Organic matter cycling in the York River estuary, Virginia: An analysis of potential sources and sinks

A study of the organic matter (OM) sources and biogeochemical and physicochemical sinks was undertaken in the York River estuary, Virginia. The reactivity of dissolved organic carbon (DOC) was enhanced from ∼25--68% by the combined effects of exposure to natural sunlight and bacterial decomposition. In contrast, sunlight exposure decreased the bioreactivity of DOC in the higher salinity lower York by a factor of five. The combined effects of photochemical and bacterial processing were found to modify both the bioavailability and metabolic fate of OM (e.g. respiration vs. biomass). Stable isotopic (delta13C, delta15N) and radiocarbon (Delta14C) values of bacterial nucleic acids were used to estimate the sources and ages of OM assimilated by bacteria in the York and Hudson River estuaries. Bacterial production in freshwater regions of the York was fueled by OM of young, terrigenous origin which accounted for 42--89% of OM assimilated. The remainder (11--58%) of OM assimilated was derived from freshwater algae. In the mid-salinity York, bacterial production was supported by phytoplankton-derived OM in the spring and summer (93--100%) and marsh-derived OM in the fall (73--100%). Isotopic values of bacteria in the lower York suggested production was supported by phytoplankton-derived OM (86--100%) in July and November and algal and marine-like OM (50--69%) in October. In contrast to the young (10--20 yr) OM assimilated by bacteria in the York, production in the Hudson River was subsidized by old (∼1200 BP) terrigenous OM. Higher C:N ratios, lower delta13C and delta 15N values and depletions of total lipid and lipid compound classes in high molecular weight dissolved organic matter (HMW DOM (≥3kDa)) relative to particulate organic matter (POM), suggested differences in the reactivity and cycling of these two OM fractions. Within the dissolved pool, polyunsaturated fatty acids (FA) were a strong predictor of DOC decomposition in bioassays. FA and sterol distributions suggest that POM is derived from phytoplankton/zooplankton sources, while HMW DOM has a bacterial and vascular plant signature. Thus, the physical form of OM (particulate vs dissolved) may affect both the distribution and biogeochemical processing of OM such that terrigenous DOM may be exported, while POM is retained within the estuary

Assessing sources and ages of organic matter supporting river and estuarine bacterial production: A multiple-isotope (D14C, d13C, and d15N) approach

We used radiocarbon (D14C) and stable isotopic (d13C, d15N) signatures of bacterial nucleic acids to estimate the sources and ages of organic matter (OM) assimilated by bacteria in the Hudson River and York River estuary. Dualisotope plots of D14C and d13C coupled with a three-source mixing model resolved the major OM sources supporting bacterial biomass production (BBP). However, overlap in the stable isotopic (d13C and d15N) values of potential source end members (i.e., terrestrial, freshwater phytoplankton, and marsh-derived) prohibited unequivocal source assignments for certain samples. In freshwater regions of the York, terrigenous material of relatively recent origin (i.e., decadal in age) accounted for the majority of OM assimilated by bacteria (49–83%). Marsh and freshwater planktonic material made up the other major source of OM, with 5–33% and 6–25% assimilated, respectively. In the mesohaline York, BBP was supported primarily by estuarine phytoplankton–derived OM during spring and summer (53–87%) and by marsh-derived OM during fall (as much as 83%). Isotopic signatures from higher salinity regions of the York suggested that BBP there was fueled predominantly by either estuarine phytoplankton-derived OM (July and November) or by material advected in from the Chesapeake Bay proper (October). In contrast to the York, BBP in the Hudson River estuary was subsidized by a greater portion (up to ;25%) of old (;24,000 yr BP) allochthonous OM, which was presumably derived from soils. These findings collectively suggest that bacterial metabolism and degradation in rivers and estuaries may profoundly alter the mean composition and age of OM during transport within these systems and before its export to the coastal ocean

Anticipating and Adapting to the Future Impacts of Climate Change on the Health, Security and Welfare of Low Elevation Coastal Zone (LECZ) Communities in Southeastern USA

Low elevation coastal zones (LECZ) are extensive throughout the southeastern United States. LECZ communities are threatened by inundation from sea level rise, storm surge, wetland degradation, land subsidence, and hydrological flooding. Communication among scientists, stakeholders, policy makers and minority and poor residents must improve. We must predict processes spanning the ecological, physical, social, and health sciences. Communities need to address linkages of (1) human and socioeconomic vulnerabilities; (2) public health and safety; (3) economic concerns; (4) land loss; (5) wetland threats; and (6) coastal inundation. Essential capabilities must include a network to assemble and distribute data and model code to assess risk and its causes, support adaptive management, and improve the resiliency of communities. Better communication of information and understanding among residents and officials is essential. Here we review recent background literature on these matters and offer recommendations for integrating natural and social sciences. We advocate for a cyber-network of scientists, modelers, engineers, educators, and stakeholders from academia, federal state and local agencies, non-governmental organizations, residents, and the private sector. Our vision is to enhance future resilience of LECZ communities by offering approaches to mitigate hazards to human health, safety and welfare and reduce impacts to coastal residents and industries

Carbon budget of tidal wetlands, estuaries, and shelf waters of eastern North America

Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Global Biogeochemical Cycles 32 (2018): 389-416, doi:10.1002/2017GB005790.Carbon cycling in the coastal zone affects global carbon budgets and is critical for understanding the urgent issues of hypoxia, acidification, and tidal wetland loss. However, there are no regional carbon budgets spanning the three main ecosystems in coastal waters: tidal wetlands, estuaries, and shelf waters. Here we construct such a budget for eastern North America using historical data, empirical models, remote sensing algorithms, and process‐based models. Considering the net fluxes of total carbon at the domain boundaries, 59 ± 12% (± 2 standard errors) of the carbon entering is from rivers and 41 ± 12% is from the atmosphere, while 80 ± 9% of the carbon leaving is exported to the open ocean and 20 ± 9% is buried. Net lateral carbon transfers between the three main ecosystem types are comparable to fluxes at the domain boundaries. Each ecosystem type contributes substantially to exchange with the atmosphere, with CO2 uptake split evenly between tidal wetlands and shelf waters, and estuarine CO2 outgassing offsetting half of the uptake. Similarly, burial is about equal in tidal wetlands and shelf waters, while estuaries play a smaller but still substantial role. The importance of tidal wetlands and estuaries in the overall budget is remarkable given that they, respectively, make up only 2.4 and 8.9% of the study domain area. This study shows that coastal carbon budgets should explicitly include tidal wetlands, estuaries, shelf waters, and the linkages between them; ignoring any of them may produce a biased picture of coastal carbon cycling.NASA Interdisciplinary Science program Grant Number: NNX14AF93G; NASA Carbon Cycle Science Program Grant Number: NNX14AM37G; NASA Ocean Biology and Biogeochemistry Program Grant Number: NNX11AD47G; National Science Foundation's Chemical Oceanography Program Grant Number: OCE‐12605742018-10-0

Molecular transformation and degradation of refractory dissolved organic matter in the Atlantic and Southern Ocean

More than 90% of the global ocean dissolved organic carbon (DOC) is refractory, has an average age of 4,000–6,000 years and a lifespan from months to millennia. The fraction of dissolved organic matter (DOM) that is resistant to degradation is a long-term buffer in the global carbon cycle but its chemical composition, structure, and biochemical formation and degradation mechanisms are still unresolved. We have compiled the most comprehensive molecular data set of 197 Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) analyses from solid-phase extracted marine DOM covering two major oceans, the Atlantic sector of the Southern Ocean and the East Atlantic Ocean (ranging from 50° N to 70° S). Molecular trends and radiocarbon dating of 34 DOM samples (comprising Δ14C values from -229 to -495‰) were combined to model an integrated degradation rate for bulk DOC resulting in a predicted age of >24 ka for the most persistent DOM fraction. First order kinetic degradation rates for 1,557 mass peaks indicate that numerous DOM molecules cycle on timescales much longer than the turnover of the bulk DOC pool (estimated residence times of >100 ka) and the range of validity of radiocarbon dating. Changes in elemental composition were determined by assigning molecular formulae to the detected mass peaks. The combination of residence times with molecular information enabled modelling of the average elemental composition of the slowest degrading fraction of the DOM pool. In our dataset, a group of 361 molecular formulae represented the most stable composition in the oceanic environment (“island of stability”). These most persistent compounds encompass only a narrow range of the elemental ratios H/C (average of 1.17 ± 0.13), and O/C (average of 0.52 ± 0.10) and molecular masses (360 ± 28 and 497 ± 51 Da). In the Weddell Sea DOC concentrations in the surface waters were low (46.3 ± 3.3 μM) while the organic radiocarbon was significantly more depleted than that of the East Atlantic, indicating average surface water DOM ages of 4,920 ± 180 a. These results are in accordance with a highly degraded DOM in the Weddell Sea surface water as also shown by the molecular degradation index IDEG obtained from FT-ICR MS data. Further, we identified 339 molecular formulae which probably contribute to an increased DOC concentration in the Southern Ocean and potentially reflect an accumulation or enhanced sequestration of refractory DOC in the Weddell Sea. These results will contribute to a better understanding of the persistent nature of marine DOM and its role as an oceanic carbon buffer in a changing climate

An isotopic (Δ¹⁴C, δ¹³C, and δ¹⁵N) investigation of the composition of particulate organic matter and zooplankton food sources in Lake Superior and across a size-gradient of aquatic systems

Food webs in aquatic systems can be supported both by carbon from recent local primary productivity and by carbon subsidies, such as material from terrestrial ecosystems, or past in situ primary productivity. The importance of these subsidies to respiration and biomass production remains a topic of debate. While some studies have reported that terrigenous organic carbon supports disproportionately high zooplankton production, others have suggested that phytoplankton preferentially support zooplankton production in aquatic ecosystems. Here we apply natural abundance radiocarbon (Δ14C) and stable isotope (δ13C, δ15N) analyses to show that zooplankton in Lake Superior selectively incorporate recently fixed, locally produced (autochthonous) organic carbon even though other carbon sources are readily available. Estimates from Bayesian isotopic modeling based on Δ14C and δ13C values show that the average lake-wide median contributions of recent in-lake primary production and terrestrial, sedimentary, and bacterial organic carbon to the bulk POM in Lake Superior were 58%, 5%, 33%, and 3%, respectively. However, isotopic modeling estimates also show that recent in situ production contributed a disproportionately large amount (median, 91%) of the carbon in mesozooplankton biomass in Lake Superior. Although terrigenous organic carbon and old organic carbon from resuspended sediments were significant portions (median, 38%) of the available basal food resources, these contributed only a small amount to mesozooplankton biomass. Comparison of zooplankton food sources based on their radiocarbon composition showed that terrigenous organic carbon was relatively more important in rivers and small lakes, and the proportion of terrestrially derived material used by zooplankton correlated with the hydrologic residence time and the ratio of basin area to water surface area

Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) data during the 2013 North Pacific RDOC cruise

These data include the nominal mass, molecular formula, oxygen/carbon (O/C) ratio, hydrogen/carbon (H/C) ratio, and mass peak magnitudes for each sample (sampled labeled by station and depth as S#D# in the top row). A separate table with the latitudes, longitudes, and depths for each station is also included here