600 research outputs found

    Absorption and fluorescence properties of chromophoric dissolved organic matter of the eastern Bering Sea in the summer with special reference to the influence of a cold pool

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    The absorption and fluorescence properties of chromophoric dissolved organic matter (CDOM) are reported for the inner shelf, slope waters and outer shelf regions of the eastern Bering Sea during the summer of 2008, when a warm, thermally stratified surface mixed layer lay over a cold pool (< 2 °C) that occupied the entire middle shelf. CDOM absorption at 355 nm (<i>a</i><sub>g</sub>355) and its spectral slope (<i>S</i>) in conjunction with excitation–emission matrix (EEM) fluorescence and parallel factor analysis (PARAFAC) revealed large variability in the characteristics of CDOM in different regions of the Bering Sea. PARAFAC analysis aided in the identification of three humic-like (components one, two and five) and two protein-like (a tyrosine-like component three, and a tryptophan-like component four) components. In the extensive shelf region, average absorption coefficients at 355 nm (<i>a</i><sub>g</sub>355, m<sup>−1</sup>) and DOC concentrations (μM) were highest in the inner shelf (0.342 ± 0.11 m<sup>−1</sup>, 92.67 ± 14.60 μM) and lower in the middle (0.226 ± 0.05 m<sup>−1</sup>, 78.38 ± 10.64 μM) and outer (0.185 ± 0.05 m<sup>−1</sup>, 79.24 ± 18.01 μM) shelves, respectively. DOC concentrations, however were not significantly different, suggesting CDOM sources and sinks to be uncoupled from DOC. Mean spectral slopes <i>S</i> were elevated in the middle shelf (24.38 ± 2.25 μm<sup>−1</sup>) especially in the surface waters (26.87 ± 2.39 μm<sup>−1</sup>) indicating high rates of photodegradation in the highly stratified surface mixed layer, which intensified northwards in the northern middle shelf likely contributing to greater light penetration and to phytoplankton blooms at deeper depths. The fluorescent humic-like components one, two, and five were most elevated in the inner shelf most likely from riverine inputs. Along the productive "green belt" in the outer shelf/slope region, absorption and fluorescence properties indicated the presence of fresh and degraded autochthonous DOM. Near the Unimak Pass region of the Aleutian Islands, low DOC and <i>a</i><sub>g</sub>355 (mean 66.99 ± 7.94 μM; 0.182 ± 0.05 m<sup>−1</sup>) and a high <i>S</i> (mean 25.95 ± 1.58 μm<sup>−1</sup>) suggested substantial photobleaching of the Alaska Coastal Water, but high intensities of humic-like and protein-like fluorescence suggested sources of fluorescent DOM from coastal runoff and glacier meltwaters during the summer. The spectral slope <i>S</i> vs. <i>a</i><sub>g</sub>355 relationship revealed terrestrial and oceanic end members along with intermediate water masses that were modeled using nonlinear regression equations that could allow water mass differentiation based on CDOM optical properties. Spectral slope <i>S</i> was negatively correlated (<i>r</i><sup>2</sup> = 0.79) with apparent oxygen utilization (AOU) for waters extending from the middle shelf into the deep Bering Sea indicating increasing microbial alteration of CDOM with depth. Although our data show that the CDOM photochemical environment of the Bering Sea is complex, our current information on its optical properties will aid in better understanding of the biogeochemical role of CDOM in carbon budgets in relation to the annual sea ice and phytoplankton dynamics, and to improved algorithms of ocean color remote sensing for this region

    Light absorption properties of southeastern Bering Sea waters: Analysis, parameterization and implications for remote sensing.

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    The absorption coefficients of phytoplankton (aPHY(λ)), non-algal particles (NAP) (aNAP(λ)) and colored dissolved organic matter (CDOM) (aCDOM(λ)) were investigated and parameterized in the southeastern Bering Sea during July 2008. The absorption coefficients were well structured with respect to hydrographic and biogeochemical characteristics of the shelf. The highest values of aPHY(443) were observed offshore and the lowest values of aPHY(443) were found in the coastal domain, a low productivity region associated with limited macronutrients. Values of aDG(λ) (aCDOM(λ) + aNAP(λ)) revealed an east–west gradient pattern with higher values in the coastal domain, and lower values in the outer domain. Lower chlorophyll specific aPHY(λ) (a*PHY(λ)) observed relative to middle and lower latitude waters indicated a change in pigment composition and/or package effect, which was consistent with phytoplankton community structure. aCDOM(λ) was the dominant light absorbing coefficient at all wavelengths examined except at 676 nm. Modeling of remote-sensing reflectance (Rrs(λ)) and the diffuse attenuation coefficient (Kd(λ)) from inherent optical properties revealed the strong influence of aCDOM(λ) on Rrs(λ) and Kd(λ). Good optical closure was achieved between modeled and radiometer measured Rrs(λ) and Kd(λ) with average percent difference of less than 25% and 19% respectively, except at red wavelengths. The aCDOM(λ) accounted for > 50% of Kd(λ) which was vertically variable. Chlorophyll-a calculated by the NASA standard chlorophyll-a algorithm (OC4.v6) was overestimated due to higher aCDOM(λ) and underestimated due to lower a*PHY(λ) at low and high concentrations of chlorophyll-a, respectively

    Seismic tomographic imaging of the Eastern Mediterranean Mantle: Implications for terminal-stage subduction, the uplift of Anatolia, and the development of the North Anatolian Fault

