The Fossil Phase in the Life of a Galaxy Group

We investigate the origin and evolution of fossil groups in a concordance LCDM cosmological simulation. We consider haloes with masses between (1-5)\times10^{13} \hMsun and study the physical mechanisms that lead to the formation of the large gap in magnitude between the brightest and the second most bright group member, which is typical for these fossil systems. Fossil groups are found to have high dark matter concentrations, which we can relate to their early formation time. The large magnitude-gaps arise after the groups have build up half of their final mass, due to merging of massive group members. We show that the existence of fossil systems is primarily driven by the relatively early infall of massive satellites, and that we do not find a strong environmental dependence for these systems. In addition, we find tentative evidence for fossil group satellites falling in on orbits with typically lower angular momentum, which might lead to a more efficient merger onto the host. We find a population of groups at higher redshifts that go through a ``fossil phase'': a stage where they show a large magnitude-gap, which is terminated by renewed infall from their environment.Comment: 9 pages and 8 figures, submitted to MNRA

Techniques for measuring weight bearing during standing and walking

OBJECTIVE: To classify and assess techniques for measuring the amount of weight bearing during standing and walking.BACKGROUND: A large variety of weight bearing measuring techniques exists. This review describes their advantages and limitations to assist clinicians and researchers in selecting a technique for their specific application in measuring weight bearing.METHODS: A literature search was performed in Pubmed-Medline, CINAHL, and EMBASE. Measurement techniques were classified in 'clinical examination', 'scales', 'biofeedback systems', 'ambulatory devices' and 'platforms', and assessed on aspects of methodological quality, application, and feasibility.RESULTS: A total of 68 related articles was evaluated. The clinical examination technique is a crude method to estimate the amount of weight bearing. Scales are useful for static measurements to evaluate symmetry in weight bearing. Biofeedback systems give more reliable, accurate and objective data on weight bearing compared to clinical examination and scales, but the high costs could limit their use in physical therapy departments. The ambulatory devices can measure weight bearing with good accuracy and reliability in the hospital and at home. Platforms have the best methodological quality, but are mostly restricted to a gait laboratory, need trained personnel, and are expensive.CONCLUSIONS: The choice of a technique largely depends upon the criteria discussed in this review; however the clinical utilisation, the research question posed, and the available budget also play a role. The new developments seen in the field of 'ambulatory devices' are aimed at extending measuring time, and improved practicality in data collection and data analysis. For these latter devices, however, mainly preliminary studies have been published about devices that are not (yet) commercially available.</p

Wildfire may increase habitat quality for spring Chinook salmon in the Wenatchee River subbasin, WA, USA

Pacific Northwest salmonids are adapted to natural disturbance regimes that create dynamic habitat patterns over space and through time. However, human land use, particularly long-term fire suppression, has altered the intensity and frequency of wildfire in forested upland and riparian areas. To examine the potential impacts of wildfire on aquatic systems, we developed stream-reach-scale models of freshwater habitat for three life stages (adult, egg/fry, and juvenile) of spring Chinook salmon (Oncorhynchus tshawytscha) in the Wenatchee River subbasin, Washington. We used variables representing pre- and post-fire habitat conditions and employed novel techniques to capture changes in in-stream fine sediment, wood, and water temperature. Watershed-scale comparisons of high-quality habitat for each life stage of spring Chinook salmon habitat suggested that there are smaller quantities of high-quality juvenile overwinter habitat as compared to habitat for other life stages. We found that wildfire has the potential to increase quality of adult and overwintering juvenile habitat through increased delivery of wood, while decreasing the quality of egg and fry habitat due to the introduction of fine sediments. Model results showed the largest effect of fire on habitat quality associated with the juvenile life stage, resulting in increases in high-quality habitat in all watersheds. Due to the limited availability of pre-fire high-quality juvenile habitat, and increased habitat quality for this life stage post-fire, occurrence of characteristic wildfires would likely create a positive effect on spring Chinook salmon habitat in the Wenatchee River subbasin. We also compared pre- and post-fire model results of freshwater habitat for each life stage, and for the geometric mean of habitat quality across all life stages, using current compared to the historic distribution of spring Chinook salmon. We found that spring Chinook salmon are currently distributed in stream channels in which in-stream habitat for most life stages has a consistently positive response to fire. This compares to the historic distribution of spring Chinook, in which in-stream habitat exhibited a variable response to fire, including decreases in habitat quality overall or for specific life stages. This suggests that as the distribution of spring Chinook has decreased, they now occupy those areas with the most positive potential response to fire. Our work shows the potentially positive link between wildfire and aquatic habitat that supports forest managers in setting broader goals for fire management, perhaps leading to less fire suppression in some situations

