Ras p21 protein promotes survival and fiber outgrowth of cultured embryonic neurons

Although evidence obtained with the PC12 cell line has suggested a role for the ras oncogene proteins in the signal transduction of nerve growth factor-mediated fiber outgrowth, little is known about the signal transduction mechanisms involved in the neuronal response to neurotrophic factors in nontransformed cells. We report here that the oncogene protein T24-ras, when introduced into the cytoplasm of freshly dissociated chick embryonic neurons, promotes the in vitro survival and neurite outgrowth of nerve growth factor-responsive dorsal root ganglion neurons, brain-derived neurotrophic factor-responsive nodose ganglion neurons, and ciliary neuronotrophic factor-responsive ciliary ganglion neurons. The proto-oncogene product c-Ha-ras also promotes neuronal survival, albeit less strongly. No effect could be observed with truncated counterparts of T24-ras and c-Ha-ras lacking the 23 C-terminal amino acids including the membrane-anchoring, palmityl-accepting cysteine. These results suggest a generalized involvement of ras or ras-like proteins in the intracellular signal transduction pathway for neurotrophic factors

Multi-standards metadata cataloguing tools for Ocean Observatories

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Safeguarding, Integrating and Disseminating Knowledge on Exploited Marine Ecosystems: the Ecoscope

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Gastric Antral Web in a 103-Year-Old Patient

Copyright © 2011 Waheed Gul et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. 1

COASTAL MAPPING AND KITESURFING

Collecting data on aquatic biodiversity is very challenging because of the difficulty to access underwater ecosystems. Over the years, field surveys have become easier and cheaper with the development of low cost electronics. Commercial and recreational vessels, including sailboats, can now substantially complement expensive scientific surveys and arrays of observation buoys deployed across the world oceans (Pesant et al., 2015, Karsenti et al., 2011). Meanwhile, a large variety of marine animals such as birds, mammals, and fish have become data collection platforms for both biological and environmental parameters through the advent of archival tags. It becomes obvious that data collection in coastal and high seas will become more popular and that citizen will play a growing role in acquiring information on ocean dynamics (physical, chemical and biological parameters). However, currently, very few attempts have been made to use Human beings as observation platforms. In this paper we describe large datasets (more than 200,000 pictures) that have been recently collected along the coast of Mauritius by using popular and cheap platforms such as kite surf and Stand Up Paddle. We describe the characteristics of the data collected and showcase how they can be geolocated and used to complement remote sensing and mapping in order to drastically extend the current scope of “old school” fieldwork. We point out some of the main limitations encountered which need to be addressed to foster this citizen science approach such as data storage and transmission, deep learning to automate image recognition. The methods are all based on open source softwares

Studying monogenetic volcanoes with a Terrestrial Laser Scanner: Case study at Croscat volcano (Garrotxa Volcanic Field, Spain)

Erosional processes (natural or anthropogenic) may partly destroy the relatively small-sized volcanic edifices characteristic of monogenetic volcanic zones, leaving their internal structure well exposed. Nevertheless, the study of these outcrops may be extremely challenging due to restricted accessibility or safety issues. Digital representations of the outcrop surface have been lately used to overcome such difficulties. Data acquired with terrestrial laser scanning instruments using Light Detection and Ranging technology enables the construction of such digital outcrops. The obtained high-precision 3-D terrain models are of greater coverage and accuracy than conventional methods and, when taken at different times, allow description of geological processes in time and space. Despite its intrinsic advantages and the proven satisfactory results, this technique has been little applied in volcanology-related studies. Here, we want to introduce it to the volcanological community together with a new and user-friendly digital outcrop analysis methodology for inexperienced users. This tool may be useful, not only for volcano monitoring purposes, but also to describe the internal structure of exposed volcanic edifices or to estimate outcrop erosion rates that may be helpful in terms of hazard assessment or preservation of volcanic landscapes. We apply it to the Croscat volcano, a monogenetic cone in the La Garrotxa Volcanic Field (Catalan Volcanic Zone, NE Spain), quarrying of which leads to a perfect view of its interior but restricts access to its uppermost parts. Croscat is additionally one of the most emblematic symbols of the La Garrotxa Volcanic Field Natural Park, and its preservation is a main target of the park administration

A KRAB/KAP1-miRNA Cascade Regulates Erythropoiesis Through Stage-Specific Control of Mitophagy

During hematopoiesis, lineage- and stage-specific transcription factors work in concert with chromatin modifiers to direct the differentiation of all blood cells. We explored the role of KRAB-containing zinc finger proteins (KRAB-ZFPs) and their cofactor KAP1 in this process. In mice, hematopoietic-restricted deletion of Kap1 resulted in severe hypoproliferative anemia. Kap1-deleted erythroblasts failed to induce mitophagy-associated genes and retained mitochondria. This was due to persistent expression of microRNAs (miRNAs) targeting mitophagy transcripts, itself secondary to a lack of repression by stage-specific KRAB-ZFPs. The KRAB/KAP1-miRNA regulatory cascade is evolutionarily conserved, as it also controls mitophagy during human erythropoiesis. Thus, a multilayered transcription regulatory system is present, in which protein- and RNA-based repressors are superimposed in combinatorial fashion to govern the timely triggering of an important differentiation event

