1,727 research outputs found
Investigating carbon materials nanostructure using image orientation statistics
International audienceA new characterization method of the lattice fringe images of turbostratic carbons is proposed. This method is based on the computation of their orientation field without explicit detection of fringes. It allows meaningful insights into the material nanostructure and nanotexture at several scales, either qualitatively or quantitatively. The calculation of pairwise spatial statistics of the orientation field at short distance provides measurements of the coherence lengths along any direction, in particular along and orthogonally to the layers. These statistics also allow representing orientation coherence patterns typical of the observed nanostructure. At larger distances, the mean disorientation of the fringes is computed and information about the homogeneity of the sample is obtained. An experimental validation is carried out on various artificial images and an application to the characterization of four bulk turbostratic carbons is provided
Correlation between human ether-a-go-go-related gene channel inhibition and action potential prolongation
Background and Purpose:
Human ether-a-go-go-related gene (hERG; Kv11.1) channel inhibition is a widely accepted predictor of cardiac arrhythmia. hERG channel inhibition alone is often insufficient to predict pro-arrhythmic drug effects. This study used a library of dofetilide derivatives to investigate the relationship between standard measures of hERG current block in an expression system and changes in action potential duration (APD) in human-induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs). The interference from accompanying block of Cav1.2 and Nav1.5 channels was investigated along with an in silico AP model.
Experimental Approach:
Drug-induced changes in APD were assessed in hiPSC-CMs using voltage-sensitive dyes. The IC50 values for dofetilide and 13 derivatives on hERG current were estimated in an HEK293 expression system. The relative potency of each drug on APD was estimated by calculating the dose (D150) required to prolong the APD at 90% (APD90) repolarization by 50%.
Key Results:
The D150 in hiPSC-CMs was linearly correlated with IC50 of hERG current. In silico simulations supported this finding. Three derivatives inhibited hERG without prolonging APD, and these compounds also inhibited Cav1.2 and/or Nav1.5 in a channel state-dependent manner. Adding Cav1.2 and Nav1.2 block to the in silico model recapitulated the direction but not the extent of the APD change.
Conclusions and Implications:
Potency of hERG current inhibition correlates linearly with an index of APD in hiPSC-CMs. The compounds that do not correlate have additional effects including concomitant block of Cav1.2 and/or Nav1.5 channels. In silico simulations of hiPSC-CMs APs confirm the principle of the multiple ion channel effects
Solving the Sports League Scheduling Problem with Tabu Search
In this paper we present a tabu approach for a version of the Sports League Scheduling Problem. The approach adopted is based on a formulation of the problem as a Constraint Satisfaction Problem (CSP). Tests were carried out on problem instances of up to 40 teams representing 780 integer variables with 780 values per variable. Experimental results show that this approach outperforms some existing methods and is one of the most promising methods for solving problems of this type
Sub-terahertz, microwaves and high energy emissions during the December 6, 2006 flare, at 18:40 UT
The presence of a solar burst spectral component with flux density increasing
with frequency in the sub-terahertz range, spectrally separated from the
well-known microwave spectral component, bring new possibilities to explore the
flaring physical processes, both observational and theoretical. The solar event
of 6 December 2006, starting at about 18:30 UT, exhibited a particularly
well-defined double spectral structure, with the sub-THz spectral component
detected at 212 and 405 GHz by SST and microwaves (1-18 GHz) observed by the
Owens Valley Solar Array (OVSA). Emissions obtained by instruments in
satellites are discussed with emphasis to ultra-violet (UV) obtained by the
Transition Region And Coronal Explorer (TRACE), soft X-rays from the
Geostationary Operational Environmental Satellites (GOES) and X- and gamma-rays
from the Ramaty High Energy Solar Spectroscopic Imager (RHESSI). The sub-THz
impulsive component had its closer temporal counterpart only in the higher
energy X- and gamma-rays ranges. The spatial positions of the centers of
emission at 212 GHz for the first flux enhancement were clearly displaced by
more than one arc-minute from positions at the following phases. The observed
sub-THz fluxes and burst source plasma parameters were found difficult to be
reconciled to a purely thermal emission component. We discuss possible
mechanisms to explain the double spectral components at microwaves and in the
THz ranges.Comment: Accepted version for publication in Solar Physic
Gene projects: a genome web tool for ongoing mining and annotation applied to CitEST
Genome projects, both genomic DNA and ESTs (cDNA), generate a large amount of information, demanding time and a well-structured bioinformatics laboratory to manage these data. These genome projects use information available in heterogeneous formats from different sources. The amount and heterogeneity of this information, as well as the absence of a world consensus pattern, make the integration of these data a difficult task. At the same time, sub-tasks, such as microarray analyses of these projects, are very complex. This creates a demand for the development of creative solutions for ongoing annotation, thematic projects, microarray experiments, etc. This paper presents Gene Projects, a system developed to integrate all kinds of solutions.10301036Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES
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