The cosmic web for density perturbations of various scales

We follow the evolution of galaxy systems in numerical simulation. Our goal is to understand the role of density perturbations of various scales in the formation and evolution of the cosmic web. We perform numerical simulations with the full power spectrum of perturbations, and with spectrum cut at long wavelengths. Additionally, we have one model, where we cut the intermediate waves. We analyze the density field and study the void sizes and density field clusters in different models. Our analysis shows that the fine structure (groups and clusters of galaxies) is created by small-scale density perturbations of scale $\leq 8$ \Mpc. Filaments of galaxies and clusters are created by perturbations of intermediate scale from $\sim 8$ to $\sim 32$ \Mpc, superclusters of galaxies by larger perturbations. We conclude that the scale of the pattern of the cosmic web is determined by density perturbations of scale up to $\sim 100$ \Mpc. Larger perturbations do not change the pattern of the web, but modulate the richness of galaxy systems, and make voids emptier. The stop of the increase of the scale of the pattern of the cosmic web with increasing scale of density perturbations can probably be explained as the freezing of the web at redshift $z\simeq 0.7$.Comment: 12 pages, 7 figures, accepted for publication in Astronomy and Astrophysic

Cool, Pathogen-Free Refuge Lowers Pathogen-Associated Prespawn Mortality of Willamette River Chinook Salmon

Spring Chinook Salmon Oncorhynchus tshawytscha are transported above dams in the Willamette River to provide access to blocked spawning habitat. However, 30–95% of these transplants may die before spawning in some years. To varying degrees, salmon in other tributaries—both blocked and unblocked—have similar prespawn mortality (PSM) rates. Our study determined whether holding fish in constant temperature, pathogen-free conditions prior to spawning increased survival through spawning in 2010 through 2012. In addition, we evaluated pathogens as a potential cause of PSM. To monitor survival we captured adult Chinook Salmon early and late in the season from the lower Willamette River and upper tributaries and held them until spawning in 13°C, pathogen-free water. Samples were collected at the time of transport, from moribund or dead fish throughout the summer, and after spawning in the autumn. Prespawn mortalities and postspawned fish from river surveys on holding and spawning reaches above traps were also sampled. Necropsies were performed on all fish, and representative organs were processed for histopathological analysis. Using multiple logistic regression odds ratio analysis, fish that were held were up to 12.6 times less likely to experience PSM than fish that were outplanted to the river. However, Aeromonas salmonicida and Renibacterium salmoninarum were more prevalent in held fish that had PSM than in outplanted fish with PSM, suggesting that fish that were held were more susceptible to these bacteria. Spawned held fish were more likely to have Myxobolus sp. brain infections and less likely to be infected with the kidney myxozoan, Parvicapusla minibicornis, than were spawned outplanted fish. The equal likelihood of other pathogens for held fish and outplanted spawned fish suggests interactive effects determine survival and that holding Chinook Salmon at 13°C prevented expression of lethal pathogenesis. Overall, holding could be a viable method to reduce PSM, but issues of transport stress, proliferative disease, and antibiotics remain

How Noisy Adaptation of Neurons Shapes Interspike Interval Histograms and Correlations

