On the diffusive propagation of warps in thin accretion discs

In this paper we revisit the issue of the propagation of warps in thin and viscous accretion discs. In this regime warps are know to propagate diffusively, with a diffusion coefficient approximately inversely proportional to the disc viscosity. Previous numerical investigations of this problem (Lodato & Pringle 2007) did not find a good agreement between the numerical results and the predictions of the analytic theories of warp propagation, both in the linear and in the non-linear case. Here, we take advantage of a new, low-memory and highly efficient SPH code to run a large set of very high resolution simulations (up to 20 million SPH particles) of warp propagation, implementing an isotropic disc viscosity in different ways, to investigate the origin of the discrepancy between the theory and the numerical results. Our new and improved analysis now shows a remarkable agreement with the analytic theory both in the linear and in the non-linear regime, in terms of warp diffusion coefficient and precession rate. It is worth noting that the resulting diffusion coefficient is inversely proportional to the disc viscosity only for small amplitude warps and small values of the disc $\alpha$ coefficient ($\alpha < 0.1$). For non-linear warps, the diffusion coefficient is a function of both radius and time, and is significantly smaller than the standard value. Warped accretion discs are present in many contexts, from protostellar discs to accretion discs around supermassive black holes. In all such cases, the exact value of the warp diffusion coefficient may strongly affect the evolution of the system and therefore its careful evaluation is critical in order to correctly estimate the system dynamics (abridged).Comment: 16 pages, 14 figures. Accepted to MNRAS. Movies and additional figures can be found at http://users.monash.edu.au/~dprice/pubs/warp/index.htm

Smoothed Particle Hydrodynamics and Magnetohydrodynamics

This paper presents an overview and introduction to Smoothed Particle Hydrodynamics and Magnetohydrodynamics in theory and in practice. Firstly, we give a basic grounding in the fundamentals of SPH, showing how the equations of motion and energy can be self-consistently derived from the density estimate. We then show how to interpret these equations using the basic SPH interpolation formulae and highlight the subtle difference in approach between SPH and other particle methods. In doing so, we also critique several `urban myths' regarding SPH, in particular the idea that one can simply increase the `neighbour number' more slowly than the total number of particles in order to obtain convergence. We also discuss the origin of numerical instabilities such as the pairing and tensile instabilities. Finally, we give practical advice on how to resolve three of the main issues with SPMHD: removing the tensile instability, formulating dissipative terms for MHD shocks and enforcing the divergence constraint on the particles, and we give the current status of developments in this area. Accompanying the paper is the first public release of the NDSPMHD SPH code, a 1, 2 and 3 dimensional code designed as a testbed for SPH/SPMHD algorithms that can be used to test many of the ideas and used to run all of the numerical examples contained in the paper.Comment: 44 pages, 14 figures, accepted to special edition of J. Comp. Phys. on "Computational Plasma Physics". The ndspmhd code is available for download from http://users.monash.edu.au/~dprice/ndspmhd

Do native brown trout and non-native brook trout interact reproductively?

Reproductive interactions between native and non-native species of fish have received little attention compared to other types of interactions such as predation or competition for food and habitat. We studied the reproductive interactions between non-native brook trout (Salvelinus fontinalis) and native brown trout (Salmo trutta) in a Pyrenees Mountain stream (SW France). We found evidence of significant interspecific interactions owing to consistent spatial and temporal overlap in redd localizations and spawning periods. We observed mixed spawning groups composed of the two species, interspecific subordinate males, and presence of natural hybrids (tiger trout). These reproductive interactions could be detrimental to the reproduction success of both species. Our study shows that non-native species might have detrimental effects on native species via subtle hybridization behavior

Evaluation of the mRNA-1273 Vaccine against SARS-CoV-2 in Nonhuman Primates

Background: Vaccines to prevent coronavirus disease 2019 (Covid-19) are urgently needed. The effect of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) vaccines on viral replication in both upper and lower airways is important to evaluate in nonhuman primates. Methods: Nonhuman primates received 10 or 100 μg of mRNA-1273, a vaccine encoding the prefusion-stabilized spike protein of SARS-CoV-2, or no vaccine. Antibody and T-cell responses were assessed before upper- and lower-airway challenge with SARS-CoV-2. Active viral replication and viral genomes in bronchoalveolar-lavage (BAL) fluid and nasal swab specimens were assessed by polymerase chain reaction, and histopathological analysis and viral quantification were performed on lung-tissue specimens. Results: The mRNA-1273 vaccine candidate induced antibody levels exceeding those in human convalescent-phase serum, with live-virus reciprocal 50% inhibitory dilution (ID50) geometric mean titers of 501 in the 10-μg dose group and 3481 in the 100-μg dose group. Vaccination induced type 1 helper T-cell (Th1)-biased CD4 T-cell responses and low or undetectable Th2 or CD8 T-cell responses. Viral replication was not detectable in BAL fluid by day 2 after challenge in seven of eight animals in both vaccinated groups. No viral replication was detectable in the nose of any of the eight animals in the 100-μg dose group by day 2 after challenge, and limited inflammation or detectable viral genome or antigen was noted in lungs of animals in either vaccine group. Conclusions: Vaccination of nonhuman primates with mRNA-1273 induced robust SARS-CoV-2 neutralizing activity, rapid protection in the upper and lower airways, and no pathologic changes in the lung. (Funded by the National Institutes of Health and others.)

The Psalms: Places for remembering

The Psalms feature various landscapes: many different places are mentioned or described. These depictions of locales and buildings, whether in the superscriptions or the psalms themselves, have led form critics to argue for liturgical settings, contending that these hymns and songs inform today’s theologian of the Temple cult. Yet it is more complicated. Psalms scholarship has rarely considered that such landscapes should not always be taken literally. Historical biblical scholars have recognised that the places described within the Psalms could sometimes be recollections, and such interpretations hang on the difficulty of tense in Hebrew verse translation, particularly Qal forms. Such past depictions also relate to the difficulty of dating psalms, i. e. whether the Temple was standing or not. I suggest that it is possible that the landscapes described within the Psalms are inner landscapes, places of the mind’s eye, rather than physical localities experienced at the time of the performance of the text itself. Within geographicallyresonant texts of the Psalter, there are the places where remembering and prayer occur, and the places that are themselves remembered. The relationship of these depends on the complex nexus of prayer, imagination, memory, and place. I therefore begin by exploring these ideas.</p