Age-Heterogeneity in Marine Sediments Revealed by Three-Dimensional High-Resolution Radiocarbon Measurements

Marine sedimentary archives are routinely used to reconstruct past environmental changes. In many cases, bioturbation and sedimentary mixing affect the proxy time-series and the age-depth relationship. While idealized models of bioturbation exist, they usually assume homogeneous mixing, thus that a single sample is representative for the sediment layer it is sampled from. However, it is largely unknown to which extent this assumption holds for sediments used for paleoclimate reconstructions. To shed light on 1) the age-depth relationship and its full uncertainty, 2) the magnitude of mixing processes affecting the downcore proxy variations, and 3) the representativity of the discrete sample for the sediment layer, we designed and performed a case study on South China Sea sediment material which was collected using a box corer and which covers the last glacial cycle. Using the radiocarbon content of foraminiferal tests as a tracer of time, we characterize the spatial age-heterogeneity of sediments in a three-dimensional setup. In total, 118 radiocarbon measurements were performed on defined small- and large-volume bulk samples ( ∼ 200 specimens each) to investigate the horizontal heterogeneity of the sediment. Additionally, replicated measurements on small numbers of specimens (10 × 5 specimens) were performed to assess the heterogeneity within a sample volume. Visual assessment of X-ray images and a quantitative assessment of the mixing strength show typical mixing from bioturbation corresponding to around 10 cm mixing depth. Notably, our 3D radiocarbon distribution reveals that the horizontal heterogeneity (up to 1,250 years), contributing to the age uncertainty, is several times larger than the typically assumed radiocarbon based age-model error (single errors up to 250 years). Furthermore, the assumption of a perfectly bioturbated layer with no mixing underneath is not met. Our analysis further demonstrates that the age-heterogeneity might be a function of sample size; smaller samples might contain single features from the incomplete mixing and are thus less representative than larger samples. We provide suggestions for future studies, optimal sampling strategies for quantitative paleoclimate reconstructions and realistic uncertainty in age models, as well as discuss possible implications for the interpretation of paleoclimate records

Lateral variability of ichnological content in muddy contourites: Weak bottom currents affecting organisms’ behavior

Although bioturbation is commonly recognized in contourites, only a few studies have analyzed the ichnological content of these deposits in detail. These studies have mainly focused on meso-scale bigradational sequence (a coarsening upward followed by a fining-upward sequence resulting from variations in current velocity). Here we present data from gravitational cores collected along the NW Iberian Margin showing systematic variation in ichnological content across proximal to distal depocenters within a large-scale elongated contourite drift. Data demonstrate that tracemakers’ behavior varies depending on the distance relative to the bottom current core. Trace fossils are already known to be a useful tool for studying of contouritic deposits and are even used as criterion for differentiating associated facies (e.g., turbidites, debrites), though not without controversy. We propose a mechanism by which the distance to the bottom current core exerts tangible influence on specific macro-benthic tracemaker communities in contourite deposits. This parameter itself reflects other bottom current features, such as hydrodynamic energy, grain size, nutrient transport, etc. Ichnological analysis can thus resolve cryptic features of contourite drift depositional settings.The contribution and research by JD was funded through the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 792314 (ICON-SE). The research of FJR-T was funded by project CGL2015-66835-P (Secretaría de Estado de Investigacion, Desarrollo e Innovacion, Spain), Research Group RNM-178 (Junta de Andalucía), and Scientific Excellence Unit UCE-2016- 05 (Universidad de Granada). AM’s research is funded by the I2C program of the Xunta de Galicia Postdoctoral programme (ED481B 2016/029-0). The research was conducted as part of “The Drifters Research Group” (RHUL) and “Ichnology and Palaeoenvironment Research Group” (UGR) programs

Stratigraphic Occurrences of Sub-Polar Planktic Foraminifera in Pleistocene Sediments on the Lomonosov Ridge, Arctic Ocean

Turborotalita quinqueloba is a species of planktic foraminifera commonly found in the sub-polar North Atlantic along the pathway of Atlantic waters in the Nordic seas and sometimes even in the Arctic Ocean, although its occurrence there remains poorly understood. Existing data show that T. quinqueloba is scarce in Holocene sediments from the central Arctic but abundance levels increase in sediments from the last interglacial period [Marine isotope stage (MIS) 5, 71–120 ka] in cores off the northern coast of Greenland and the southern Mendeleev Ridge. Turborotalita also occurs in earlier Pleistocene interglacials in these regions, with a unique and widespread occurrence of the less known Turborotalita egelida morphotype, proposed as a biostratigraphic marker for MIS 11 (474–374 ka). Here we present results from six new sediment cores, extending from the central to western Lomonosov Ridge, that show a consistent Pleistocene stratigraphy over 575 km. Preliminary semi-quantitative assessments of planktic foraminifer abundance and assemblage composition in two of these records (LOMROG12-7PC and AO16-5PC) reveal two distinct stratigraphic horizons containing Turborotalita in MIS 5. Earlier occurrences in Pleistocene interglacials are recognized, but contain significantly fewer specimens and do not appear to be stratigraphically coeval in the studied sequences. In all instances, the Turborotalita specimens resemble the typical T. quinqueloba morphotype but are smaller (63–125 μm), smooth-walled and lack the final thickened calcite layer common to adults of the species. These results extend the geographical range for T. quinqueloba in MIS 5 sediments of the Arctic Ocean and provide compelling evidence for recurrent invasions during Pleistocene interglacials

