2,185 research outputs found

    The second generation of optimized beam orbit measurement (BOM) system of LEP: hardware and performance description

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    The BOM System with its 504 Beam Position Monitors and 40 Processing Electronics Stations, distributed along the 27 km of the LEP tunnel, has been optimized for all beam conditions and modes of operation. The description of the Beam Position Monitors (or PU) behavior in the tunnel is given. The guiding approaches for obtaining both main aspects of the critical BOM performances were: a) high reliability, since most of the electronics is not accessible during operation, and b) resolution, precision and stability of the signal processing equipment for the management of the LEP optics, polarization and energy calibration. The finalized analog signal processing chains, both Wide-Band and Narrow-Band, are described. Since local memories allow for the recording of data at each bunch passage during more than 1000 revolutions, it can be followed by a powerful digital signal processing allowing for many modes of beam observation. Examples are presented of beam and machine behavior studies. The BOM System has been a key instrument for the success of LEP operation

    Crystal to Liquid-Crystal Transition Studied by Raman Scattering

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    Phase transitions of the nematic liquid crystal p-methoxy-benzylidine, p−n butyl-aniline were studied by recording the low-frequency Raman spectrum. The intensity of the lattice Raman bands undergoes abrupt change at the crystalline-to-nematic phase transition temperature, with an indication of a hysteresis. The band totally disappears at the isotropic (liquid) phase

    The effects of mismatches on hybridization in DNA microarrays: determination of nearest neighbor parameters

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    Quantifying interactions in DNA microarrays is of central importance for a better understanding of their functioning. Hybridization thermodynamics for nucleic acid strands in aqueous solution can be described by the so-called nearest-neighbor model, which estimates the hybridization free energy of a given sequence as a sum of dinucleotide terms. Compared with its solution counterparts, hybridization in DNA microarrays may be hindered due to the presence of a solid surface and of a high density of DNA strands. We present here a study aimed at the determination of hybridization free energies in DNA microarrays. Experiments are performed on custom Agilent slides. The solution contains a single oligonucleotide. The microarray contains spots with a perfect matching complementary sequence and other spots with one or two mismatches: in total 1006 different probe spots, each replicated 15 times per microarray. The free energy parameters are directly fitted from microarray data. The experiments demonstrate a clear correlation between hybridization free energies in the microarray and in solution. The experiments are fully consistent with the Langmuir model at low intensities, but show a clear deviation at intermediate (non-saturating) intensities. These results provide new interesting insights for the quantification of molecular interactions in DNA microarrays.Comment: 31 pages, 5 figure

    The functional role of biodiversity in ecosystems: incorporating trophic complexity

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    Understanding how biodiversity affects functioning of ecosystems requires integrating diversity within trophic levels (horizontal diversity) and across trophic levels (vertical diversity, including food chain length and omnivory). We review theoretical and experimental progress toward this goal. Generally, experiments show that biomass and resource use increase similarly with horizontal diversity of either producers or consumers. Among prey, higher diversity often increases resistance to predation, due to increased probability of including inedible species and reduced efficiency of specialist predators confronted with diverse prey. Among predators, changing diversity can cascade to affect plant biomass, but the strength and sign of this effect depend on the degree of omnivory and prey behaviour. Horizontal and vertical diversity also interact: adding a trophic level can qualitatively change diversity effects at adjacent levels. Multitrophic interactions produce a richer variety of diversity‐functioning relationships than the monotonic changes predicted for single trophic levels. This complexity depends on the degree of consumer dietary generalism, trade‐offs between competitive ability and resistance to predation, intraguild predation and openness to migration. Although complementarity and selection effects occur in both animals and plants, few studies have conclusively documented the mechanisms mediating diversity effects. Understanding how biodiversity affects functioning of complex ecosystems will benefit from integrating theory and experiments with simulations and network‐based approaches
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