571 research outputs found
Evaluation of the nutritional quality of Chaetoceros muelleri Schütt (Chaetocerotales: Chaetocerotaceae) and Isochrysis sp. (Isochrysidales: isochrysidaceae) grown outdoors for the larval development of Litopenaeus vannamei (Boone, 1931) (Decapoda: Penaeidae)
The biomass, proximal composition and fatty acid profile of Isochrysis sp., Chaetoceros muelleri and their mixture, grown under greenhouse conditions, were evaluated. The nutritional value of both species supplied as the monoalgal (Chaetoceros muelleri: Diet I, and Isochrysis sp. Diet II) and mixed diet (Diet III) for larval Litopenaeus vannamei was also assessed on the basis of the development and biochemical composition of the larvae. The highest protein levels were obtained in Diets I and II (40% and 35%, respectively). No significant differences in larval survival were found among the diets; however, larvae fed on Diet II had the lowest mean larval length
New advances in genomics and epigenetics in antiphospholipid syndrome
APS patients exhibit a wide clinical heterogeneity in terms of the disease’s origin and progression. This diversity can be attributed to consistent aPL profiles and other genetic and acquired risk factors. Therefore, understanding the pathophysiology of APS requires the identification of specific molecular signatures that can explain the pro-atherosclerotic, pro-thrombotic and inflammatory states observed in this autoimmune disorder. In recent years, significant progress has been made in uncovering gene profiles and understanding the intricate epigenetic mechanisms and microRNA changes that regulate their expression. These advancements have highlighted the crucial role played by these regulators in influencing various clinical aspects of APS. This review delves into the recent advancements in genomic and epigenetic approaches used to uncover the mechanisms contributing to vascular and obstetric involvement in APS. Furthermore, we discuss the implementation of novel bioinformatics tools that facilitate the investigation of these mechanisms and pave the way for personalized medicine in APS
Validación del método de elaboración tradicional del extracto de vainilla (Vanilla planifolia A.) en la Sierra de Otontepec
El objetivo del trabajo fue evaluar el método de elaboración tradicional de los extractos elaborados con refino artesanal, procedentes de la región de la Sierra de Otontepec Veracruz, con el propósito de conocer sus características y generar información para determinar las ventajas de la concentración de vainillina que presenta cada una de las muestras analizadas. Se obtuvieron los perfiles químicos y se identificaron compuestos químicos utilizando columnas cromatografías además del perfil químico general, encontrando que el contenido de alcohol en los extractos, que elaboran los productores cuenta únicamente con el 14% de alcohol y lo mencionado en la NMX-FF-074-1996 dice que no debe ser menor del 30% por lo que no cumple con este requisito. Con respecto al contenido de vainillina los contenidos variaron de 348 a un 8,447 % (pm) por lo que cumplen con la Norma Oficial Mexicana que señala que el contenido mínimo de los extractos debe ser de 2,49 % en adelante, por lo tanto los extractos regionales se encuentran dentro de los parámetros y son aptos para su venta
Métodos para estimar requerimientos de cal en suelos ácidos acrisoles ferricos en Xalapa, Veracruz, México
Por su ubicación geográfica, México posee regiones tropicales y subtropicales, dichas regiones están limitadas por la marcada acidez de los suelos, siendo este fenómeno uno de los problemas más importantes en la producción de algunos cultivos. La práctica que se utiliza con el propósito de neutralizar la acidez y corregir los problemas que ésta ocasiona es el encalado de los suelos, sin embargo, para realizar esta práctica, debe considerarse la cantidad de cal por aplicar. La necesidad de cal varía de un suelo a otro, dependiendo de su naturaleza o del cultivo de que se trate, por lo que esta se debe determinar pare cada uno en particular. El suelo utilizado en esta investigación se localiza en las fincas cafetaleras “Las Animas1’ y “El Progreso”, en el municipio de Xalapa, Ver. Los resultados de este trabajo muestran que los métodos Houba y Van Schouwenburg, Dunn y SMP-Simple permiten estimar RC, para los pH considerados, con mayor exactitud que los métodos de Keeney y Corey (1963), Adams y Evans (1962), Acidez hidrolítica o de Kappen modificado (1976), Acidez intercambiable (1970) y el de Morejon (1988)
