339 research outputs found
Light and electric field control of ferromagnetism in magnetic quantum structures
A strong influence of illumination and electric bias on the Curie temperature
and saturation value of the magnetization is demonstrated for semiconductor
structures containing a modulation-doped p-type Cd0.96Mn0.04Te quantum well
placed in various built-in electric fields. It is shown that both light beam
and bias voltage generate an isothermal and reversible cross-over between the
paramagnetic and ferromagnetic phases, in the way that is predetermined by the
structure design. The observed behavior is in quantitative agreement with the
expectations for systems, in which ferromagnetic interactions are mediated by
the weakly disordered two-dimensional hole liquid.Comment: 4 pages and 3 figure
Stability of trions in strongly spin-polarized two-dimensional electron gases
Low-temperature magneto-photoluminescence studies of negatively charged
excitons (X- trions) are reported for n-type modulation-doped ZnSe/Zn(Cd,Mn)Se
quantum wells over a wide range of Fermi energy and spin-splitting. The
magnetic composition is chosen such that these magnetic two-dimensional
electron gases (2DEGs) are highly spin-polarized even at low magnetic fields,
throughout the entire range of electron densities studied (5e10 to 6.5e11
cm^-2). This spin polarization has a pronounced effect on the formation and
energy of X-, with the striking result that the trion ionization energy (the
energy separating X- from the neutral exciton) follows the temperature- and
magnetic field-tunable Fermi energy. The large Zeeman energy destabilizes X- at
the nu=1 quantum limit, beyond which a new PL peak appears and persists to 60
Tesla, suggesting the formation of spin-triplet charged excitons.Comment: 5 pages (RevTex), 4 embedded EPS figs. Submitted to PRB-R
A theory of ferromagnetism in planar heterostructures of (Mn,III)-V semiconductors
A density functional theory of ferromagnetism in heterostructures of compound
semiconductors doped with magnetic impurities is presented. The variable
functions in the density functional theory are the charge and spin densities of
the itinerant carriers and the charge and localized spins of the impurities.
The theory is applied to study the Curie temperature of planar heterostructures
of III-V semiconductors doped with manganese atoms. The mean-field,
virtual-crystal and effective-mass approximations are adopted to calculate the
electronic structure, including the spin-orbit interaction, and the magnetic
susceptibilities, leading to the Curie temperature. By means of these results,
we attempt to understand the observed dependence of the Curie temperature of
planar -doped ferromagnetic structures on variation of their
properties. We predict a large increase of the Curie Temperature by additional
confinement of the holes in a -doped layer of Mn by a quantum well.Comment: 8 pages, 7 figure
Ferromagnetism in semiconductors and oxides: prospects from a ten years' perspective
Over the last decade the search for compounds combining the resources of
semiconductors and ferromagnets has evolved into an important field of
materials science. This endeavour has been fuelled by continual demonstrations
of remarkable low-temperature functionalities found for ferromagnetic
structures of (Ga,Mn)As, p-(Cd,Mn)Te, and related compounds as well as by ample
observations of ferromagnetic signatures at high temperatures in a number of
non-metallic systems. In this paper, recent experimental and theoretical
developments are reviewed emphasising that, from the one hand, they disentangle
many controversies and puzzles accumulated over the last decade and, on the
other, offer new research prospects.Comment: review, 13 pages, 8 figures, 109 reference
Algebraic Comparison of Partial Lists in Bioinformatics
The outcome of a functional genomics pipeline is usually a partial list of
genomic features, ranked by their relevance in modelling biological phenotype
in terms of a classification or regression model. Due to resampling protocols
or just within a meta-analysis comparison, instead of one list it is often the
case that sets of alternative feature lists (possibly of different lengths) are
obtained. Here we introduce a method, based on the algebraic theory of
symmetric groups, for studying the variability between lists ("list stability")
in the case of lists of unequal length. We provide algorithms evaluating
stability for lists embedded in the full feature set or just limited to the
features occurring in the partial lists. The method is demonstrated first on
synthetic data in a gene filtering task and then for finding gene profiles on a
recent prostate cancer dataset
Recent advances in nanocarrier-loaded gels: Which drug delivery technologies against which diseases?
