Gridded and direct Epoch of Reionisation bispectrum estimates using the Murchison Widefield Array

We apply two methods to estimate the 21~cm bispectrum from data taken within the Epoch of Reionisation (EoR) project of the Murchison Widefield Array (MWA). Using data acquired with the Phase II compact array allows a direct bispectrum estimate to be undertaken on the multiple redundantly-spaced triangles of antenna tiles, as well as an estimate based on data gridded to the $uv$-plane. The direct and gridded bispectrum estimators are applied to 21 hours of high-band (167--197~MHz; $z$=6.2--7.5) data from the 2016 and 2017 observing seasons. Analytic predictions for the bispectrum bias and variance for point source foregrounds are derived. We compare the output of these approaches, the foreground contribution to the signal, and future prospects for measuring the bispectra with redundant and non-redundant arrays. We find that some triangle configurations yield bispectrum estimates that are consistent with the expected noise level after 10 hours, while equilateral configurations are strongly foreground-dominated. Careful choice of triangle configurations may be made to reduce foreground bias that hinders power spectrum estimators, and the 21~cm bispectrum may be accessible in less time than the 21~cm power spectrum for some wave modes, with detections in hundreds of hours.Comment: 19 pages, 10 figures, accepted for publication in PAS

Low frequency observations of linearly polarized structures in the interstellar medium near the south Galactic pole

This is an author-created, un-copyedited version of an article published in The Astrophysical Journal. IOP Publishing Ltd is not responsible for any errors or omissions in this version of the manuscript or any version derived from it. The Version of Record is available online at https://doi.org/10.3847/0004-637X/830/1/38We present deep polarimetric observations at 154 MHz with the Murchison Widefield Array (MWA), covering 625 deg^2 centered on RA=0 h, Dec=-27 deg. The sensitivity available in our deep observations allows an in-band, frequency-dependent analysis of polarized structure for the first time at long wavelengths. Our analysis suggests that the polarized structures are dominated by intrinsic emission but may also have a foreground Faraday screen component. At these wavelengths, the compactness of the MWA baseline distribution provides excellent snapshot sensitivity to large-scale structure. The observations are sensitive to diffuse polarized emission at ~54' resolution with a sensitivity of 5.9 mJy beam^-1 and compact polarized sources at ~2.4' resolution with a sensitivity of 2.3 mJy beam^-1 for a subset (400 deg^2) of this field. The sensitivity allows the effect of ionospheric Faraday rotation to be spatially and temporally measured directly from the diffuse polarized background. Our observations reveal large-scale structures (~1 deg - 8 deg in extent) in linear polarization clearly detectable in ~2 minute snapshots, which would remain undetectable by interferometers with minimum baseline lengths >110 m at 154 MHz. The brightness temperature of these structures is on average 4 K in polarized intensity, peaking at 11 K. Rotation measure synthesis reveals that the structures have Faraday depths ranging from -2 rad m^-2 to 10 rad m^-2 with a large fraction peaking at ~+1 rad m^-2. We estimate a distance of 51+/-20 pc to the polarized emission based on measurements of the in-field pulsar J2330-2005. We detect four extragalactic linearly polarized point sources within the field in our compact source survey. Based on the known polarized source population at 1.4 GHz and non-detections at 154 MHz, we estimate an upper limit on the depolarization ratio of 0.08 from 1.4 GHz to 154 MHz.Peer reviewedFinal Accepted Versio

A high resolution foreground model for the MWA EoR1 field : model and implications for EoR power spectrum analysis

This article has been published in a revised form in Publications of the Astronomical Society of Australia https://doi.org/10.1017/pasa.2017.26 This version is free to view and download for private research and study only. Not for re-distribution, re-sale or use in derivative works. Under embargo. Embargo end date: 10 February 2018. © Astronomical Society of Australia 2017.The current generation of experiments aiming to detect the neutral hydrogen signal from the Epoch of Reionisation (EoR) is likely to be limited by systematic effects associated with removing foreground sources from target fields. In this paper we develop a model for the compact foreground sources in one of the target fields of the MWA's EoR key science experiment: the `EoR1' field. The model is based on both the MWA's GLEAM survey and GMRT 150 MHz data from the TGSS survey, the latter providing higher angular resolution and better astrometric accuracy for compact sources than is available from the MWA alone. The model contains 5049 sources, some of which have complicated morphology in MWA data, Fornax A being the most complex. The higher resolution data show that 13% of sources that appear point-like to the MWA have complicated morphology such as double and quad structure, with a typical separation of 33~arcsec. We derive an analytic expression for the error introduced into the EoR two-dimensional power spectrum due to peeling close double sources as single point sources and show that for the measured source properties, the error in the power spectrum is confined to high $k_\bot$ modes that do not affect the overall result for the large-scale cosmological signal of interest. The brightest ten mis-modelled sources in the field contribute 90% of the power bias in the data, suggesting that it is most critical to improve the models of the brightest sources. With this hybrid model we reprocess data from the EoR1 field and show a maximum of 8% improved calibration accuracy and a factor of two reduction in residual power in $k$-space from peeling these sources. Implications for future EoR experiments including the SKA are discussed in relation to the improvements obtained.Peer reviewedFinal Accepted Versio

