A new diatom species P. Hallegraeffii sp. Nov. Belonging to the toxic genus Pseudo-nitzschia (Bacillariophyceae) from the East Australian Current

© 2018 Ajani et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. A new species belonging to the toxin producing diatom genus Pseudo-nitzschia, P. hallegraeffii sp. nov., is delineated and described from the East Australian Current (EAC). Clonal cultures were established by single cell isolation from phytoplankton net hauls collected as part of a research expedition in the EAC region in 2016 on the RV Investigator. Cultures were assessed for their morphological and genetic characteristics, their sexual compatibility with other Pseudo-nitzschia species, and their ability to produce domoic acid. Light and transmission electron microscopy revealed cells which differed from their closest relatives by their cell width, rows of poroids, girdle band structure and density of band straie. Phylogenetic analyses based on sequencing of nuclear-encoded ribosomal deoxyribonucleic acid (rDNA) regions showed this novel genotype clustered within the P. delicatissima complex, but formed a discrete clade from its closest relatives P. dolorosa, P. simulans, P. micropora and P. delicatissima. Complementary base changes (CBCs) were observed in the secondary structure of the 3’ nuclear ribosomal transcribed spacer sequence region (ITS2) between P. hallegraeffii sp. nov. and its closest related taxa, P. simulans and P. dolorosa. Under laboratory conditions, and in the absence of any zooplankton cues, strains of P. hallegraeffii sp. nov. did not produce domoic acid (DA) and were not sexually compatible with any other Pseudo-nitzschia clones tested. A total of 18 Pseudo-nitzschia species, including three confirmed toxigenic species (P. cuspidata, P. multistriata and P. australis) have now been unequivocally confirmed from eastern Australia

West African equatorial ionospheric parameters climatology based on Ouagadougou ionosonde station data from June 1966 to February 1998

This study is the first which gives the climatology of West African equatorial ionosphere by using Ouagadougou station through three solar cycles. It has permitted to show the complete morphology of ionosphere parameters by analyzing yearly variation, solar cycle and geomagnetic activity, seasonal evolution and diurnal development. This work shows that almost all ionospheric parameters have 11-year solar cycle evolution. Seasonal variation shows that only <I>fo</I>F2 exhibits annual, winter and semiannual anomaly. <I>fo</I>F2 seasonal variation has permitted us to identify and characterize solar events effects on F2 layer in this area. In fact (1) during quiet geomagnetic condition <I>fo</I>F2 presents winter and semiannual anomalies asymmetric peaks in March/April and October. (2) The absence of winter anomaly and the presence of equinoctial peaks are the most visible effects of fluctuating activity in <I>fo</I>F2 seasonal time profiles. (3) Solar wind shock activity does not modify the profile of <I>fo</I>F2 but increases ionization. (4) The absence of asymmetry peaks, the location of the peaks in March and October and the increase of ionization characterize recurrent storm activity. F1 layers shows increasing trend from cycle 20 to cycle 21. Moreover, E layer parameters seasonal variations exhibit complex structure. It seems impossible to detect fluctuating activity effect in E layer parameters seasonal variations but shock activity and wind stream activity act to decrease E layer ionization. It can be seen from Es layer parameters seasonal variations that wind stream activity effect is fairly independent of solar cycle. E and Es layers critical frequencies and virtual heights diurnal variations let us see the effects of the greenhouse gases in these layers

Modelling paralytic shellfish toxins (PST) accumulation in Crassostrea gigas by using Dynamic Energy Budgets (DEB)

