosylmethionine decarboxylase (AdoMetDC), spermidine/spermine N(1)-acetyltransferase (SSAT), histone H3 (H3), growth arrest specific gene (GAS1), glyceraldehyde 3-phosphate dehydrogenase (GAPDH) and Clusterin (CLU) in tumour detection/classification of human CaP. METHODOLOGY/PRINCIPAL FINDINGS: The 8-gene signature was detected by retrotranscription real-time quantitative PCR (RT-qPCR) in frozen prostate surgical specimens obtained from 41 patients diagnosed with CaP and recommended to undergo radical prostatectomy (RP). No therapy was given to patients at any time before RP. The bio-bank used for the study consisted of 66 specimens: 44 were benign-CaP paired from the same patient. Thirty-five were classified as benign and 31 as CaP after final pathological examination. Only molecular data were used for classification of specimens. The Nearest Neighbour (NN) classifier was used in order to discriminate CaP from benign tissue. Validation of final results was obtained with 10-fold cross-validation procedure. CaP versus benign specimens were discriminated with (80+/-5)% accuracy, (81+/-6)% sensitivity and (78+/-7)% specificity. The method also correctly classified 71% of patients with Gleason score<7 versus > or =7, an important predictor of final outcome. CONCLUSIONS/SIGNIFICANCE: The method showed high sensitivity in a collection of specimens in which a significant portion of the total (13/31, equal to 42%) was considered CaP on the basis of having less than 15% of cancer cells. This result supports the notion of the "cancer field effect", in which transformed cells extend beyond morphologically evident tumour. The molecular diagnosis method here described is objective and less subjected to human error. Although further confirmations are needed, this method poses the potential to enhance conventional diagnosis