Uncertainties in seawater thermometry deriving from intratest and intertest Mg/Ca variability in <em>Globigerinoides ruber</em>

Laser ablation inductively coupled plasma-mass spectrometry microanalysis of fossil and live Globigerinoides ruber from the eastern Indian Ocean reveals large variations of Mg/Ca composition both within and between individual tests from core top or plankton pump samples. Although the extent of intertest and intratest compositional variability exceeds that attributable to calcification temperature, the pooled mean Mg/Ca molar values obtained for core top samples between the equator and &gt;30°S form a strong exponential correlation with mean annual sea surface temperature (Mg/Ca mmol/mol = 0.52 exp0.076SST°C, r2 = 0.99). The intertest Mg/Ca variability within these deep-sea core top samples is a source of significant uncertainty in Mg/Ca seawater temperature estimates and is notable for being site specific. Our results indicate that widely assumed uncertainties in Mg/Ca thermometry may be underestimated. We show that statistical power analysis can be used to evaluate the number of tests needed to achieve a target level of uncertainty on a sample by sample case. A varying bias also arises from the presence and varying mix of two morphotypes (G. ruber ruber and G. ruber pyramidalis), which have different mean Mg/Ca values. Estimated calcification temperature differences between these morphotypes range up to 5°C and are notable for correlating with the seasonal range in seawater temperature at different sites. Copyright 2008 by the American Geophysical Union

New insights into the genetic etiology of Alzheimer's disease and related dementias

Characterization of the genetic landscape of Alzheimer's disease (AD) and related dementias (ADD) provides a unique opportunity for a better understanding of the associated pathophysiological processes. We performed a two-stage genome-wide association study totaling 111,326 clinically diagnosed/'proxy' AD cases and 677,663 controls. We found 75 risk loci, of which 42 were new at the time of analysis. Pathway enrichment analyses confirmed the involvement of amyloid/tau pathways and highlighted microglia implication. Gene prioritization in the new loci identified 31 genes that were suggestive of new genetically associated processes, including the tumor necrosis factor alpha pathway through the linear ubiquitin chain assembly complex. We also built a new genetic risk score associated with the risk of future AD/dementia or progression from mild cognitive impairment to AD/dementia. The improvement in prediction led to a 1.6- to 1.9-fold increase in AD risk from the lowest to the highest decile, in addition to effects of age and the APOE ε4 allele

New insights into the genetic etiology of Alzheimer's disease and related dementias

Characterization of the genetic landscape of Alzheimer's disease (AD) and related dementias (ADD) provides a unique opportunity for a better understanding of the associated pathophysiological processes. We performed a two-stage genome-wide association study totaling 111,326 clinically diagnosed/'proxy' AD cases and 677,663 controls. We found 75 risk loci, of which 42 were new at the time of analysis. Pathway enrichment analyses confirmed the involvement of amyloid/tau pathways and highlighted microglia implication. Gene prioritization in the new loci identified 31 genes that were suggestive of new genetically associated processes, including the tumor necrosis factor alpha pathway through the linear ubiquitin chain assembly complex. We also built a new genetic risk score associated with the risk of future AD/dementia or progression from mild cognitive impairment to AD/dementia. The improvement in prediction led to a 1.6- to 1.9-fold increase in AD risk from the lowest to the highest decile, in addition to effects of age and the APOE ε4 allele

Multiancestry analysis of the HLA locus in Alzheimer’s and Parkinson’s diseases uncovers a shared adaptive immune response mediated by HLA-DRB1*04 subtypes

Across multiancestry groups, we analyzed Human Leukocyte Antigen (HLA) associations in over 176,000 individuals with Parkinson’s disease (PD) and Alzheimer’s disease (AD) versus controls. We demonstrate that the two diseases share the same protective association at the HLA locus. HLA-specific fine-mapping showed that hierarchical protective effects of HLA-DRB1*04 subtypes best accounted for the association, strongest with HLA-DRB1*04:04 and HLA-DRB1*04:07, and intermediary with HLA-DRB1*04:01 and HLA-DRB1*04:03. The same signal was associated with decreased neurofibrillary tangles in postmortem brains and was associated with reduced tau levels in cerebrospinal fluid and to a lower extent with increased Aβ42. Protective HLA-DRB1*04 subtypes strongly bound the aggregation-prone tau PHF6 sequence, however only when acetylated at a lysine (K311), a common posttranslational modification central to tau aggregation. An HLA-DRB1*04-mediated adaptive immune response decreases PD and AD risks, potentially by acting against tau, offering the possibility of therapeutic avenues

