310 research outputs found
Critical Current of the Spin-Triplet Superconducting Phase in SrRuO
There have been two different proposals for the spin-triplet order parameter
of the superconducting phase in SrRuO; an -wave order parameter and
the multigap model where some of the bands have the line node. In an effort to
propose an experiment that can distinguish two cases, we study the behavior of
the supercurrent and compute the critical current for these order parameters
when the sample is a thin film with the thickness where is
the coherence length. It is found that the supercurrent behaves very
differently in two models. This will serve as a sharp test for the
identification of the correct order parameter.Comment: 4 pages, 1 figur
Supercurrent in Nodal Superconductors
In recent years, a number of nodal superconductors have been identified;
d-wave superconductors in high T_c cuprates, CeCoIn, and
\kappa-(ET)_2Cu(NCS)_2, 2D f-wave superconductor in Sr_2RuO_4 and hybrid
s+g-wave superconductor in YNi_2B_2C. In this work we conduct a theoretical
study of nodal superconductors in the presence of supercurrent. For simplicity,
we limit ourselves to d-wave and 2D f-wave superconductors. We compute the
quasiparticle density of states and the temperature dependence of the depairing
critical current in nodal superconductors, both of which are accessible
experimentally.Comment: revtex4, 6 pages, 7 figures; fixed typos, updated references, trimmed
introductio
Camera for QUasars in EArly uNiverse (CQUEAN)
We describe the overall characteristics and the performance of an optical CCD
camera system, Camera for QUasars in EArly uNiverse (CQUEAN), which is being
used at the 2.1 m Otto Struve Telescope of the McDonald Observatory since 2010
August. CQUEAN was developed for follow-up imaging observations of red sources
such as high redshift quasar candidates (z >= 5), Gamma Ray Bursts, brown
dwarfs, and young stellar objects. For efficient observations of the red
objects, CQUEAN has a science camera with a deep depletion CCD chip which
boasts a higher quantum efficiency at 0.7 - 1.1 um than conventional CCD chips.
The camera was developed in a short time scale (~ one year), and has been
working reliably. By employing an auto-guiding system and a focal reducer to
enhance the field of view on the classical Cassegrain focus, we achieve a
stable guiding in 20 minute exposures, an imaging quality with FWHM >= 0.6"
over the whole field (4.8' * 4.8'), and a limiting magnitude of z = 23.4 AB mag
at 5-sigma with one hour total integration time.Comment: Accepted for publication in PASP. 26 pages including 5 tables and 24
figure
Raman Spectra of Triplet Superconductor in SrRuO
We study the Raman spectra of spin-triplet superconductors in SrRuO.
The p-wave and f-wave symmetries are considered. We show that there is the
clapping mode with frequency of and for
p-wave and f-wave superconductors, respectively. This mode is visible as a huge
resonance in the B1g and B2g modes of Raman spectra. We discuss the details of
the Raman spectra in these superconducting states.Comment: 5 pages, 3 figure
Disseminated Mycobacterium avium complex infection in an immunocompetent pregnant woman
BACKGROUND: Disseminated mycobacterium avium complex (MAC) occurs mainly in immunocompromised hosts, which is associated with abnormal cellular immunity. CASE PRESENTATION: A 26-year-old pregnant woman presented with fever and general weakness. Miliary lung nodules were noted on chest X-ray. Under the impression of miliary tuberculosis, anti-tuberculosis medication was administered. However, the patient was not improved. Further work-up demonstrated MAC in the sputum and placenta. The patient was treated successfully with clarithromycin-based combination regimen. CONCLUSION: This appears to be the first case of disseminated MAC in an otherwise healthy pregnant woman. Clinicians should be alert for the diagnosis of MAC infection in diverse clinical conditions
Germline breast cancer susceptibility genes, tumor characteristics, and survival.
BACKGROUND: Mutations in certain genes are known to increase breast cancer risk. We study the relevance of rare protein-truncating variants (PTVs) that may result in loss-of-function in breast cancer susceptibility genes on tumor characteristics and survival in 8852 breast cancer patients of Asian descent. METHODS: Gene panel sequencing was performed for 34 known or suspected breast cancer predisposition genes, of which nine genes (ATM, BRCA1, BRCA2, CHEK2, PALB2, BARD1, RAD51C, RAD51D, and TP53) were associated with breast cancer risk. Associations between PTV carriership in one or more genes and tumor characteristics were examined using multinomial logistic regression. Ten-year overall survival was estimated using Cox regression models in 6477 breast cancer patients after excluding older patients (≥75years) and stage 0 and IV disease. RESULTS: PTV9genes carriership (n = 690) was significantly associated (p < 0.001) with more aggressive tumor characteristics including high grade (poorly vs well-differentiated, odds ratio [95% confidence interval] 3.48 [2.35-5.17], moderately vs well-differentiated 2.33 [1.56-3.49]), as well as luminal B [HER-] and triple-negative subtypes (vs luminal A 2.15 [1.58-2.92] and 2.85 [2.17-3.73], respectively), adjusted for age at diagnosis, study, and ethnicity. Associations with grade and luminal B [HER2-] subtype remained significant after excluding BRCA1/2 carriers. PTV25genes carriership (n = 289, excluding carriers of the nine genes associated with breast cancer) was not associated with tumor characteristics. However, PTV25genes carriership, but not PTV9genes carriership, was suggested to be associated with worse 10-year overall survival (hazard ratio [CI] 1.63 [1.16-2.28]). CONCLUSIONS: PTV9genes carriership is associated with more aggressive tumors. Variants in other genes might be associated with the survival of breast cancer patients. The finding that PTV carriership is not just associated with higher breast cancer risk, but also more severe and fatal forms of the disease, suggests that genetic testing has the potential to provide additional health information and help healthy individuals make screening decisions
Cross-National Differences in Victimization : Disentangling the Impact of Composition and Context
Varying rates of criminal victimization across countries are assumed to be the outcome of countrylevel structural constraints that determine the supply ofmotivated o¡enders, as well as the differential composition within countries of suitable targets and capable guardianship. However, previous empirical tests of these ‘compositional’ and ‘contextual’ explanations of cross-national di¡erences
have been performed upon macro-level crime data due to the unavailability of comparable individual-level data across countries. This limitation has had two important consequences for cross-national crime research. First, micro-/meso-level mechanisms underlying cross-national differences cannot be truly inferred from macro-level data. Secondly, the e¡ects of contextual measures (e.g. income inequality) on crime are uncontrolled for compositional heterogeneity. In this
paper, these limitations are overcome by analysing individual-level victimization data across 18 countries from the International CrimeVictims Survey. Results from multi-level analyses on theft and violent victimization indicate that the national level of income inequality is positively related to risk, independent of compositional (i.e. micro- and meso-level) di¡erences. Furthermore, crossnational variation in victimization rates is not only shaped by di¡erences in national context, but
also by varying composition. More speci¢cally, countries had higher crime rates the more they consisted of urban residents and regions with lowaverage social cohesion.
