50 research outputs found

    Morphometric Measurements of Scots Pine Needles from Radioactively Contaminated Area

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    The morphometric indices of needles were investigated in chronically irradiated Scots pine (Pinus sylvestris L.) populations from territories that were heavily contaminated by radionuclides as a result of the Chernobyl Nuclear Power Plant accident. The variability in needle weight and length, as well as the fluctuating asymmetry indices were studied in seven contaminated and two reference populations of Scots pine in 2011, 2013, 2014 and 2016. The weight of needles in the contaminated populations was significantly higher than in the reference population; however, the dependence of this index on the level of radiation exposure was not revealed in the studied range of doses. The length of needles differed significantly from the references populations. The effect changed from decreasing to increasing in various years of observation; however, in 2016 this index decreased with the dose rate of β-radiation. The index of fluctuating asymmetry in needle length was significantly higher than at the reference sites during three years and correlated to the estimated annual absorbed dose in 2011 and 2013. No relationship was revealed between the asymmetry in weight of paired needles and radiation exposure

    Vocational training of future teachers of physical culture in view of individual-psychological features

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    The purpose of the present research was to develop and verify efficiency of the technique of formation of professional pedagogical skills of students on the faculty of physical culture, in view of individual-psychological personal features. The studies proved a statistically verified influence of individual-psychological features of students’ personality on success in formation of their skills

    An extended dose-response model for microbial responses to ionizing radiation

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    © 2017 Siasou, Johnson and Willey. An understanding of the environmental toxicology of ionizing radiation (IR) is needed because nuclear power production is expanding and there is increasing pressure to build nuclear waste repositories. The effects of IR in the environment have long been investigated but there have been fewer studies involving environmental microbiology than its importance to key ecosystems services demands. Here, we highlight some unique aspects of the relationship between microbes and IR and use them to suggest an extended dose-response model. At high doses, IR causes DNA damage and oxidative stress but some microbes have a remarkable capacity for DNA repair and are tolerant of oxidative stress. Not only is significant radioresistance increasingly being reported for microbes, but some microbes are even radiotrophic. The stressful radiative environment of the early Earth might help explain the existence of these traits, which challenge the assumptions of current dose response models for IR. We suggest that a perspective that takes into account these traits plus both dose and dose rate can be used to model an "effects landscape" that might provide insights for the environmental toxicology of IR to microbes. This might help to predict the effects of IR on key ecosystem processes and also be useful in understanding the environmental toxicology of IR in general

    Reanalysis of cancer mortality in Japanese A-bomb survivors exposed to low doses of radiation: bootstrap and simulation methods

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    <p>Abstract</p> <p>Background</p> <p>The International Commission on Radiological Protection (ICRP) recommended annual occupational dose limit is 20 mSv. Cancer mortality in Japanese A-bomb survivors exposed to less than 20 mSv external radiation in 1945 was analysed previously, using a latency model with non-linear dose response. Questions were raised regarding statistical inference with this model.</p> <p>Methods</p> <p>Cancers with over 100 deaths in the 0 - 20 mSv subcohort of the 1950-1990 Life Span Study are analysed with Poisson regression models incorporating latency, allowing linear and non-linear dose response. Bootstrap percentile and Bias-corrected accelerated (BCa) methods and simulation of the Likelihood Ratio Test lead to Confidence Intervals for Excess Relative Risk (ERR) and tests against the linear model.</p> <p>Results</p> <p>The linear model shows significant large, positive values of ERR for liver and urinary cancers at latencies from 37 - 43 years. Dose response below 20 mSv is strongly non-linear at the optimal latencies for the stomach (11.89 years), liver (36.9), lung (13.6), leukaemia (23.66), and pancreas (11.86) and across broad latency ranges. Confidence Intervals for ERR are comparable using Bootstrap and Likelihood Ratio Test methods and BCa 95% Confidence Intervals are strictly positive across latency ranges for all 5 cancers. Similar risk estimates for 10 mSv (lagged dose) are obtained from the 0 - 20 mSv and 5 - 500 mSv data for the stomach, liver, lung and leukaemia. Dose response for the latter 3 cancers is significantly non-linear in the 5 - 500 mSv range.</p> <p>Conclusion</p> <p>Liver and urinary cancer mortality risk is significantly raised using a latency model with linear dose response. A non-linear model is strongly superior for the stomach, liver, lung, pancreas and leukaemia. Bootstrap and Likelihood-based confidence intervals are broadly comparable and ERR is strictly positive by bootstrap methods for all 5 cancers. Except for the pancreas, similar estimates of latency and risk from 10 mSv are obtained from the 0 - 20 mSv and 5 - 500 mSv subcohorts. Large and significant cancer risks for Japanese survivors exposed to less than 20 mSv external radiation from the atomic bombs in 1945 cast doubt on the ICRP recommended annual occupational dose limit.</p