Late Quaternary spatial and temporal variability in Arctic deep-sea bioturbation and its relation to Mn cycles

Changes in intensity and composition of bioturbation and trace fossils in deep-sea settings are directly related to changes in environmental parameters such as food availability, bottom water oxygenation, or substrate consistency. Because trace fossils are practically always preserved in situ, and are often present in environments where other environmental indicators are scarce or may have been compromised or removed by diagenetic processes, the trace fossils provide an important source of paleoenvironmental information in regions such as the deep Arctic Ocean. Detailed analysis of X-ray radiographs from 12 piston and gravity cores from a transect spanning from the Makarov Basin to the Yermak Plateau via the Lomonosov Ridge, the Morris Jesup Rise, and the Gakkel Ridge reveal both spatial and temporal variations in an ichnofauna consisting of Chondrites, Nereites, Phycosiphon, Planolites, Scolicia, Trichichnus, Zoophycos, as well as deformational biogenic structures. The spatial variability in abundance and diversity is in close correspondence to observed patterns in the distribution of modern benthos, suggesting that food availability and food flux to the sea floor are the most important parameters controlling variations in bioturbation in the Arctic Ocean. The most diverse ichnofaunas were observed at sites on the central Lomonosov Ridge that today have partially ice free conditions and relatively high summer productivity. In contrast, the most sparse ichnofauna was observed in the ice-infested region on the Lomonosov Ridge north of Greenland. Since primary productivity, and therefore also the food flux at a certain location, is ultimately controlled by the geographical position in relation to ice margin and the continental shelves, temporal variations in abundance and diversity of trace fossils have the potential to reveal changes in food flux, and consequently sea ice conditions on glacial–interglacial time scales. Down core analysis reveal clearly increased abundance and diversity during interglacial/ interstadial intervals that were identified through strongly enhanced Mn levels and the presence of microand nannofossils. Warm stages are characterized by larger trace fossils such as Scolicia, Planolites or Nereites, while cold stages typically display an ichnofauna dominated by small deep penetrating trace fossils such as Chondrites or Trichichnus. The presence of biogenic structures in glacial intervals clearly show that the Arctic deep waters must have remained fairly well ventilated also during glacials, thereby lending support to the hypothesis that the conspicuous brown layers rich in Mn which are found ubiquitously over the Arctic basins are related to input from rivers and coastal erosion during sea level high-stands rather than redox processes in the water column and on the sea floor. However, the X-ray radiograph study also revealed the presence of apparently post-sedimentary, diagenetically formed Mn-layers which are not directly related to Mn input from rivers and shelves. These observations thus bolster the hypothesis that the bioturbated, brownish Mn-rich layers can be used for stratigraphic correlation over large distances in the Arctic Ocean, but only if post sedimentary diagenetic layers can be identified and accounted for in the Mn-cycle stratigraphy

Lake Kumphawapi — An archive of Holocene paleoenvironmental and paleoclimatic changes in northeast Thailand

The long-term climatic and environmental history of Southeast Asia, and of Thailand in particular, is still fragmentary. Here we present a new 14C-dated, multi-proxy sediment record (TOC, C/N, CNS isotopes, Si, Zr, K, Ti, Rb, Ca elemental data, biogenic silica) for Lake Kumphawapi, the second largest natural lake in northeast Thailand. The data set provides a reconstruction of changes in lake status, groundwater fluctuations, and catchment run-off during the Holocene. A comparison of multiple sediment sequences and their proxies suggests that the summer monsoon was stronger between c. 9800 and 7000 cal yr BP. Lake status and water level changes around 7000 cal yr BP signify a shift to lower effective moisture. By c. 6500 cal yr BP parts of the lake had been transformed into a peatland, while areas of shallow water still occupied the deeper part of the basin until c. 5400–5200 cal yr BP. The driest interval in Kumphawapi’s history occurred between c. 5200 and 3200 cal yr BP, when peat extended over large parts of the basin. After 3200 cal yr BP, the deepest part of the lake again turned into a wetland, which existed until c. 1600 cal yr BP. The observed lake-level rise after 1600 cal yr BP could have been caused by higher moisture availability, although increased human influence in the catchment cannot be ruled out. The present study highlights the use of multiple sediment sequences and proxies to study large lakes, such as Lake Kumphawapi in order to correctly assess the time transgressive response to past changes in hydroclimate conditions. Our new data set from northeast Thailand adds important paleoclimatic information for a region in Southeast Asia and allows discussing Holocene monsoon variability and ITCZ movement in greater detail