Channel noise is the dominant intrinsic noise source of neurons causing variability in the timing of action potentials and interspike intervals (ISI). Slow adaptation currents are observed in many cells and strongly shape response properties of neurons. These currents are mediated by finite populations of ionic channels and may thus carry a substantial noise component. Here we study the effect of such adaptation noise on the ISI statistics of an integrate-and-fire model neuron by means of analytical techniques and extensive numerical simulations. We contrast this stochastic adaptation with the commonly studied case of a fast fluctuating current noise and a deterministic adaptation current (corresponding to an infinite population of adaptation channels). We derive analytical approximations for the ISI density and ISI serial correlation coefficient for both cases. For fast fluctuations and deterministic adaptation, the ISI density is well approximated by an inverse Gaussian (IG) and the ISI correlations are negative. In marked contrast, for stochastic adaptation, the density is more peaked and has a heavier tail than an IG density and the serial correlations are positive. A numerical study of the mixed case where both fast fluctuations and adaptation channel noise are present reveals a smooth transition between the analytically tractable limiting cases. Our conclusions are furthermore supported by numerical simulations of a biophysically more realistic Hodgkin-Huxley type model. Our results could be used to infer the dominant source of noise in neurons from their ISI statistics

Innate and adaptive immune responses in migrating spring-run adult chinook salmon, Oncorhynchus tshawytscha

Adult Chinook salmon (Oncorhynchus tshawytscha) migrate from salt water to freshwater streams to spawn. Immune responses in migrating adult salmon are thought to diminish in the run up to spawning, though the exact mechanisms for diminished immune responses remain unknown. Here we examine both adaptive and innate immune responses as well as pathogen burdens in migrating adult Chinook salmon in the Upper Willamette River basin. Messenger RNA transcripts encoding antibody heavy chain molecules slightly diminish as a function of time, but are still present even after fish have successfully spawned. In contrast, the innate anti-bacterial effector proteins present in fish plasma rapidly decrease as spawning approaches. Fish also were examined for the presence and severity of eight different pathogens in different organs. While pathogen burden tended to increase during the migration, no specific pathogen signature was associated with diminished immune responses. Transcript levels of the immunosuppressive cytokines IL-10 and TGF beta were measured and did not change during the migration. These results suggest that loss of immune functions in adult migrating salmon are not due to pathogen infection or cytokine-mediated immune suppression, but is rather part of the life history of Chinook salmon likely induced by diminished energy reserves or hormonal changes which accompany spawning.Keywords: Parasite burden, Salmon, Immune respons

A discrete time neural network model with spiking neurons II. Dynamics with noise

We provide rigorous and exact results characterizing the statistics of spike trains in a network of leaky integrate and fire neurons, where time is discrete and where neurons are submitted to noise, without restriction on the synaptic weights. We show the existence and uniqueness of an invariant measure of Gibbs type and discuss its properties. We also discuss Markovian approximations and relate them to the approaches currently used in computational neuroscience to analyse experimental spike trains statistics.Comment: 43 pages - revised version - to appear il Journal of Mathematical Biolog

Fossil Groups Origins: I. RX J105453.3+552102 a very massive and relaxed system at z~0.5

The most accepted scenario for the origin of fossil groups (FGs) is that they are galaxy associations in which the merging rate was fast and efficient. These systems have assembled half of their mass at early epoch of the Universe, subsequently growing by minor mergers. They could contain a fossil record of the galaxy structure formation. We have started a project in order to characterize a large sample of FGs. In this paper we present the analysis of the fossil system RX J105453.3+552102. Optical deep images were used for studying the properties of the brightest group galaxy and for computing the photometric luminosity function of the group. We have also performed a detail dynamical analysis of the system based on redshift data for 116 galaxies. This galaxy system is located at z=0.47, and shows a quite large line-of-sight velocity dispersion \sigma_{v}~1000 km/s. Assuming the dynamical equilibrium, we estimated a virial mass of M ~ 10^{15} h_{70} M_{\odot}. No evidence of substructure was found within 1.4 Mpc radius. We found a statistically significant departure from Gaussianity of the group members velocities in the most external regions of the group. This could indicate the presence of galaxies in radial orbits in the external region of the group. We also found that the photometrical luminosity function is bimodal, showing a lack of M_{r} ~ -19.5 galaxies. The brightest group galaxy shows low Sersic parameter (n~2) and a small peculiar velocity. Indeed, our accurate photometry shows that the difference between the brightest and the second brightest galaxies is 1.9 mag in the r-band, while the classical definition of FGs is based on a magnitude gap of 2. We conclude that this fossil system does not follow the empirical definition of FGs. Nevertheless, it is a massive, old and undisturbed galaxy system with little infall of L^{*} galaxies since its initial collapse.Comment: 17 pages, 14 figures, accepted for publication at A&