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    The Eastern Mediterranean captures the eastwest transition from active subduction of Earth'soldest oceanic lithosphere to continental collision, making it an ideal location to study terminalstagesubduction. Asthenospheric or subductionrelated processes are the main candidates for the region's ∼2kmuplift and Miocene volcanism; however, their relative importance is debated. To address these issues, wepresent new P and S wave relative arrivaltime tomographic models that reveal fast anomalies associatedwith an intact Aegean slab in the west, progressing to a fragmented, partially continental, Cyprean slabbelow central Anatolia. We resolve a gap between the Aegean and Cyprean slabs, and a horizontal tear in theCyprean slab below the Central Anatolian Volcanic Province. Below eastern Anatolia, the completelydetached “Bitlis” slab is characterized by fast wave speeds at ∼500 km depth. Assuming slab sinkingrates mirror ArabiaAnatolia convergence rates, the Bitlis slab's location indicates an Oligocene (∼26 Ma)breakoff. Results further reveal a strong velocity contrast across the North Anatolian Fault likelyrepresenting a 40–60 km decrease in lithospheric thickness from the Precambrian lithosphere north of thefault to a thinned Anatolian lithosphere in the south. Slow uppermostmantle wave speeds below activevolcanoes in eastern Anatolia, and ratios of P to S wave relative traveltimes, indicate a thin lithosphere andmelt contributions. Positive central and eastern Anatolian residual topography requires additional supportfrom hot/buoyant asthenosphere to maintain the 1–2 km elevation in addition to an almost absentlithospheric mantle. Smallscale fast velocity structures in the shallow mantle above the Bitlis slab maytherefore be drips of Anatolian lithospheric mantle

    CASSIS: The Cornell Atlas of Spitzer/Infrared Spectrograph Sources. II. High-resolution observations

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    The Infrared Spectrograph (IRS) on board the Spitzer Space Telescope observed about 15,000 objects during the cryogenic mission lifetime. Observations provided low-resolution (R~60-127) spectra over ~5-38um and high-resolution (R~600) spectra over ~10-37um. The Cornell Atlas of Spitzer/IRS Sources (CASSIS) was created to provide publishable quality spectra to the community. Low-resolution spectra have been available in CASSIS since 2011, and we present here the addition of the high-resolution spectra. The high-resolution observations represent approximately one third of all staring observations performed with the IRS instrument. While low-resolution observations are adapted to faint objects and/or broad spectral features (e.g., dust continuum, molecular bands), high-resolution observations allow more accurate measurements of narrow features (e.g., ionic emission lines) as well as a better sampling of the spectral profile of various features. Given the narrow aperture of the two high-resolution modules, cosmic ray hits and spurious features usually plague the spectra. Our pipeline is designed to minimize these effects through various improvements. A super sampled point-spread function was created in order to enable the optimal extraction in addition to the full aperture extraction. The pipeline selects the best extraction method based on the spatial extent of the object. For unresolved sources, the optimal extraction provides a significant improvement in signal-to-noise ratio over a full aperture extraction. We have developed several techniques for optimal extraction, including a differential method that eliminates low-level rogue pixels (even when no dedicated background observation was performed). The updated CASSIS repository now includes all the spectra ever taken by the IRS, with the exception of mapping observations

    Immunomodulatory and neuroprotective effect of cryopreserved allogeneic mesenchymal stem cells on spinal cord injury in rats

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    This study aimed to evaluate the immunomodulatory and neuroprotective effects of allogeneic and cryopreserved mesenchymal stem cells (MSCs) on spinal cord injury. A total of 120 rats were distributed into the following groups: negative control (NC) - without injury, positive control (PC) - with injury without treatment, and group treated with MSC (GMSC) - with injury and treated. Motor function was evaluated by the BBB test at 24, 48, and 72 h and at 8 and 21 postoperative days. Spinal cords were evaluated by histopathology and immunohistochemistry to determine the expression of CD68, NeuN, and GFAP. IL-10, TNF-alpha, IL-1 beta, TGF-beta, BDNF, GDNF, and VEGF expression was quantified by RT-PCR. The GMSC presented higher scores for motor function at 72 h and 8 and 21 days after injury, lower expression of CD68 at 8 days, and lower expression of GFAP at 21 days compared to the PC. In addition, higher expression of NeuN and lower degeneration of the white matter occurred at 21 days. The GMSC also showed higher expression of IL-10 24 h after injury, GDNF at 48 h and 8 days, and VEGF at 21 days. Moreover, lower expression of TNF-alpha was observed at 8 and 21 days and TGF-beta at 24 h and 21 days. There were no differences in the expression of IL-1 beta and BDNF between the GMSC and PC. Thus, cryopreserved MSCs promote immunomodulatory and neuroprotective effects in rats with spinal cord injury by increasing IL-10, GDNF, and VEGF expression and reducing TNF-alpha and TGF-beta expression.Fundacao de Amparo a Pesquisa do Estado de Minas Gerais (FAPEMIG)CAPESVeterinary SchoolLaboratory of Molecular Biology of the Department of Immunology and Biochemistry of the Institute of Biological SciencesUniv Uberaba, Dept Med Ver, Uberaba, MG, BrazilUniv Fed Minas Gerais, Escola Med Vet, Belo Horizonte, MG, BrazilUniv Fed Minas Gerais, Inst Ciencias Biol, Dept Bioquim & Imunol, Belo Horizonte, MG, BrazilUniv Estadual Santa Cruz, Dept Ciencias Biol, Ilheus, BA, BrazilUniv Estadual Santa Cruz, Dept Ciencias Agr & Ambientais, Ilheus, BA, BrazilUniv Fed Sao Paulo, Dept Biociencias, Santos, SP, BrazilUniv Fed Sao Paulo, Dept Biociencias, Santos, SP, BrazilWeb of Scienc
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