Fine-resolution mapping of microforms of a boreal bog using aerial images and waveform-recording LiDAR

Boreal bogs are important stores and sinks of atmospheric carbon whose surfaces are characterised by vegetation microforms. Efficient methods for monitoring their vegetation are needed because changes in vegetation composition lead to alteration in their function such as carbon gas exchange with the atmosphere. We investigated how airborne image and waveform-recording LiDAR data can be used for 3D mapping of microforms in an open bog which is a mosaic of pools, hummocks with a few stunted pines, hollows, intermediate surfaces and mud-bottom hollows. The proposed method operates on the bog surface, which is reconstructed using LiDAR. The vegetation was classified at 20 cm resolution. We hypothesised that LiDAR data describe surface topography, moisture and the presence and depth of field-layer vegetation and surface roughness; while multiple images capture the colours and texture of the vegetation, which are influenced by directional reflectance effects. We conclude that geometric LiDAR features are efficient predictors of microforms. LiDAR intensity and echo width were specific to moisture and surface roughness, respectively. Directional reflectance constituted 4-34 % of the variance in images and its form was linked to the presence of the field layer. Microform-specific directional reflectance patterns were deemed to be of marginal value in enhancing the classification, and RGB image features were inferior to LiDAR variables. Sensor fusion is an attractive option for fine-scale mapping of these habitats. We discuss the task and propose options for improving the methodology.Peer reviewe

Plant mediated methane efflux from a boreal peatland complex

Purpose Aerenchymous plants are an important control for methane efflux from peatlands to the atmosphere, providing a bypass from the anoxic peat and avoiding oxidation in the oxic peat. We aimed to quantify the drivers of aerenchymous peatland species methane transport and the importance of this process for ecosystem-scale methane efflux. Methods We measured seasonal and interspecies variation in methane transport rate per gram of plant dry mass at a boreal fen and bog, which were upscaled to ecosystem-scale plant methane transport. Results Methane transport rate was better explained by plant species, leaf greenness and area than by environmental variables. Leaves appeared to transport methane even after senescence. Contrary to our expectations, both methane transport rate and the proportion of plant transport were lower in the fen (with greater sedge cover) than in the bog site. At the fen and bog, average methane transport rate was 0.7 and 1.8 mg g(-1) d(-1), and the proportion of seasonally variable plant transport was 7-41% and 6-90%, respectively. Species-specific differences in methane transport rate were observed at the ecosystem-scale: Scheuchzeria palustris, which accounted for 16% of the aerenchymous leaf area in the fen and displayed the greatest methane transport rate, was responsible for 45% of the ecosystem-scale plant transport. Conclusion Our study showed that plant species influence the magnitude of ecosystem-scale methane emissions through their properties of methane transport. The identification and quantification of these properties could be the pivotal next step in predicting plant methane transport in peatlands.Peer reviewe

Interacting effects of vegetation components and water level on methane dynamics in a boreal fen

Vegetation and hydrology are important controlling factors in peatland methane dynamics. This study aimed at investigating the role of vegetation components, sedges, dwarf shrubs, and Sphagnum mosses, in methane fluxes of a boreal fen under natural and experimental water level draw-down conditions. We measured the fluxes during growing seasons 2001-2004 using the static chamber technique in a field experiment where the role of the ecosystem components was assessed via plant removal treatments. The first year was a calibration year after which the water level draw-down and vegetation removal treatments were applied. Under natural water level conditions, plant-mediated fluxes comprised 68%-78% of the mean growing season flux (1:73 +/- 0:17 gCH(4) m(-2) month 1 from June to September), of which Sphagnum mosses and sedges accounted for one-fourth and three-fourths, respectively. The presence of dwarf shrubs, on the other hand, had a slightly attenuating effect on the fluxes. In water level drawdown conditions, the mean flux was close to zero (0:03 +/- 0:03 gCH(4) m(-2) month(-1)) and the presence and absence of the plant groups had a negligible effect. In conclusion, water level acted as a switch; only in natural water level conditions did vegetation regulate the net fluxes. The results are relevant for assessing the response of fen peatland fluxes to changing climatic conditions, as water level drawdown and the consequent vegetation succession are the major projected impacts of climate change on northern peatlands.Peer reviewe

Multi-year methane ebullition measurements from water and bare peat surfaces of a patterned boreal bog