As other filter-feeders, Crassostrea gigas can concentrate paralytic shellfish toxins (PST) by consuming dinoflagellate phytoplankton species like Alexandrium minutum. Intake of PST in oyster tissues mainly results from feeding processes, i.e. clearance rate, pre-ingestive sorting and ingestion that are directly influenced by environmental conditions (trophic sources, temperature). This study aimed to develop a mechanistic model coupling the kinetics of PST accumulation and bioenergetics in C. gigas based on Dynamic Energy Budget (DEB) theory. For the first time, the Synthesizing Units (SU) concept was applied to formalize the feeding preference of oysters between non-toxic and toxic microalgae. Toxin intake and accumulation were both dependent on the physiological status of oysters. The accumulation was modelled through the dynamics of two toxin compartments: (1) a compartment of ingested but non-assimilated toxins, with labile toxins within the digestive gland eliminated via faeces production; (2) a compartment of assimilated toxins with a rapid detoxification rate (within a few days). Firstly, the DEB-PST model was calibrated using data from two laboratory experiments where oysters have been exposed to A. minutum. Secondly, it was validated using data from another laboratory experiment and from three field surveys carried out in the Bay of Brest (France) from 2012 to 2014. To account for the variability in PST content of A. minutum cells, the saxitoxin (STX) amount per energy units in a toxic algae (ρPST) was adjusted for each dataset. Additionally, the effects of PST on the oyster bioenergetics were calibrated during the first laboratory experiment. However, these effects were shown to depend on the strain of A. minutum. Results of this study could be of great importance for monitoring agencies and decision makers to identify risky conditions (e.g. production areas, seawater temperature), to properly assess detoxification step (e.g. duration, modalities) before any commercialization or to improve predictions regarding closing of shellfish areas

International equatorial electrojet year : the African sector

International audienceThis paper presents the IEEY project in the African sector. The amount of our interpreted data is presently too short to allow proper scientific conclusions. Nevertheless, fist typical results illustrate our network possibilities. Some preliminary observations are briefly pre- , sented for their interest towards immediate research goals

Why is Asari (=Manila) clam Ruditapes philippinarum fitness poor in Arcachon Bay: A meta-analysis to answer?

00000 ; International audience ; Asari (= Manila) clam, Ruditapes philippinarum, is the second bivalve mollusc in terms of production in the world and, in many coastal areas, can beget important socio-economic issues. In Europe, this species was introduced after 1973. In Arcachon Bay, after a decade of aquaculture attempt, Asari clam rapidly constituted neo-naturalized population which is now fished. However, recent studies emphasized the decline of population and individual performances. In the framework of a national project (REPAMEP), some elements of fitness, stressors and responses in Arcachon bay were measured and compared to international data (41 publications, 9 countries). The condition index (CI=flesh weight/shell weight) was the lowest among all compared sites. Variation in average Chla concentration explained 30% of variation of CI among different areas. Among potential diseases, perkinsosis was particularly prevalent in Arcachon Bay, with high abundance, and Asari clams underwent Brown Muscle Disease, a pathology strictly restricted to this lagoon. Overall element contamination was relatively low, although arsenic, cobalt, nickel and chromium displayed higher values than in other ecosystems where Asari clam is exploited. Finally, total hemocyte count (THC) of Asari clam in Arcachon Bay, related to the immune system activity, exhibited values that were also under what is generally observed elsewhere. In conclusion, this study, with all reserves due to heterogeneity of available data, suggest that the particularly low fitness of Asari clam in Arcachon Bay is due to poor trophic condition, high prevalence and intensity of a disease (perkinsosis), moderate inorganic contamination, and poor efficiency of the immune system

Ecophysiological responses of invasive and indigenous mytilids in the Ría de Vigo (NW Spain)