The combination of pharmaceutical technologies can be a wise choice for developing innovative therapeutic strategies. The association of nanocarriers and gels provides new therapeutic possibilities due to the combined properties of the two technologies. Gels support the nanocarriers, localize their administration to the target tissue, and sustain their release. In addition to the properties afforded by the gel, nanocarriers can provide additional drug sustained release or different pharmacokinetic and biodistribution profiles than those from nanocarriers administered by the conventional route to improve the drug therapeutic index. This review focuses on recent (over the last ten years) in vivo data showing the advances and advantages of using nanocarrier-loaded gels. Liposomes, micelles, liquid and solid lipid nanocapsules, polymeric nanoparticles, dendrimers, and fullerenes are all nanotechnologies which have been recently assessed for medical applications, such as cancer therapy, the treatment of cutaneous and infectious diseases, anesthesia, the administration of antidepressants, and the treatment of unexpected diseases, such as alopecia
Nonlinear internal waves over New Jersey's continental shelf
Author Posting. © American Geophysical Union, 2011. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 116 (2011): C03022, doi:10.1029/2010JC006332.Ship and mooring data collected off the coast of New Jersey are used to describe the nonlinear internal wave (NLIW) field and the background oceanographic conditions that formed the waveguide on the shelf. The subinertial, inertial, and tidal circulation are described in detail, and the background fluid state is characterized using the coefficients of the extended Korteweg–de Vries equation. The utility of this type of analysis is demonstrated in description of an amplitude-limited, flat wave. NLIWs observed over most of the month had typical displacements of −8 m, but waves observed from 17–21 August were almost twice as large with displacements near −15 m. During most of the month, wave packets occurred irregularly at a fixed location, and often more than one packet was observed per M2 tidal period. In contrast, the arrival times of the large-amplitude wave groups observed over 17–21 August were more closely phased with the barotropic tide. The time span in which the largest NLIWs were observed corresponded to neap barotropic conditions, but when the shoreward baroclinic energy flux was elevated. During the time of large NLIWs, near-inertial waves were a dominate contributor to the internal motions on the shelf and apparently regulated wave formation, as destructive/constructive modulation of the M2 internal tide by the inertial wavefield at the shelf break corresponded to stronger/weaker NLIWs on the shelf.This work was funded by the Office of
Naval Research
Network deconvolution as a general method to distinguish direct dependencies in networks
Recognizing direct relationships between variables connected in a network is a pervasive problem in biological, social and information sciences as correlation-based networks contain numerous indirect relationships. Here we present a general method for inferring direct effects from an observed correlation matrix containing both direct and indirect effects. We formulate the problem as the inverse of network convolution, and introduce an algorithm that removes the combined effect of all indirect paths of arbitrary length in a closed-form solution by exploiting eigen-decomposition and infinite-series sums. We demonstrate the effectiveness of our approach in several network applications: distinguishing direct targets in gene expression regulatory networks; recognizing directly interacting amino-acid residues for protein structure prediction from sequence alignments; and distinguishing strong collaborations in co-authorship social networks using connectivity information alone. In addition to its theoretical impact as a foundational graph theoretic tool, our results suggest network deconvolution is widely applicable for computing direct dependencies in network science across diverse disciplines.National Institutes of Health (U.S.) (grant R01 HG004037)National Institutes of Health (U.S.) (grant HG005639)Swiss National Science Foundation (Fellowship)National Science Foundation (U.S.) (NSF CAREER Award 0644282
An experimental study of the intrinsic stability of random forest variable importance measures