Penicillin susceptibility among invasive MSSA infections: a multicentre study in 16 Spanish hospitals
Objectives: To determine the prevalence of penicillin susceptibility among MSSA causing bloodstream infections (BSIs) in 16 Spanish hospitals and to characterize the penicillin-susceptible MSSA (MSSA-PENS) isolates. Methods: A total of 1011 Staphylococcus aureus isolates were collected from blood cultures in 16 Spanish hospitals during 2018–19 (6–12 months) and their susceptibility to 18 antimicrobials was determined. The MSSA-PENS isolates were selected and examined by PCR to determine the presence of the blaZ gene, other resistance genes and the genes lukF/lukS-PV, eta, etb and tst. The immune evasion cluster (IEC) type was also analysed. All the MSSA-PENS isolates were submitted to S. aureus protein A (spa) typing and the clonal complexes (CCs) were assigned according to their spa type. Results: The prevalence of MSSA was 74.6% (754/1011) and 14.9% (151/1011) were MSSA-PENS-blaZnegative. MSSA-PENS-blaZnegative isolates (n = 151) were ascribed to 88 spa types and 11 CCs. The most frequent CCs were CC5 (35/151) and CC398 (25/151), with t002-CC5 and t571-CC398 being the most common lineages. Pan-susceptibility was identified in 117 of the 151 MSSA-PENS-blaZnegative isolates (77.5%). In the remaining isolates, erythromycin and clindamycin resistance was the most frequent resistance found, although tobramycin, ciprofloxacin, fusidic acid, mupirocin and/or tetracycline resistance was also detected. Thirty-eight MSSA-PENS-blaZnegative isolates were IEC negative and four isolates were Panton–Valentine leucocidin (‘PVL’) positive. Conclusions: A high penicillin susceptibility rate was detected among MSSA, opening therapeutic opportunities for BSIs. The emergence of new successful MSSA-PENS clones could be responsible for these data. The detection among MSSA-PENS-blaZnegative isolates of the clonal lineage CC398 or the absence of an IEC raises questions about their possible animal origin, requiring further analysis
Perceived control over menopausal hot flushes in mid-aged women
Background. Hot flushes (HFs) and night sweats are frequent complaints among both peri- and postmenopausal women.
Perceived control of this complaint may vary from one population to another.
Objective. To assess perceived control over menopausal HFs and determinant factors among mid-aged Ecuadorian women.
Methods. In this cross-sectional study healthy women aged 40–59 years, seeking healthcare centres of eight main cities of
Ecuador with more than 100,000 inhabitants, were assessed with the Menopause Rating Scale (MRS) and those presenting
HFs were requested to fill out the Perceived Control Index (PCI) and a questionnaire containing socio-demographic data
(female and partner).
Results. A total of 1154 women participated in this study of which 56% presented HFs (n ¼ 646). According to the MRS,
29.1% and 9.1% of these HFs were graded as severe and very severe, respectively. Mean age of women presenting HFs was
49.5 + 5.2 years, with 51.9% having 12 years or less of education, 61.5% being postmenopausal and 47.2% living in high
altitude. At the moment of the survey 13.9% were on hormone therapy, 12.8% on phytoestrogens and 7.1% on psychotropic
drugs. There was a significant decreasing trend for PCI scores (total and difficulty in control items) from one menopausal
stage to the next, with no differences observed for time since menopause onset. Despite this, logistic regression analysis
determined that HF severity, as determined with the MRS, was the only single predictive factor related to lower HF perceived
control (total PCI score 538) (OR: 1.83 CI 95% [1.15–2.90], p 5 0.01).