The impact of an alien species is correlated with its abundance and potential to colonise new environments. Consequently, the crucial aspects that give a mytilid species invasive potential include its strength and capacity for adhesion to a wide variety of substrates and its ecological tolerance to environmental conditions. The alien black pygmy mussel Xenostrobus securis settles together with the indigenous and raft cultured mussel Mytilus galloprovincialis on hard substrates of the inner coastline of the Ría de Vigo (Atlantic Coast NW Spain). Key parameters for the ecological success of these species could include their byssus structure and ecological plasticity. In this study, we assessed their comparative ability to attach to different substrates under different environmental conditions, using both in situ and laboratory approaches. Byssus threads secreted by X. securis were found to be extremely thin and their thickness did not vary with mussel size. This thinness of byssus filaments in X. securis was compensated by the secretion of a huge number (up to thousand of byssus filaments). Although no increase in attachment strength was found with increasing mussel size in this species, multiple byssus thread secretion might be a key factor in the successful invasion of inner areas of the estuary. Furthermore, X. securis exposes a much lower shell area to lift and drag forces in mussel conglomerates. By contrast, the indigenous species M. galloprovincialis secretes thicker byssus threads, which provide stronger in situ attachment displaying a linear increase in strength relative to the size of mussels. The exposure of both mytilid species to different abiotic factors in the laboratory confirmed the weaker byssus secretion and limited variation in attachment strength in the alien species. On one hand, X. securis seemed to be better adapted to life on soft bottoms and not capable of much plasticity when attached to different substrates. However, X. securis might be also well adapted to variable environmental conditions, e.g., salinity fluctuations, with no need to modify its byssus properties to ensure secure attachment. Attachment strength of M. galloprovincialis was higher than X. securis in all abiotic conditions tested. Results are discussed in relation to the ecological tolerance and impact of these mytilid species. © EDP Sciences, IFREMER, IRD 2011

Method for Determining Apparent Digestibility of Carbohydrate and Protein Sources for Artificial Diets for Juvenile Sea Cucumber, Australostichopus mollis

Effective nursery diets can greatly reduce the cost of producing juvenile sea cucumbers for release to aquaculture or restocking programs. However, methods for systematically testing the bioavailability of artificial diet ingredients for sea cucumbers are poorly developed, and consequently, there has been little research in this field. The current study presents methods developed to test the suitability of common carbohydrate and protein sources for inclusion in artificial diets for juvenile Australostichopus mollis. Apparent digestibility of carbohydrates was moderate and did not exceed 50% for any carbohydrates assayed. Wheat starch and carrageenans showed the highest digestibility amongst carbohydrates. Differences in apparent digestibility were not reflected in growth performance of juvenile A. mollis fed carbohydrate diets; overall growth performance was poor for all diets. Artificial protein sources consistently exhibited higher apparent digestibility, ranging from 75.1% for fish meal to 98.1% for casein. Low-cost protein sources, like meat meal, show promise for future use in artificial diet formulation. However, delivering high protein content may reduce ingestion rates and thereby lower overall digestive efficiency in juveniles. Results show that artificial carbohydrate sources have some potential as diet constituents for juvenile sea cucumbers but are unsuitable as primary energy sources. Future testing of artificial carbohydrate sources for A. mollis may require predigestion to improve digestibility. © by the World Aquaculture Society 2011

West African equatorial ionospheric parameters climatology based on Ouagadougou ionosonde station data from June 1966 to February 1998

This study is the first which gives the climatology of West African equatorial ionosphere by using Ouagadougou station through three solar cycles. It has permitted to show the complete morphology of ionosphere parameters by analyzing yearly variation, solar cycle and geomagnetic activity, seasonal evolution and diurnal development. This work shows that almost all ionospheric parameters have 11-year solar cycle evolution. Seasonal variation shows that only foF2 exhibits annual, winter and semiannual anomaly. foF2 seasonal variation has permitted us to identify and characterize solar events effects on F2 layer in this area. In fact (1) during quiet geomagnetic condition foF2 presents winter and semiannual anomalies asymmetric peaks in March/April and October. (2) The absence of winter anomaly and the presence of equinoctial peaks are the most visible effects of fluctuating activity in foF2 seasonal time profiles. (3) Solar wind shock activity does not modify the profile of foF2 but increases ionization. (4) The absence of asymmetry peaks, the location of the peaks in March and October and the increase of ionization characterize recurrent storm activity. F1 layers shows increasing trend from cycle 20 to cycle 21. Moreover, E layer parameters seasonal variations exhibit complex structure. It seems impossible to detect fluctuating activity effect in E layer parameters seasonal variations but shock activity and wind stream activity act to decrease E layer ionization. It can be seen from Es layer parameters seasonal variations that wind stream activity effect is fairly independent of solar cycle. E and Es layers critical frequencies and virtual heights diurnal variations let us see the effects of the greenhouse gases in these layers