We measured methane ebullition from a patterned boreal bog situated in the Siikaneva wetland complex in southern Finland. Measurements were conducted on water (W) and bare peat surfaces (BP) in three growing seasons (2014-2016) using floating gas traps. The volume of the trapped gas was measured weekly, and methane and carbon dioxide (CO2) concentrations of bubbles were analysed from fresh bubble samples that were collected separately. We applied a mixed-effect model to quantify the effect of the environmental controlling factors on the ebullition. Ebullition was higher from W than from BP, and more bubbles were released from open water (OW) than from the water's edge (EW). On average, ebullition rate was the highest in the wettest year ( 2016) and ranged between 0 and 253 mg m(-2) d(-1) with a median of 2 mg m(-2) d(-1), 0 and 147 mg m(-2) d(-1) with a median of 3 mg m(-2) d(-1), and 0 and 186 mg m(-2) d(-1) with a median of 28 mg m(-2) d(-1) in 2014, 2015, and 2016, respectively. Ebullition increased together with increasing peat temperature, weekly air temperature sum and atmospheric pressure, and decreasing water table (WT). Methane concentration in the bubbles released from W was 15-20 times higher than the CO2 concentration, and from BP it was 10 times higher. The proportion of ebullition fluxes upscaled to ecosystem level for the peak season was 2 %-8 % and 2 %- 5 % of the total flux measured with eddy covariance technique and with chambers and gas traps, respectively. Thus, the contribution of methane ebullition from wet non-vegetated surfaces of the bog to the total ecosystem-scale methane emission appeared to be small.Peer reviewe

Varying Vegetation Composition, Respiration and Photosynthesis Decrease Temporal Variability of the CO2 Sink in a Boreal Bog

We quantified the role of spatially varying vegetation composition in seasonal and interannual changes in a boreal bog’s CO2 uptake. We divided the spatially heterogeneous site into six microform classes based on plant species composition and measured their net ecosystem exchange (NEE) using chamber method over the growing seasons in 2012–2014. A nonlinear mixed-effects model was applied to assess how the contributions of microforms with different vegetation change temporally, and to upscale NEE to the ecosystem level to be compared with eddy covariance (EC) measurements. Both ecosystem respiration (R) and gross photosynthesis (PG) were the largest in high hummocks, 894–964 (R) and 969–1132 (PG) g CO2 m−2 growing season−1, and decreased toward the wetter microforms. NEE had a different spatial pattern than R and PG; the highest cumulative seasonal CO2 sink was found in lawns in all years (165–353 g CO2 m−2). Microforms with similar wetness but distinct vegetation had different NEE, highlighting the importance of vegetation composition in regulating CO2 sink. Chamber-based ecosystem-level NEE was smaller and varied less interannually than the EC-derived estimate, indicating a need for further research on the error sources of both methods. Lawns contributed more to ecosystem-level NEE (55–78%) than their areal cover within the site (21.5%). In spring and autumn, lawns had the highest NEE, whereas in midsummer differences among microforms were small. The contributions of all microforms to the ecosystem-level NEE varied seasonally and interannually, suggesting that spatially heterogeneous vegetation composition could make bog CO2 uptake temporally more stable.Peer reviewe

Boreal bog plant communities along a water table gradient differ in their standing biomass but not their biomass production

Question: Peatlands are globally important for carbon storage due to the imbalance between plant biomass production and decomposition. Distribution of both live standing biomass (BM, dry mass g/m(2)) and biomass production (BMP, dry mass gm(-2) growing season(-1)) are known to be dependent on the water table (WT). However, the relations of BM and BMP to WT variation are poorly known. Here we investigated, how the above- and below-ground BM and BMP of three different plant functional types (PFTs), dwarf shrubs, sedges and Sphagnum mosses, relate to natural WT variation within an ombrotrophic boreal bog. In addition, we estimated ecosystem-level BMP and compared that with ecosystem net primary production (NPP) derived from eddy covariance (EC) measurements. Location: Siikaneva bog, Ruovesi, Finland. Methods: We quantified above- and below-ground BM and BMP of PFTs along the WT gradient, divided into six plant community types. Plant community scale BM and BMP were up-scaled to the ecosystem level. NPP was derived from EC measurements using a literature-based ratio of heterotrophic respiration to total ecosystem respiration. Results: BM varied from 211 to 979 g/m(2) among the plant community types, decreasing gradually from dry to wet community types. In contrast, BMP was similar between plant community types (162-216 g/m(2)), except on nearly vegetation-free bare peat surfaces where it was low (38 g/m(2)). Vascular plant BM turnover rate (BMP:BM, per year) varied from 0.14 to 0.30 among the plant community types, being highest in sedge-dominated hollows. On average 56% of the vascular BM was produced below ground. Mosses, when present, produced on average 31% of the total BM, ranging from 16% to 53% depending on community type. EC-derived NPP was higher than measured BMP due to underestimation of certain components. Conclusions: We found that the diversity of PFTs decreases the spatial variability in productivity of a boreal bog ecosystem. The observed even distribution of BMP resulted from different WT optima and BMP:BM of dwarf shrubs, sedges and Sphagnum species. These differences in biomass turnover rate and species responses to environmental conditions may provide a resilience mechanism for bog ecosystems in changing conditions.Peer reviewe

Small spatial variability in methane emission measured from a wet patterned boreal bog