    Sunlight-Exposed Biofilm Microbial Communities Are Naturally Resistant to Chernobyl Ionizing-Radiation Levels

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    BACKGROUND: The Chernobyl accident represents a long-term experiment on the effects of exposure to ionizing radiation at the ecosystem level. Though studies of these effects on plants and animals are abundant, the study of how Chernobyl radiation levels affect prokaryotic and eukaryotic microbial communities is practically non-existent, except for a few reports on human pathogens or soil microorganisms. Environments enduring extreme desiccation and UV radiation, such as sunlight exposed biofilms could in principle select for organisms highly resistant to ionizing radiation as well. METHODOLOGY/PRINCIPAL FINDINGS: To test this hypothesis, we explored the diversity of microorganisms belonging to the three domains of life by cultivation-independent approaches in biofilms developing on concrete walls or pillars in the Chernobyl area exposed to different levels of radiation, and we compared them with a similar biofilm from a non-irradiated site in Northern Ireland. Actinobacteria, Alphaproteobacteria, Bacteroidetes, Acidobacteria and Deinococcales were the most consistently detected bacterial groups, whereas green algae (Chlorophyta) and ascomycete fungi (Ascomycota) dominated within the eukaryotes. Close relatives to the most radio-resistant organisms known, including Rubrobacter species, Deinococcales and melanized ascomycete fungi were always detected. The diversity of bacteria and eukaryotes found in the most highly irradiated samples was comparable to that of less irradiated Chernobyl sites and Northern Ireland. However, the study of mutation frequencies in non-coding ITS regions versus SSU rRNA genes in members of a same actinobacterial operational taxonomic unit (OTU) present in Chernobyl samples and Northern Ireland showed a positive correlation between increased radiation and mutation rates. CONCLUSIONS/SIGNIFICANCE: Our results show that biofilm microbial communities in the most irradiated samples are comparable to non-irradiated samples in terms of general diversity patterns, despite increased mutation levels at the single-OTU level. Therefore, biofilm communities growing in sunlight exposed substrates are capable of coping with increased mutation rates and appear pre-adapted to levels of ionizing radiation in Chernobyl due to their natural adaptation to periodical desiccation and ambient UV radiation

    Effects of Radioactive Contamination on Plant Populations: a Case of Low Doses and Multipollutant Exposure

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    An assessment of the state of plant and animal populations inhabiting polluted territories and the analysis of mechanisms of their adaptation to adverse environmental conditions undoubtedly has general biological importance. Consequently, studies that examine biological effects on non-human biota in natural settings provide a unique opportunity for obtaining information about the potential biological hazard associated with radioactive contamination. Nevertheless, up to now there is a distinct lack of quantitative data on the real long-term biological consequences of chronic radiation exposure lasting a long period of time. Actually, few studies exist that are directly relevant to understanding the responses of plant and animal populations to radionuclides in their natural environments. The results of long-term field experiments in the 30-km Chernobyl NPP zone, in the vicinity of the radioactive wastes storage facility (Leningrad Region), at radium production industry storage cell territory (the Komi Republic), in the Bryansk Region affected by the Chernobyl accident, and in Semipalatinsk Test Site, Kazakhstan that have been carried out in our laboratory on different species of wild and agricultural plants are discussed. Although radionuclides cause primary damage at the molecular level, there are emergent effects at the level of populations, non-predictable solely from the knowledge of elementary mechanisms of the pollutants influence. Plant populations growing in areas with relatively low levels of pollution are characterized by the increased level of both cytogenetic disturbances and genetic diversity. Man-made pollution may influence an evolution of exposed populations through a contaminant-induced selection process. Radioactive contamination of the plants environment activates genetic mechanisms, changing a populations resistance to exposure. However, in different radioecological situations, genetic adaptation to extreme edaphic conditions in plant populations could be achieved with different rates. These processes have a genetic basis; therefore, understanding changes at the genetic level should help in identifying more complex changes at higher levels

    A Pipeline for Non-model Organisms for de novo Transcriptome Assembly, Annotation, and Gene Ontology Analysis Using Open Tools: Case Study with Scots Pine

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    RNA sequencing (RNA-seq) has opened up the possibility of studying virtually any organism at the whole transcriptome level. Nevertheless, the absence of a sequenced and accurately annotated reference genome may be an obstacle for applying this technique to non-model organisms, especially for those with a complex genome. While de novo transcriptome assembly can circumvent this problem, it is often computationally demanding. Furthermore, the transcriptome annotation and Gene Ontology enrichment analysis without an automatized system is often a laborious task. Here we describe step-by-step the pipeline that was used to perform the transcriptome assembly, annotation, and Gene Ontology analysis of Scots pine (Pinus sylvestris), a gymnosperm species with complex genome. Using only free software available for the scientific community and running on a standard personal computer, the pipeline intends to facilitate transcriptomic studies for non-model species, yet being flexible to be used with any organism
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