Extragalactic Peaked-Spectrum Radio Sources at Low Frequencies

This document is the Accepted Manuscript of the following article: J.R. Callingham, et al, 'Extragalactic Peaked-Spectrum Radio Sources at Low Frequencies', The Astrophysical Journal, 836 (2), (28pp), first published online 17 February 2017. DOI: https://doi.org/10.3847/1538-4357-836/2/174. © 2017, The American Astronomical Society. All rights reserved. Data tables, and the appendix containing all of the SEDs, are available from the journal and on request to the authorWe present a sample of 1,483 sources that display spectral peaks between 72 MHz and 1.4 GHz, selected from the GaLactic and Extragalactic All-sky Murchison Widefield Array (GLEAM) survey. The GLEAM survey is the widest fractional bandwidth all-sky survey to date, ideal for identifying peaked-spectrum sources at low radio frequencies. Our peaked-spectrum sources are the low frequency analogues of gigahertz-peaked spectrum (GPS) and compact-steep spectrum (CSS) sources, which have been hypothesized to be the precursors to massive radio galaxies. Our sample more than doubles the number of known peaked-spectrum candidates, and 95% of our sample have a newly characterized spectral peak. We highlight that some GPS sources peaking above 5 GHz have had multiple epochs of nuclear activity, and demonstrate the possibility of identifying high redshift ($z > 2$) galaxies via steep optically thin spectral indices and low observed peak frequencies. The distribution of the optically thick spectral indices of our sample is consistent with past GPS/CSS samples but with a large dispersion, suggesting that the spectral peak is a product of an inhomogeneous environment that is individualistic. We find no dependence of observed peak frequency with redshift, consistent with the peaked-spectrum sample comprising both local CSS sources and high-redshift GPS sources. The 5 GHz luminosity distribution lacks the brightest GPS and CSS sources of previous samples, implying that a convolution of source evolution and redshift influences the type of peaked-spectrum sources identified below 1 GHz. Finally, we discuss sources with optically thick spectral indices that exceed the synchrotron self-absorption limit.Peer reviewedFinal Accepted Versio

The low-frequency environment of the Murchison Widefield Array : radio-frequency interference analysis and mitigation

This is the Accepted Manuscript version of the following article: A. R. Offringa, et al., “The low-frequency environment of the Murchison Widefield Array: radio-frequency interference analysis and mitigation”, Publications of the Astronomical Society of Australia, Vol. 32, March 2015. The final published version is available at: https://doi.org/10.1017/pasa.2015.7 © Astronomical Society of Australia 2015The Murchison Widefield Array (MWA) is a new low-frequency interferometric radio telescope built in Western Australia at one of the locations of the future Square Kilometre Array (SKA). We describe the automated radio-frequency interference (RFI) detection strategy implemented for the MWA, which is based on the AOFlagger platform, and present 72-231-MHz RFI statistics from 10 observing nights. RFI detection removes 1.1% of the data. RFI from digital TV (DTV) is observed 3% of the time due to occasional ionospheric or atmospheric propagation. After RFI detection and excision, almost all data can be calibrated and imaged without further RFI mitigation efforts, including observations within the FM and DTV bands. The results are compared to a previously published Low-Frequency Array (LOFAR) RFI survey. The remote location of the MWA results in a substantially cleaner RFI environment compared to LOFAR's radio environment, but adequate detection of RFI is still required before data can be analysed. We include specific recommendations designed to make the SKA more robust to RFI, including: the availability of sufficient computing power for RFI detection; accounting for RFI in the receiver design; a smooth band-pass response; and the capability of RFI detection at high time and frequency resolution (second and kHz-scale respectively).Peer reviewedFinal Accepted Versio

Modelling and peeling extended sources with shapelets: a Fornax A case study

To make a power spectrum (PS) detection of the 21 cm signal from the Epoch of Reionisation (EoR), one must avoid/subtract bright foreground sources. Sources such as Fornax A present a modelling challenge due to spatial structures spanning from arc seconds up to a degree. We compare modelling with multi-scale (MS) CLEAN components to 'shapelets', an alternative set of basis functions. We introduce a new image-based shapelet modelling package, SHAMFI. We also introduce a new CUDA simulation code (WODEN) to generate point source, Gaussian, and shapelet components into visibilities. We test performance by modelling a simulation of Fornax A, peeling the model from simulated visibilities, and producing a residual PS. We find the shapelet method consistently subtracts large-angular-scale emission well, even when the angular-resolution of the data is changed. We find that when increasing the angular-resolution of the data, the MS CLEAN model worsens at large angular-scales. When testing on real MWA data, the expected improvement is not seen in real data because of the other dominating systematics still present. Through further simulation we find the expected differences to be lower than obtainable through current processing pipelines. We conclude shapelets are worthwhile for subtracting extended galaxies, and may prove essential for an EoR detection in the future, once other systematics have been addressed.Comment: 17 pages, 11 Figures, accepted for publication in Publications of the Astronomical Society of Australia (18/05/2020). "For the SHAMFI code, see: https://github.com/JLBLine/SHAMFI" . "For the SHAMFI documentation, see: https://shamfi.readthedocs.io/" . "For the WODEN code and documentation see: https://github.com/JLBLine/WODEN

