Modeling potential masking of echolocating sperm whales exposed to continuous 1–2 kHz naval sonar

This study was sponsored by the U.S. Living Marine Resources program, Office of Naval Research (ONR) Grant Nos. N00014-18-1-2062 and N00014-20-1-2709, UK Defence Science and Technology Laboratory (DSTL), French Direction générale de l'armement (DGA), and the Netherlands Ministry of Defence.Modern active sonar systems can (almost) continuously transmit and receive sound, which can lead to more masking of important sounds for marine mammals than conventional pulsed sonar systems transmitting at a much lower duty cycle. This study investigated the potential of 1–2 kHz active sonar to mask echolocation-based foraging of sperm whales by modeling their echolocation detection process. Continuous masking for an echolocating sperm whale facing a sonar was predicted for sonar sound pressure levels of 160 dB re 1 μPa2, with intermittent masking at levels of 120 dB re 1 μPa2, but model predictions strongly depended on the animal orientation, harmonic content of the sonar, click source level, and target strength of the prey. The masking model predicted lower masking potential of buzz clicks compared to regular clicks, even though the energy source level is much lower. For buzz clicks, the lower source level is compensated for by the reduced two-way propagation loss to nearby prey during buzzes. These results help to predict what types of behavioral changes could indicate masking in the wild. Several key knowledge gaps related to masking potential of sonar in echolocating odontocetes were identified that require further investigation to assess the significance of masking.Publisher PDFPeer reviewe

Individual, ecological, and anthropogenic influences on activity budgets of long-finned pilot whales

The authors would like to thank sponsors, NL Ministry of Defence, NOR Ministry of Defence, U.S. Office of Naval Research (N00014-08-1-0984, N00014-10-1-0355, N00014-14-1-0390), FR Ministry of Defence (DGA; public market no. 15860052), World Wildlife Fund Norway (9E0682), and French Total Foundation and Bleustein-Blanchet Foundation. The statistical development work was supported by a separate grant from the U.S. Office of Naval Research (N00014-12-1-0204), under the project entitled Multi-study OCean acoustics Human effects Analysis (MOCHA).Time allocation to different activities and habitats enables individuals to modulate their perceived risks and access to resources, and can reveal important trade-offs between fitness-enhancing activities (e.g., feeding vs. social behavior). Species with long reproductive cycles and high parental investment, such as marine mammals, rely on such behavioral plasticity to cope with rapid environmental change, including anthropogenic stressors. We quantified activity budgets of free-ranging long-finned pilot whales in order to assess individual time trade-offs between foraging and other behaviors in different individual and ecological contexts, and during experimental sound exposures. The experiments included 1-2 and 6-7 kHz naval sonar exposures (a potential anthropogenic stressor), playback of killer whale (a potential predator/competitor) vocalizations, and negative controls. We combined multiple time series data from digital acoustic recording tags (DTAG) as well as group-level social behavior data from visual observations of tagged whales at the surface. The data were classified into near-surface behaviors and dive types (using a hidden Markov model for dive transitions) and aggregated into time budgets. On average, individuals (N=19) spent most of their time (69%) resting and transiting near surface, 21% in shallow dives (depth <40m), and only 10% of their time in deep foraging dives, of which 65% reached a depth 10m from the sea bottom. Individuals in the largest of three body size classes or accompanied by calves tended to spend more time foraging than others. Simultaneous tagging of pairs of individuals showed that up to 50% of the activity budget was synchronized between conspecifics with decreased synchrony during foraging periods. Individuals spent less time foraging when forming larger non-vocal aggregations of individuals in late afternoons, and more time foraging when in the mid-range of water depths (300-400m) available in the study area (50-700m). Individuals reduced foraging time by 83% (29-96%) during their first exposure to sonar, but not during killer whale sound playbacks. A relative increase in foraging during repeat sonar exposures indicated habituation or change in response tactic. We discuss the possible adaptive value of these trade-offs in time allocation to reduce individual conflict while maintaining benefits of group living.Publisher PDFPeer reviewe

Vocal foragers and silent crowds : context-dependent vocal variation in Northeast Atlantic long-finned pilot whales