Conclusion. As determined with the PCI, HF severity was related to a lower perceived control among mid-aged women.0000-0002-2545-4733Cuenc
Crafting History: How the World Is Made. The Case of Islamic Archaeology
In this paper an archaeological and theoretical perspective that builds a relationship between the concepts of craft and of identity is presented. Both of them are concepts very widely used in archaeological and anthropological theory nowadays, and they have often been linked in field studies. However, these concepts are usually contemplated from very different points of view and with many diverse implications in each case. One of the aims of this paper is to show that craft and identity can be inserted in a common theoretical framework which in turn can be used to understand cultural change or, in other words, history within culture. The paper will start with a necessary theoretical introduction to different concepts related to craft and identity, and then a discussion on how to link these different concepts will follow. In the last part of the paper, this theoretical perspective will be applied to a field which is familiar to the author, that of Islamic archaeology. A case example of the author’s research in the Vega of Granada (southeast Spain) will be brought to the fore. This part of the paper will show how the theoretical discussion developed above can contribute to solve one of the core questions of this field, that of the definition of an Islamic culture and its application to understand the daily life of people living within it
Prevalence and genetic characteristics of Staphylococcus aureus CC398 isolates from invasive infections in spanish hospitals, focusing on the livestock-independent CC398-MSSA clade
Background: Livestock-associated (LA)-CC398-MRSA is closely related to pigs, being unfrequently detected in human invasive infections. CC398-MSSA is emerging in human invasive infections in some countries, but genetic and epidemiological characteristics are still scarcely reported.
Objectives: To determine the prevalence of Staphylococcus aureus (SA) CC398, both MRSA and MSSA, among blood cultures SA isolates recovered in Spanish hospitals located in regions with different pig-farming densities (PD) and characterize the recovered isolates.
Methods: One thousand twenty-two SA isolates (761 MSSA, 261 MRSA) recovered from blood cultures during 6–12 months in 17 Spanish hospitals (2018–2019) were studied. CC398 lineage identification, detection of spa-types, and antibiotic resistance, virulence and human immune evasion cluster (IEC) genes were analyzed by PCR/sequencing.
Results: Forty-four CC398-MSSA isolates (4.3% of SA; 5.8% of MSSA) and 10 CC398-MRSA isolates (1% of SA; 3.8% of MRSA) were detected. Eleven spa-types were found among the CC398-MSSA isolates with t571 and t1451 the most frequent spa-types detected (75%). Most of CC398-MSSA isolates were Immune-Evasion-Cluster (IEC)-positive (88.6%), tetracycline-susceptible (95.5%) and erythromycin/clindamycin–inducible-resistant/erm(T)-positive (75%). No statistical significance was detected when the CC398-MSSA/MSSA rate was correlated to PD (pigs/km2) (p = 0.108). On the contrary, CC398-MRSA isolates were all IEC-negative, predominately spa-t011 (70%), and the CC398-MRSA/MRSA rate was significantly associated to PD (p < 0.005).
Conclusion: CC398-MSSA is an emerging clade in invasive infections in Spanish hospitals. CC398-MRSA (mostly t011) and CC398-MSSA (mostly t571 and t1451) show important differences, possibly suggesting divergent steps in host-adaptation evolutionary processes. While CC398-MRSA is livestock-associated (lacking IEC-system), CC398-MSSA seems to be mostly livestock-independent, carrying human-adaptation markers.