Spectral energy distribution and radio halo of NGC253 at low radio frequencies

A. D. Kapinska, 'Spectral Energy Distribution and Radio Halo of NGC 253 at Low Radio Frequencies', The Astrophysical Journal, Vol. 838(68), 15 pp, March 2017. The version of record is available online at doi: https://doi.org/10.3847/1538-4357/aa5f5d. © 2017. The American Astronomical Society. All rights reserved.We present new radio continuum observations of NGC253 from the Murchison Widefield Array at frequencies between 76 and 227 MHz. We model the broadband radio spectral energy distribution for the total flux density of NGC253 between 76 MHz and 11 GHz. The spectrum is best described as a sum of central starburst and extended emission. The central component, corresponding to the inner 500pc of the starburst region of the galaxy, is best modelled as an internally free-free absorbed synchrotron plasma, with a turnover frequency around 230 MHz. The extended emission component of the NGC253 spectrum is best described as a synchrotron emission flattening at low radio frequencies. We find that 34% of the extended emission (outside the central starburst region) at 1 GHz becomes partially absorbed at low radio frequencies. Most of this flattening occurs in the western region of the SE halo, and may be indicative of synchrotron self-absorption of shock re-accelerated electrons or an intrinsic low-energy cut off of the electron distribution. Furthermore, we detect the large-scale synchrotron radio halo of NGC253 in our radio images. At 154 - 231 MHz the halo displays the well known X-shaped/horn-like structure, and extends out to ~8kpc in z-direction (from major axis).Peer reviewedFinal Published versio

Functional mechanisms underlying pleiotropic risk alleles at the 19p13.1 breast-ovarian cancer susceptibility locus

A locus at 19p13 is associated with breast cancer (BC) and ovarian cancer (OC) risk. Here we analyse 438 SNPs in this region in 46,451 BC and 15,438 OC cases, 15,252 BRCA1 mutation carriers and 73,444 controls and identify 13 candidate causal SNPs associated with serous OC (P=9.2 × 10-20), ER-negative BC (P=1.1 × 10-13), BRCA1-associated BC (P=7.7 × 10-16) and triple negative BC (P-diff=2 × 10-5). Genotype-gene expression associations are identified for candidate target genes ANKLE1 (P=2 × 10-3) and ABHD8 (P<2 × 10-3). Chromosome conformation capture identifies interactions between four candidate SNPs and ABHD8, and luciferase assays indicate six risk alleles increased transactivation of the ADHD8 promoter. Targeted deletion of a region containing risk SNP rs56069439 in a putative enhancer induces ANKLE1 downregulation; and mRNA stability assays indicate functional effects for an ANKLE1 3′-UTR SNP. Altogether, these data suggest that multiple SNPs at 19p13 regulate ABHD8 and perhaps ANKLE1 expression, and indicate common mechanisms underlying breast and ovarian cancer risk

Police performance measurement: an annotated bibliography

This study provides information to assist those involved in performance measurement in police organisations. The strategies used to identify the literature are described. Thematic sections cover; general overviews; methodological issues; performance management in other industries; national, international and cross-national studies; frameworks (e.g. Compstat; the Balanced Scorecard); criticisms (particularly unintended consequences); crime-specific measures; practitioner guides; performance evaluation of individual staff; police department plans and evaluations; annotated bibliographies in related areas, and; other literature. Our discussion offers two conclusions: the measures best aligned with performance are typically more expensive, while most operational data should only provide contextual information; the philosophy of open governance should be pursued to promote transparency, accountability and communication to improve police performance

Measuring the global 21-cm signal with the MWA-I:improved measurements of the Galactic synchrotron background using lunar occultation

We present early results from a project to measure the sky-averaged (global), redshifted 21 cm signal from the Epoch of Reionization (EoR), using the Murchison Widefield Array (MWA) telescope. Because interferometers are not sensitive to a spatially invariant global average, they cannot be used to detect this signal using standard techniques. However, lunar occultation of the radio sky imprints a spatial structure on the global signal, allowing us to measure the average brightness temperature of the patch of sky immediately surrounding the Moon. In this paper, we present one night of Moon observations with the MWA between 72-230 MHz and verify our techniques to extract the background sky temperature from measurements of the Moon's flux density. We improve upon previous work using the lunar occultation technique by using a more sophisticated model for reflected 'earthshine' and by employing image differencing to remove imaging artefacts. We leave the Moon's (constant) radio brightness temperature as a free parameter in our fit to the data and as a result, measure T-moon = 180 +/- 12 K and a Galactic synchrotron spectral index of -2.64 +/- 0.14, at the position of the Moon. Finally, we evaluate the prospects of the lunar occultation technique for a global EoR detection and map out a way forward for future work with the MWA.</p