This study was financially supported by the US Office of Naval Research, The Netherlands Ministry of Defence, the Norwegian Research Council and the Norwegian Ministry of Defence.Vocalisations form a key component of the social interactions and foraging behaviour of toothed whales. We investigated changes in calling and echolocation behaviour of long-finned pilot whales between foraging and non-foraging periods, by combining acoustic recordings and diving depth data from tagged individuals with concurrent surface observations on social behaviour of their group. The pilot whales showed marked vocal variation, specific to foraging and social context. During periods of foraging, pilot whales showed more vocal activity than during non-foraging periods (rest, travel). In addition to the expected increase in echolocation activity, call rates also increased, suggesting that pilot whales communicate more during foraging. Furthermore, calls with multiple inflections occurred more often immediately before and after foraging dives and during the early descent and late ascent phases of foraging dives. However, these calls were almost never detected at diving depths of the tagged whale beyond 350 m. Calls with no or few inflections were produced at all times, irrespective of diving depth of the tagged whale. We discuss possible explanations for the distinct vocal variation associated with foraging periods. In addition, during non-foraging periods, the pilot whales were found to be more silent (no calling or echolocation) in larger, more closely spaced groups. This indicates that increased levels of social cohesion may release the need to stay in touch acoustically. Significance statement: Social toothed whales rely on vocalisations to find prey and interact with conspecifics. Species are often highly vocal and can have elaborate call repertoires. However, it often remains unclear how their repertoire use correlates to specific social and behavioural contexts, which is vital to understand toothed whale foraging strategies and sociality. Combining on-animal tag recordings of diving and acoustic behaviour with observations of social behaviour, we found that pilot whales produce more calls during foraging than during non-foraging periods. Moreover, highly inflected calls were closely associated to the periods around and during foraging dives. This indicates enhanced communication during foraging, which may, for example, enable relocation of conspecifics or sharing of information. Whales reduced their vocal activity (calling and echolocation) at increased levels of social cohesion, indicating that in certain behavioural contexts, closer association (i.e. more closely spaced) may release the need to stay in touch acoustically.Publisher PDFPeer reviewe

Predicting acoustic dose associated with marine mammal behavioural responses to sound as detected with fixed acoustic recorders and satellite tags

Funding: US Office of Naval Research, US Strategic Environmental Research and Development Program (SERDP RC-2337), the French Ministry of Defence (DGA), and the Netherlands Ministry of Defence.To understand the consequences of underwater noise exposure for cetaceans, there is a need for assessments of behavioural responses over increased spatial and temporal scales. Bottom-moored acoustic recorders and satellite tags provide such long-term and large spatial coverage of behaviour compared to short-duration acoustic-recording tags. However, these tools result in a decreased resolution of data from which an animal response can be inferred, and no direct recording of the sound received at the animal. This study discusses the consequence of the decreased resolution of data from satellite tags and fixed acoustic recorders on the acoustic dose estimated by propagation modelling and presents a method for estimating the range of sound levels that animals observed with these methods have received. This problem is illustrated using experimental results obtained during controlled exposures of northern bottlenose whales (Hyperoodon ampullatus) exposed to naval sonar, carried out near Jan Mayen, Norway. It is shown that variability and uncertainties in the sound field, resulting from limited sampling of the acoustic environment, as well as decreased resolution in animal locations, can lead to quantifiable uncertainties in the estimated acoustic dose associated with the behavioural response (in this case avoidance and cessation of foraging.PostprintPeer reviewe

Body density of humpback whales (Megaptera novaengliae) in feeding aggregations estimated from hydrodynamic gliding performance

This study was funded by Strategic Environmental Research and Development Program (https://www.serdp-estcp.org; grant number RC-2337). In addition, the study was partly supported by Core Research for Evolutional Science and Technology by Japan Science and Technology Agency (http://www.jst.go.jp/kisoken/crest/en/index.html, grant number JPMJCR1685) and Bilateral Open Partnership Joint Research Projects by Japan Society for the Promotion of Science (http://www.jsps.go.jp/english/e-bilat/index.html; no specific grant number).Many baleen whales undertake annual fasting and feeding cycles, resulting in substantial changes in their body condition, an important factor affecting fitness. As a measure of lipid-store body condition, tissue density of a few deep diving marine mammals has been estimated using a hydrodynamic glide model of drag and buoyancy forces. Here, we applied the method to shallow-diving humpback whales (Megaptera novaeangliae) in North Atlantic and Antarctic feeding aggregations. High-resolution 3-axis acceleration, depth and speed data were collected from 24 whales. Measured values of acceleration during 5 s glides were fitted to a hydrodynamic glide model to estimate unknown parameters (tissue density, drag term and diving gas volume) in a Bayesian framework. Estimated species-average tissue density (1031.6 ± 2.1 kg m-3, ±95% credible interval) indicates that humpback whale tissue is typically negatively buoyant although there was a large inter-individual variation ranging from 1025.2 to 1043.1 kg m-3. The precision of the individual estimates was substantially finer than the variation across different individual whales, demonstrating a progressive decrease in tissue density throughout the feeding season and comparably high lipid-store in pregnant females. The drag term (CDAm-1) was estimated to be relatively high, indicating a large effect of lift-related induced drag for humpback whales. Our results show that tissue density of shallow diving baleen whales can be estimated using the hydrodynamic gliding model, although cross-validation with other techniques is an essential next step. This method for estimating body condition is likely to be broadly applicable across a range of aquatic animals and environments.Publisher PDFPeer reviewe

