A Common-Factor Approach for Multivariate Data Cleaning with an Application to Mars Phoenix Mission Data

Data quality is fundamentally important to ensure the reliability of data for stakeholders to make decisions. In real world applications, such as scientific exploration of extreme environments, it is unrealistic to require raw data collected to be perfect. As data miners, when it is infeasible to physically know the why and the how in order to clean up the data, we propose to seek the intrinsic structure of the signal to identify the common factors of multivariate data. Using our new data driven learning method, the common-factor data cleaning approach, we address an interdisciplinary challenge on multivariate data cleaning when complex external impacts appear to interfere with multiple data measurements. Existing data analyses typically process one signal measurement at a time without considering the associations among all signals. We analyze all signal measurements simultaneously to find the hidden common factors that drive all measurements to vary together, but not as a result of the true data measurements. We use common factors to reduce the variations in the data without changing the base mean level of the data to avoid altering the physical meaning.Comment: 12 pages, 10 figures, 1 tabl

Indigenous organic-oxidized fluid interactions in the Tissint Mars meteorite

Part of this work was supported by UK Space Agency Grant ST/N000560/1 and by internal funding by Tufts University and the School of Earth and Environmental Sciences at the University of St Andrews.The observed fall and rapid recovery of the Tissint Mars meteorite has provided minimally contaminated samples of the Martian surface. We report analyses of Tissint for organic compounds by pyrolysis-gas chromatography-mass spectrometry and for soluble salts by ion chromatography. Pyrolysis-gas chromatography-mass spectrometry analysis shows the presence of organic compounds similar to those in the Mars EETA79001 and Nakhla meteorites. The organic profile is dominated by aromatic hydrocarbons, including oxygen and nitrogen-containing aromatics, and sulfur-containing species including thiophenes. The soluble salts in Tissint are dominated by sulfate and various oxidation states of chlorine, including perchlorate. The organic compounds and salts in the soils from the Tissint recovery strewn field differ significantly from those found in Tissint suggesting minimal terrestrial contamination. Our results support the hypothesis that the soluble inorganic components of Tissint are most likely a result of indigenous fluid inclusion, thus providing a glimpse into the composition of early Martian fluids.Publisher PDFPeer reviewe

Habitability of the Phoenix landing site

Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/95488/1/jgre2706.pd

Possible physical and thermodynamical evidence for liquid water at the Phoenix landing site

Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/95444/1/jgre2665.pd

Microbial Hotspots in Lithic Macrohabitats Inferred from DNA Fractionation and Metagenomics in the Atacama Desert

The existence of microbial activity hotspots in temperate regions of Earth is driven by soil heterogeneities, especially the temporal and spatial availability of nutrients. Here we investigate whether microbial activity hotspots also exist in lithic microhabitats in one of the most arid regions of the world, the Atacama Desert in Chile. While previous studies evaluated the total DNA fraction to elucidate the microbial communities, we here for the first time use a DNA separation approach on lithic microhabitats, together with metagenomics and other analysis methods (i.e., ATP, PLFA, and metabolite analysis) to specifically gain insights on the living and potentially active microbial community. Our results show that hypolith colonized rocks are microbial hotspots in the desert environment. In contrast, our data do not support such a conclusion for gypsum crust and salt rockenvironments, because only limited microbial activity could be observed. The hypolith community is dominated by phototrophs, mostly Cyanobacteria and Chloroflexi, at both study sites. The gypsum crusts are dominated by methylotrophs and heterotrophic phototrophs, mostly Chloroflexi, and the salt rocks (halite nodules) by phototrophic and halotolerant endoliths, mostly Cyanobacteria and Archaea. The major environmental constraints in the organic-poor arid and hyperarid Atacama Desert are water availability and UV irradiation, allowing phototrophs and other extremophiles to play a key role in desert ecology