Whole-genome characterisation of Escherichia coli isolates from patients with bacteraemia presenting with sepsis or septic shock in Spain: a multicentre cross-sectional study
Background: Escherichia coli is the most frequent cause of bloodstream infections (BSIs). About one-third of patients with BSIs due to E coli develop sepsis or shock. The objective of this study is to characterise the microbiological features of E coli blood isolates causing sepsis or septic shock to provide exploratory information for future diagnostic, preventive, or therapeutic interventions. Methods: E coli blood isolates from a multicentre cross-sectional study of patients older than 14 years presenting with sepsis or septic shock (according to the Third International Consensus Definitions for Sepsis and Septic Shock criteria) from hospitals in Spain between Oct 4, 2016, and Oct 15, 2017, were studied by whole-genome sequencing. Phylogroups, sequence types (STs), serotype, FimH types, antimicrobial resistance (AMR) genes, pathogenicity islands, and virulence factors were identified. Susceptibility testing was performed by broth microdilution. The main outcome of this study was the characterisation of the E coli blood isolates in terms of population structure by phylogroups, groups (group 1: phylogroups B2, F, and G; group 2: A, B1, and C; group 3: D), and STs and distribution by geographical location and bloodstream infection source. Other outcomes were virulence score and prevalence of virulence-associated genes, pathogenicity islands, AMR, and AMR-associated genes. Frequencies were compared using χ² or Fisher's exact tests, and continuous variables using the Mann-Whitney test, with Bonferroni correction for multiple comparisons. Findings: We analysed 224 isolates: 140 isolates (63%) were included in phylogenetic group 1, 52 (23%) in group 2, and 32 (14%) in group 3. 85 STs were identified, with four comprising 44% (n=98) of the isolates: ST131 (38 [17%]), ST73 (25 [11%]), ST69 (23 [10%]), and ST95 (12 [5%]). No significant differences in phylogroup or ST distribution were found according to geographical areas or source of bloodstream infection, except for ST95, which was more frequent in urinary tract infections than in other sources (11 [9%] of 116 vs 1 [1%] of 108, p=0·0045). Median virulence score was higher in group 1 (median 25·0 [IQR 20·5–29·0) than in group 2 (median 14·5 [9·0–20·0]; p<0·0001) and group 3 (median 21 [16·5–23·0]; p<0·0001); prevalence of several pathogenicity islands was higher in group 1. No significant differences were found between phylogenetic groups in proportions of resistance to antibiotics. ST73 had higher median virulence score (32 [IQR 29–35]) than the other predominant clones (median range 21–28). Some virulence genes and pathogenicity islands were significantly associated with each ST. ST131 isolates had higher prevalence of AMR and a higher proportion of AMR genes, notably blaCTX-M-15 and blaOXA-1. Interpretation: In this exploratory study, the population structure of E coli causing sepsis or shock was similar to previous studies that included all bacteraemic isolates. Virulence genes, pathogenicity islands, and AMR genes were not randomly distributed among phylogroups or STs. These results provide a comprehensive characterisation of invasive E coli isolates causing severe response syndrome. Future studies are required to determine the contribution of these microbiological factors to severe clinical presentation and worse outcomes in patients with E coli bloodstream infection. Funding: Instituto de Salud Carlos III
A genome-wide association study follow-up suggests a possible role for PPARG in systemic sclerosis susceptibility
Introduction:
A recent genome-wide association study (GWAS) comprising a French cohort of systemic sclerosis (SSc) reported several non-HLA single-nucleotide polymorphisms (SNPs) showing a nominal association in the discovery phase. We aimed to identify previously overlooked susceptibility variants by using a follow-up strategy.<p></p>
Methods:
Sixty-six non-HLA SNPs showing a P value <10-4 in the discovery phase of the French SSc GWAS were analyzed in the first step of this study, performing a meta-analysis that combined data from the two published SSc GWASs. A total of 2,921 SSc patients and 6,963 healthy controls were included in this first phase. Two SNPs, PPARG rs310746 and CHRNA9 rs6832151, were selected for genotyping in the replication cohort (1,068 SSc patients and 6,762 healthy controls) based on the results of the first step. Genotyping was performed by using TaqMan SNP genotyping assays.
Results:
We observed nominal associations for both PPARG rs310746 (PMH = 1.90 × 10-6, OR, 1.28) and CHRNA9 rs6832151 (PMH = 4.30 × 10-6, OR, 1.17) genetic variants with SSc in the first step of our study. In the replication phase, we observed a trend of association for PPARG rs310746 (P value = 0.066; OR, 1.17). The combined overall Mantel-Haenszel meta-analysis of all the cohorts included in the present study revealed that PPARG rs310746 remained associated with SSc with a nominal non-genome-wide significant P value (PMH = 5.00 × 10-7; OR, 1.25). No evidence of association was observed for CHRNA9 rs6832151 either in the replication phase or in the overall pooled analysis.<p></p>
Conclusion:
Our results suggest a role of PPARG gene in the development of SSc
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