Don’t forget the porpoise: acoustic monitoring reveals fine scale temporal variation between bottlenose dolphin and harbour porpoise in Cardigan Bay SAC

Populations of bottlenose dolphin and harbour porpoise inhabit Cardigan Bay, which was designated a Special Area of Conservation (SAC), with bottlenose dolphin listed as a primary feature for its conservation status. Understanding the abundance, distribution and habitat use of species is fundamental for conservation and the implementation of management. Bottlenose dolphin and harbour porpoise usage of feeding sites within Cardigan Bay SAC was examined using passive acoustic monitoring. Acoustic detections recorded with calibrated T-PODs (acoustic data loggers) indicated harbour porpoise to be present year round and in greater relative abundance than bottlenose dolphin. Fine-scale temporal partitioning between the species occurred at three levels: (1) seasonal differences, consistent between years, with porpoise detections peaking in winter months and dolphin detections in summer months; (2) diel variation, consistent across sites, seasons and years, with porpoise detections highest at night and dolphin detections highest shortly after sunrise; and (3) tidal variation was observed with peak dolphin detections occurring during ebb at the middle of the tidal cycle and before low tide, whereas harbour porpoise detections were highest at slack water, during and after high water with a secondary peak recorded during and after low water. General Additive Models (GAMs) were applied to better understand the effects of each covariate. The reported abundance and distribution of the two species, along with the temporal variation observed, have implications for the design and management of protected areas. Currently, in the UK, no SACs have been formally designated for harbour porpoise while three exist for bottlenose dolphins. Here, we demonstrate a need for increased protection and species-specific mitigation measures for harbour porpoise

Sperm whale response to tag boat presence : biologically informed hidden state models quantify lost feeding opportunities

The authors acknowledge the UK Ministry of Defence, U.S. Office of Naval Research, and World Wildlife Fund (Norway) for funding this research.Animal-attached sensors provide invaluable data to describe behavior of cryptic species, such as cetaceans, and are increasingly used to assess anthropogenic disturbance effects. Tag deployment and handling may itself alter the behavior of study animals and there is a need to assess if and when behavior recovers to an undisturbed level. Not all behavioral changes have fitness consequences, and our goal is to derive metrics that can be linked to fitness implications, such as time and energy allocation to different functional behaviors. Here we detail an approach that incorporates biological knowledge and multiple streams of tag-recorded data in a hidden state-switching model to estimate time series of functional behavioral st ates for 12 sperm whales off Norway. Foraging, recovery and resting states were specified in the hidden state model by state-dependent likelihood structures. Comparison of hidden state models revealed a parsimonious set of input time series, and supported the inclusion of a less informed 'silent active' state. There was a high agreement between state estimates and expert classifications. We then used the estimated states in time series models to test three hypotheses for behavioral change during suction-cup tag deployment procedures: change in behavioral states, change in prey capture attempts and locomotion cost, given behavioral state. Sperm whales spent 34% less time at the sea surface and 60% more time in non-foraging silent active state in the presence of the tag boat (''tagging period'' 0.1-2.8 h) than during post-tagging baseline period (1.8-20.8 h). No comparable pre-tagging baseline data were available. Nevertheless, time-decaying models of tagging effects were not retained in model selection, indicating a short-term effect that ceased immediately after the tagging period. We did not find changes in energetic proxies, given behavioral state, however changes in functional state budget indicate costs in terms of lost feeding opportunities and recovery time at surface. These results are useful to quantitatively identify data periods that should not be considered baseline behavior within tag recordings. This functional state approach proves effective to quantify disturbance in terms of time and energy allocation that is based upon general principles that can be applied to other species and biologging applications.Publisher PDFPeer reviewe

Harbour porpoise habitat preferences: Robust spatiotemporal predictions from oportunistic data.

ABSTRACT: Statistical habitat modelling is often flagged as a cost-effective decision tool for species management. However, data that can produce predictions with the desired precision are difficult to collect, especially for species with spatially extensive and dynamic distributions. Data from platforms of opportunity could be used to complement or help design dedicated surveys, but robust inference from such data is challenging. Furthermore, regression models using static covariates may not be sufficient for animals whose habitat preferences change dynamically with season, environmental conditions or foraging strategy. More flexible models introduce difficulties in selecting parsimonious models. We implemented a robust model-averaging framework to dynamically predict harbour porpoise Phocoena phocoena occurrence in a strongly tidal and topographically complex site in southwest Wales using data from a temporally intensive platform of opportunity. Spatial and temporal environmental variables were allowed to interact in a generalized additive model (GAM). We used information criteria to examine an extensive set of 3003 models and average predictions from the best 33. In the best model, 3 main effects and 2 tensor-product interactions explained 46% of the deviance. Model-averaged predictions indicated that harbour porpoises avoided or selected steeper slopes depending on the tidal flow conditions; when the tide started to ebb, occurrence was predicted to increase 3-fold at steeper slopes