BACKGROUND: The stability of Variable Importance Measures (VIMs) based on random forest has recently received increased attention. Despite the extensive attention on traditional stability of data perturbations or parameter variations, few studies include influences coming from the intrinsic randomness in generating VIMs, i.e. bagging, randomization and permutation. To address these influences, in this paper we introduce a new concept of intrinsic stability of VIMs, which is defined as the self-consistence among feature rankings in repeated runs of VIMs without data perturbations and parameter variations. Two widely used VIMs, i.e., Mean Decrease Accuracy (MDA) and Mean Decrease Gini (MDG) are comprehensively investigated. The motivation of this study is two-fold. First, we empirically verify the prevalence of intrinsic stability of VIMs over many real-world datasets to highlight that the instability of VIMs does not originate exclusively from data perturbations or parameter variations, but also stems from the intrinsic randomness of VIMs. Second, through Spearman and Pearson tests we comprehensively investigate how different factors influence the intrinsic stability. RESULTS: The experiments are carried out on 19 benchmark datasets with diverse characteristics, including 10 high-dimensional and small-sample gene expression datasets. Experimental results demonstrate the prevalence of intrinsic stability of VIMs. Spearman and Pearson tests on the correlations between intrinsic stability and different factors show that #feature (number of features) and #sample (size of sample) have a coupling effect on the intrinsic stability. The synthetic indictor, #feature/#sample, shows both negative monotonic correlation and negative linear correlation with the intrinsic stability, while OOB accuracy has monotonic correlations with intrinsic stability. This indicates that high-dimensional, small-sample and high complexity datasets may suffer more from intrinsic instability of VIMs. Furthermore, with respect to parameter settings of random forest, a large number of trees is preferred. No significant correlations can be seen between intrinsic stability and other factors. Finally, the magnitude of intrinsic stability is always smaller than that of traditional stability. CONCLUSION: First, the prevalence of intrinsic stability of VIMs demonstrates that the instability of VIMs not only comes from data perturbations or parameter variations, but also stems from the intrinsic randomness of VIMs. This finding gives a better understanding of VIM stability, and may help reduce the instability of VIMs. Second, by investigating the potential factors of intrinsic stability, users would be more aware of the risks and hence more careful when using VIMs, especially on high-dimensional, small-sample and high complexity datasets
Chalk-Ex—fate of CaCO3 particles in the mixed layer : evolution of patch optical properties
Author Posting. © American Geophysical Union, 2009. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 114 (2009): C07020, doi:10.1029/2008JC004902.The fate of particles in the mixed layer is of great relevance to the global carbon cycle as well as to the propagation of light in the sea. We conducted four manipulative field experiments called “Chalk-Ex” in which known quantities of uniform, calcium carbonate particles were injected into the surface mixed layer. Since the production term for these patches was known to high precision, the experimental design allowed us to focus on terms associated with particle loss. The mass of chalk in the patches was evaluated using the well-calibrated light-scattering properties of the chalk plus measurements from a variety of optical measurements and platforms. Patches were surveyed with a temporal resolution of hours over spatial scales of tens of kilometers. Our results demonstrated exponential loss of the chalk particles with time from the patches. There was little evidence for rapid sinking of the chalk. Instead, horizontal eddy diffusion appeared to be the major factor affecting the dispersion of the chalk to concentrations below the limits of detection. There was unequivocal evidence of subduction of the chalk along isopycnals and subsequent formation of thin layers. Shear dispersion is the most likely mechanism to explain these results. Calculations of horizontal eddy diffusivity were consistent with other mixed layer patch experiments. Our results provide insight into the importance of physics in the formation of subsurface particle maxima in the sea, as well as the importance of rapid coccolith production and critical patch size for maintenance of natural coccolithophore blooms in nature.We would like to thank the Office of Naval
Research/Optical and Biological Oceanography Program for their support
of Chalk-Ex with awards N000140110042 (WMB) and N00014-01-1-0141
(AJP). Additional funding for this work came from ONR (N00014-05-1-
0111) and NASA (NNG04Gl11G, NNX08AC27G, NNG04HZ25C) to
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