7,462 research outputs found
Stiff Polymers, Foams and Fiber Networks
We study the elasticity of fibrous materials composed of generalized stiff
polymers. It is shown that in contrast to cellular foam-like structures affine
strain fields are generically unstable. Instead, a subtle interplay between the
architecture of the network and the elastic properties of its building blocks
leads to intriguing mechanical properties with intermediate asymptotic scaling
regimes. We present exhaustive numerical studies based on a finite element
method complemented by scaling arguments.Comment: 4 pages, 5 figure
Entropic forces generated by grafted semiflexible polymers
The entropic force exerted by the Brownian fluctuations of a grafted
semiflexible polymer upon a rigid smooth wall are calculated both analytically
and by Monte Carlo simulations. Such forces are thought to play an important
role for several cellular phenomena, in particular, the physics of
actin-polymerization-driven cell motility and movement of bacteria like
Listeria. In the stiff limit, where the persistence length of the polymer is
larger than its contour length, we find that the entropic force shows scaling
behavior. We identify the characteristic length scales and the explicit form of
the scaling functions. In certain asymptotic regimes we give simple analytical
expressions which describe the full results to a very high numerical accuracy.
Depending on the constraints imposed on the transverse fluctuations of the
filament there are characteristic differences in the functional form of the
entropic forces; in a two-dimensional geometry the entropic force exhibits a
marked peak.Comment: 21 pages, 18 figures, minor misprints correcte
A freely relaxing polymer remembers how it was straightened
The relaxation of initially straight semiflexible polymers has been discussed
mainly with respect to the longest relaxation time. The biologically relevant
non-equilibrium dynamics on shorter times is comparatively poorly understood,
partly because "initially straight" can be realized in manifold ways. Combining
Brownian dynamics simulations and systematic theory, we demonstrate how
different experimental preparations give rise to specific short-time and
universal long-time dynamics. We also discuss boundary effects and the onset of
the stretch--coil transition.Comment: 14 pages, 5 figures, 3 table
Biceps femoris long head morphology in youth competitive alpine skiers is associated with age, biological maturation and traumatic lower extremity injuries
Lower extremity injuries are common in competitive alpine skiers, and the knee and lower leg are often affected. The hamstring muscles, especially the biceps femoris long head (BFlh), can stabilize the knee and the hip and may counteract various adverse loading patterns during typical mechanisms leading to severe lower extremity injuries. The aim of the present study was to describe BFlh morphology in youth competitive alpine skiers in relation to sex, age and biological maturation and to investigate its association with the occurrence of traumatic lower extremity injuries in the upcoming season. 95 youth skiers underwent anthropometric measurements, maturity offset estimations and ultrasound assessment, followed by 12-months prospective injury surveillance. Unpaired t tests showed that the two sexes did not differ in BFlh morphology, including fascicle length (Lf), pennation angle (PA), muscle thickness (MT) and average anatomical cross-sectional area (ACSAavg). In contrast, U16 skiers had longer fascicles than U15 skiers (9.5 ± 1.3 cm vs 8.9 ± 1.3 cm, p < 0.05). Linear regression analyses revealed that maturity offset was associated with Lf (R2 = 0.129, p < 0.001), MT (R2 = 0.244, p < 0.001) and ACSAavg (R2 = 0.065, p = 0.007). No association was found between maturity offset and PA (p = 0.524). According to a binary logistic regression analysis, ACSAavg was significantly associated with the occurrence of traumatic lower extremity injuries (Chi-square = 4.627, p = 0.031, RNagelkerke2 = 0.064, Cohen f = 0.07). The present study showed that BFlh morphology is age- and biological maturation-dependent and that BFlh ACSAavg can be considered a relevant modifiable variable associated with lower extremity injuries in youth competitive alpine skiers
Direct transesterification of microalgae after Pulsed Electric Field ( PEF ) treatment
Background
Lipid extraction is a major bottleneck for the commercialization of microalgae due to energy costs involved during solvent recycling. Direct transesterification offers the possibility to bypass the extraction step by immediately converting the lipids to fatty acids methyl esters (FAMEs). In this study, the efficiency of direct transesterification after pulsed electric field (PEF) was evaluated. Freshly harvested Auxenochlorella protothecoides (A. protothecoides), cultivated either autotrophically or mixotrophically, was subjected to PEF. Two treatment energies were tested, 0.25 MJ/kgdw and 1.5 MJ/kgdw and results were compared with conventional two-step transesterification.
Results
For autotrophically grown A. protothecoides, the percentage of the total FAMEs recovered from untreated biomass and microalgae treated with 0.25 MJ/kgdw was 30% for both cases while for 1.5 MJ/kgdw it was 65%. A 24-h incubation step between PEF-treatment and direct transesterification significantly improved the results. Untreated biomass remained stable with 30% of FAMEs, while with both treatment energies a 97% FAME recovery was achieved. However, for mixotrophic A. protothecoides the process was not as effective. Approximately 30% of FAMEs were recovered for all three conditions immediately after PEF with only a marginal increase after incubation. The reason for this different behavior of the two cultivation modes is unknown and under investigation.