Pharmacogenomic profiling reveals molecular features of chemotherapy resistance in IDH wild-type primary glioblastoma
Background
Although temozolomide (TMZ) has been used as a standard adjuvant chemotherapeutic agent for primary glioblastoma (GBM), treating isocitrate dehydrogenase wild-type (IDH-wt) cases remains challenging due to intrinsic and acquired drug resistance. Therefore, elucidation of the molecular mechanisms of TMZ resistance is critical for its precision application.
Methods
We stratified 69 primary IDH-wt GBM patients into TMZ-resistant (n = 29) and sensitive (n = 40) groups, using TMZ screening of the corresponding patient-derived glioma stem-like cells (GSCs). Genomic and transcriptomic features were then examined to identify TMZ-associated molecular alterations. Subsequently, we developed a machine learning (ML) model to predict TMZ response from combined signatures. Moreover, TMZ response in multisector samples (52 tumor sectors from 18 cases) was evaluated to validate findings and investigate the impact of intra-tumoral heterogeneity on TMZ efficacy.
Results
In vitro TMZ sensitivity of patient-derived GSCs classified patients into groups with different survival outcomes (P = 1.12e−4 for progression-free survival (PFS) and 3.63e−4 for overall survival (OS)). Moreover, we found that elevated gene expression of EGR4, PAPPA, LRRC3, and ANXA3 was associated to intrinsic TMZ resistance. In addition, other features such as 5-aminolevulinic acid negative, mesenchymal/proneural expression subtypes, and hypermutation phenomena were prone to promote TMZ resistance. In contrast, concurrent copy-number-alteration in PTEN, EGFR, and CDKN2A/B was more frequent in TMZ-sensitive samples (Fishers exact P = 0.0102), subsequently consolidated by multi-sector sequencing analyses. Integrating all features, we trained a ML tool to segregate TMZ-resistant and sensitive groups. Notably, our method segregated IDH-wt GBM patients from The Cancer Genome Atlas (TCGA) into two groups with divergent survival outcomes (P = 4.58e−4 for PFS and 3.66e−4 for OS). Furthermore, we showed a highly heterogeneous TMZ-response pattern within each GBM patient usingin vitro TMZ screening and genomic characterization of multisector GSCs. Lastly, the prediction model that evaluates the TMZ efficacy for primary IDH-wt GBMs was developed into a webserver for public usage (http://www.wang-lab-hkust.com:3838/TMZEP)
Conclusions
We identified molecular characteristics associated to TMZ sensitivity, and illustrate the potential clinical value of a ML model trained from pharmacogenomic profiling of patient-derived GSC against IDH-wt GBMs
ATOMS : ALMA Three-millimeter Observations of Massive Star-forming regions - XI. From inflow to infall in hub-filament systems
We investigate the presence of hub-filament systems in a large sample of 146 active proto-clusters, using (HCO+)-C-13 J = 1-0 molecular line data obtained from the ATOMS survey. We find that filaments are ubiquitous in proto-clusters, and hub-filament systems are very common from dense core scales (similar to 0.1 pc) to clump/cloud scales (similar to 1-10 pc). The proportion of proto-clusters containing hub-filament systems decreases with increasing dust temperature (T-d) and luminosity-to-mass ratios (L/M) of clumps, indicating that stellar feedback from H ii regions gradually destroys the hub-filament systems as proto-clusters evolve. Clear velocity gradients are seen along the longest filaments with a mean velocity gradient of 8.71 km s(-1) pc(-1) and a median velocity gradient of 5.54 km s(-1) pc(-1). We find that velocity gradients are small for filament lengths larger than similar to 1 pc, probably hinting at the existence of inertial inflows, although we cannot determine whether the latter are driven by large-scale turbulence or large-scale gravitational contraction. In contrast, velocity gradients below similar to 1 pc dramatically increase as filament lengths decrease, indicating that the gravity of the hubs or cores starts to dominate gas infall at small scales. We suggest that self-similar hub-filament systems and filamentary accretion at all scales may play a key role in high-mass star formation.Peer reviewe
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