We measured methane fluxes of a patterned bog situated in Siikaneva in southern Finland from six different plant community types in three growing seasons (2012-2014) using the static chamber method with chamber exposure of 35 min. A mixed-effects model was applied to quantify the effect of the controlling factors on the methane flux. The plant community types differed from each other in their water level, species composition, total leaf area (LAI(TOT)) and leaf area of aerenchymatous plant species (LAI(AER)). Methane emissions ranged from -309 to 1254 mg m(-2) d(-1). Although methane fluxes increased with increasing peat temperature, LAI(TOT) and LAI(AER), they had no correlation with water table or with plant community type. The only exception was higher fluxes from hummocks and high lawns than from high hummocks and bare peat surfaces in 2013 and from bare peat surfaces than from high hummocks in 2014. Chamber fluxes upscaled to ecosystem level for the peak season were of the same magnitude as the fluxes measured with the eddy covariance (EC) technique. In 2012 and in August 2014 there was a good agreement between the two methods; in 2013 and in July 2014, the chamber fluxes were higher than the EC fluxes. Net fluxes to soil, indicating higher methane oxidation than production, were detected every year and in all community types. Our results underline the importance of both LAI(AER) and LAI(TOT) in controlling methane fluxes and indicate the need for automatized chambers to reliably capture localized events to support the more robust EC method.Peer reviewe

Species-specific temporal variation in photosynthesis as a moderator of peatland carbon sequestration

In boreal bogs plant species are low in number, but they differ greatly in their growth forms and photosynthetic properties. We assessed how ecosystem carbon (C) sink dynamics were affected by seasonal variations in the photosynthetic rate and leaf area of different species. Photosynthetic properties (light response parameters), leaf area development and areal cover (abundance) of the species were used to quantify species-specific net and gross photosynthesis rates (P-N and P-G, respectively), which were summed to express ecosystem-level P-N and P-G. The ecosystem-level P-G was compared with a gross primary production (GPP) estimate derived from eddy covariance (EC) measurements. Species areal cover, rather than differences in photosynthetic properties, determined the species with the highest P-G of both vascular plants and Sphagna. Species-specific contributions to the ecosystem P-G varied over the growing season, which, in turn, determined the seasonal variation in ecosystem P-G. The upscaled growing season P-G estimate, 230 gCm (-2), agreed well with the GPP estimated by the EC (243 gCm (-2)). Sphagna were superior to vascular plants in ecosystemlevel P-G throughout the growing season but had a lower P-N. P-N results indicated that areal cover of the species, together with their differences in photosynthetic parameters, shape the ecosystem-level C balance. Species with low areal cover but high photosynthetic efficiency appear to be potentially important for the ecosystem C sink. Results imply that func-tional diversity, i. e., the presence of plant groups with different seasonal timing and efficiency of photosynthesis, may increase the stability of C sinks of boreal bogs.Peer reviewe

Relationship between aerodynamic roughness length and bulk sedge leaf area index in a mixed-species boreal mire complex

Leaf area index (LAI) is an important parameter in natural ecosystems, representing the seasonal development of vegetation and photosynthetic potential. However, direct measurement techniques require labor-intensive field campaigns that are usually limited in time, while remote sensing approaches often do not yield reliable estimates. Here we propose that the bulk LAI of sedges (LAI(s)) can be estimated alternatively from a micrometeorological parameter, the aerodynamic roughness length for momentum (z(0)). z(0) can be readily calculated from high-response turbulence and other meteorological data, typically measured continuously and routinely available at ecosystem research sites. The regressions of LAI versus z(0) were obtained using the data from two Finnish natural sites representative of boreal fen and bog ecosystems. LAI(s) was found to be well correlated with z(0) and sedge canopy height. Superior method performance was demonstrated in the fen ecosystem where the sedges make a bigger contribution to overall surface roughness than in bogs.Peer reviewe

Warming impacts on boreal fen CO2 exchange under wet and dry conditions

Abstract Northern peatlands form a major soil carbon (C) stock. With climate change, peatland C mineralization is expected to increase, which in turn would accelerate climate change. A particularity of peatlands is the importance of soil aeration, which regulates peatland functioning and likely modulates the responses to warming climate. Our aim is to assess the impacts of warming on a southern boreal and a sub-arctic sedge fen carbon dioxide (CO2) exchange under two plausible water table regimes: wet and moderately dry. We focused this study on minerotrophic treeless sedge fens, as they are common peatland types at boreal and (sub)arctic areas, which are expected to face the highest rates of climate warming. In addition, fens are expected to respond to environmental changes faster than the nutrient poor bogs. Our study confirmed that CO2 exchange is more strongly affected by drying than warming. Experimental water level draw-down (WLD) significantly increased gross photosynthesis and ecosystem respiration. Warming alone had insignificant impacts on the CO2 exchange components, but when combined with WLD it further increased ecosystem respiration. In the southern fen, CO2 uptake decreased due to WLD, which was amplified by warming, while at northern fen it remained stable. As a conclusion, our results suggest that a very small difference in the WLD may be decisive, whether the C sink of a fen decreases, or whether the system is able to adapt within its regime and maintain its functions. Moreover, the water table has a role in determining how much the increased temperature impacts the CO2 exchange. This article is protected by copyright. All rights reserved.Peer reviewe