Conclusions
Overall, the synergy between PEF and direct transesterification was proven to have potential, in particular for autotrophic microalgae. Its implementation and further optimization in a biorefinery therefore merits further attention
Direct transesterification of microalgae after Pulsed Electric Field ( PEF ) treatment
Background
Lipid extraction is a major bottleneck for the commercialization of microalgae due to energy costs involved during solvent recycling. Direct transesterification offers the possibility to bypass the extraction step by immediately converting the lipids to fatty acids methyl esters (FAMEs). In this study, the efficiency of direct transesterification after pulsed electric field (PEF) was evaluated. Freshly harvested Auxenochlorella protothecoides (A. protothecoides), cultivated either autotrophically or mixotrophically, was subjected to PEF. Two treatment energies were tested, 0.25 MJ/kgdw and 1.5 MJ/kgdw and results were compared with conventional two-step transesterification.
Results
For autotrophically grown A. protothecoides, the percentage of the total FAMEs recovered from untreated biomass and microalgae treated with 0.25 MJ/kgdw was 30% for both cases while for 1.5 MJ/kgdw it was 65%. A 24-h incubation step between PEF-treatment and direct transesterification significantly improved the results. Untreated biomass remained stable with 30% of FAMEs, while with both treatment energies a 97% FAME recovery was achieved. However, for mixotrophic A. protothecoides the process was not as effective. Approximately 30% of FAMEs were recovered for all three conditions immediately after PEF with only a marginal increase after incubation. The reason for this different behavior of the two cultivation modes is unknown and under investigation.
Conclusions
Overall, the synergy between PEF and direct transesterification was proven to have potential, in particular for autotrophic microalgae. Its implementation and further optimization in a biorefinery therefore merits further attention
Duties to Organizational Clients
Loyalty to an organizational client means fidelity to the substantive legal structure that constitutes it. Although this principle is not controversial in the abstract, it is commonly ignored in professional discourse and doctrine. This article explains the basic notion of organizational loyalty and identifies some mistaken tendencies in discourse and doctrine, especially the Managerialist Fallacy that leads lawyers to conflate the client organization with its senior managers. The article then applies the basic notion to some hard cases, concluding with a critical appraisal of the rationale for confidentiality with organizational clients
State based model of long-term potentiation and synaptic tagging and capture
Recent data indicate that plasticity protocols have not only synapse-specific but also more widespread effects. In particular, in synaptic tagging and capture (STC), tagged synapses can capture plasticity-related proteins, synthesized in response to strong stimulation of other synapses. This leads to long-lasting modification of only weakly stimulated synapses. Here we present a biophysical model of synaptic plasticity in the hippocampus that incorporates several key results from experiments on STC. The model specifies a set of physical states in which a synapse can exist, together with transition rates that are affected by high- and low-frequency stimulation protocols. In contrast to most standard plasticity models, the model exhibits both early- and late-phase LTP/D, de-potentiation, and STC. As such, it provides a useful starting point for further theoretical work on the role of STC in learning and memory
Roughness of molecular property landscapes and its impact on modellability
In molecular discovery and drug design, structure-property relationships and
activity landscapes are often qualitatively or quantitatively analyzed to guide
the navigation of chemical space. The roughness (or smoothness) of these
molecular property landscapes is one of their most studied geometric
attributes, as it can characterize the presence of activity cliffs, with
rougher landscapes generally expected to pose tougher optimization challenges.
Here, we introduce a general, quantitative measure for describing the roughness
of molecular property landscapes. The proposed roughness index (ROGI) is
loosely inspired by the concept of fractal dimension and strongly correlates
with the out-of-sample error achieved by machine learning models on numerous
regression tasks.Comment: 17 pages, 6 figures, 2 tables (SI with 17 pages, 16 figures
Interactions of Bacillus Mojavensis and Fusarium Verticillioides With a Benzoxazolinone (Boa) and Its Transformation Product, Apo
En:Journal of Chemical Ecology (2007, vol. 33, n. 10, p. 1885-1897)The benzoxazolinones, specifically benzoxazolin-2(3H)-one (BOA), are important transformation products of the benzoxazinones that can serve as allelochemicals providing resistance to maize from pathogenic bacteria, fungi, and insects. However, maize pathogens such as Fusarium verticillioides are capable of detoxifying the benzoxazolinones to 2-aminophenol (AP), which is converted to the less toxic N-(2-hydroxyphenyl) malonamic acid (HPMA) and 2-acetamidophenol (HPAA). As biocontrol strategies that utilize a species of endophytic bacterium, Bacillus mojavensis, are considered efficacious as a control of this Fusarium species, the in vitro transformation and effects of BOA on growth of this bacterium was examined relative to its interaction with strains of F. verticillioides. The results showed that a red pigment was produced and accumulated only on BOA-amended media when wild type and the progeny of genetic crosses of F. verticillioides are cultured in the presence of the bacterium. The pigment was identified as 2-amino-3H-phenoxazin-3-one (APO), which is a stable product. The results indicate that the bacterium interacts with the fungus preventing the usual transformation of AP to the nontoxic HPMA, resulting in the accumulation of higher amounts of APO than when the fungus is cultured alone. APO is highly toxic to F. verticillioides and other organisms. Thus, an enhanced biocontrol is suggested by this in vitro study.
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