Hydrogeology of Stromboli volcano, Aeolian Islands (Italy) from the interpretation of resistivity tomograms, self-potential, soil temperature and soil CO2 concentration measurements

International audienceTo gain a better insight of the hydrogeology and the location of the main tectonic faults of Stromboli volcano in Italy, we collected electrical resistivity measurements, soil CO2 concentrations, temperature and self-potential measurements along two profiles. These two profiles started at the village of Ginostra in the southwest part of the island. The first profile (4.8 km in length) ended up at the village of Scari in the north east part of the volcano and the second one (3.5 km in length) at Forgia Vecchia beach, in the eastern part of the island. These data were used to provide insights regarding the position of shallow aquifers and the extension of the hydrothermal system. This large-scale study is complemented by two high-resolution studies, one at the Pizzo area (near the active vents) and one at Rina Grande where flank collapse areas can be observed. The Pizzo corresponds to one of the main degassing structure of the hydrothermal system. The main degassing area is localized along a higher permeability area corresponding to the head of the gliding plane of the Rina Grande sector collapse. We found that the self-potential data reveal the position of an aquifer above the villages of Scari and San Vincenzo. We provide an estimate of the depth of this aquifer from these data. The lateral extension of the hydrothermal system (resistivity ∼15-60 ohm m) is broader than anticipated extending in the direction of the villages of Scari and San Vincenzo (in agreement with temperature data recorded in shallow wells). The lateral extension of the hydrothermal system reaches the lower third of the Rina Grande sector collapse area in the eastern part of the island. The hydrothermal body in this area is blocked by an old collapse boundary. This position of the hydrothermal body is consistent with low values of the magnetization (<2.5 A m−1) from previously published work. The presence of the hydrothermal body below Rina Grande raises questions about the mechanical stability of this flank of the edifice

GEOAI FOR MARINE ECOSYSTEM MONITORING: A COMPLETE WORKFLOW TO GENERATE MAPS FROM AI MODEL PREDICTIONS

Mapping and monitoring marine ecosystems imply several challenges for data collection and processing: water depth, restricted access to locations, instrumentation costs or weather constraints for sampling, among others. Nowadays, Artificial Intelligence (AI) and Geographic Information System (GIS) open source software can be combined in new kinds of workflows, to annotate and predict objects directly on georeferenced raster data (e.g. orthomosaics). Here, we describe and share the code of a generic method to train a deep learning model with spatial annotations and use it to directly generate model predictions as spatial features. This workflow has been tested and validated in three use cases related to marine ecosystem monitoring at different geographic scales: (i) segmentation of corals on orthomosaics made of underwater images to automate coral reef habitats mapping, (ii) detection and classification of fishing vessels on remote sensing satellite imagery to estimate a proxy of fishing effort (iii) segmentation of marine species and habitats on underwater images with a simple geolocation. Models have been successfully trained and the models predictions are displayed with maps in the three use cases

Adventive hydrothermal circulation on Stromboli volcano (Aeolian Islands, Italy) revealed by geophysical and geochemical approaches: Implications for general fluid flow models on volcanoes

International audienceOn March 15th 2007 a paroxysmal explosion occurred at the Stromboli volcano. This event generated a large amount of products, mostly lithic blocks, some of which impacted the ground as far as down to 200 m a.s.l., about 1.5 km far away from the active vents. Two days after the explosion, a new vapour emission was discovered on the north-eastern flank of the volcanic edifice, at 560 m a.s.l., just above the area called "Nel Cannestrà". This new vapour emission was due to a block impact. In order to investigate the block impact area to understand the appearance of the vapour emission, we conducted on May 2008 a multidisciplinary study involving Electrical Resistivity Tomography (ERT), Ground Penetrating Radar (GPR), Self-Potential (SP), CO2 soil diffuse degassing and soil temperature surveys. This complementary data set revealed the presence of an anomalous conductive body, probably related to a shallow hydrothermal level, at about 10-15 m depth, more or less parallel to the topography. It is the first time that such a hydrothermal fluid flow, with a temperature close to the water boiling point (76 °C) has been evidenced at Stromboli at this low elevation on the flank of the edifice. The ERT results suggest a possible link between (1) the main central hydrothermal system of Stromboli, located just above the plumbing system feeding the active vents, with a maximum of subsurface soil temperature close to 90 °C and limited by the NeoStromboli summit crater boundary and (2) the investigated area of Nel Cannestrà, at ~ 500 m a.s.l., a buried eruptive fissure active 9 ka ago. In parallel, SP and CO2 soil diffuse degassing measurements suggest in this sector at slightly lower elevation from the block impact crater a magmatic and hydrothermal fluid rising system along the N41° regional fault. A complementary ERT profile, on May 2009, carried out from the NeoStromboli crater boundary down to the block impact crater displayed a flank fluid flow apparently connected to a deeper system. The concept of shallow hydrothermal level have been compared to similar ERT results recently obtained on Mount Etna and La Fossa cone of Vulcano. This information needs to be taken into account in general fluid flow models on volcanoes. In particular, peripheral thermal waters (as those bordering the north-eastern coast of Stromboli) could be contaminated by hydrothermal and magmatic fluids coming from regional faults but also from the summit