Détermination des niches écologiques du phytoplancton à partir de données in situ du lac Montjoie

Le rôle central du phytoplancton à la base de la chaîne trophique aquatique motive une compréhension étayée des facteurs pouvant faire varier les populations et la composition des populations de phytoplancton. Cette compréhension est d'autant plus importante dans le contexte actuel, puisque nous savons que l'humain influence le climat et les milieux aquatiques par sa présence et ses activités. Nous tentons donc, dans notre étude, de déterminer les variables environnementales importantes qui dictent les changements de taille et de composition de la communauté de phytoplancton à l'échelle d'un lac et d'en déduire les niches réalisées des différentes espèces du lac. L'utilisation d'une station mobile de manière verticale dans le lac Montjoie (Saint-Denis-de-Brompton) a permis de collecter des données in situ à haute fréquence et résolution temporelle caractérisant la colonne d'eau. Combinée à ces mesures, une banque de données sur l'abondance de différentes catégories de phytoplancton a été créée à l'aide d'un cytomètre en flux imageur (IFCB) et d'un programme de reconnaissance d'images qui lui est associé. En combinant ces données nous avons déterminé que la température moyenne au-dessus de la thermocline et que la profondeur limite de chlorophylle (2 écarts-types sous le maximum de chlorophylle) étaient les 2 variables (parmi les variables mesurées) les plus appropriées pour déterminer les niches réalisées de nos catégories de phytoplancton. À l'aide de ces 2 variables, nous avons pu déterminer les niches réalisées d'une trentaine de catégories présentes dans notre lac. Les niches ont été déterminées à la fois sur les données d'abondance et sur les données de taux de croissance nette à l'aide de deux méthodes différentes, soit l'analyse canonique des correspondances (CCA) et la maximisation de l'entropie d'information (MaxEnt). Ce sont finalement les niches déterminées avec les taux de croissance nette qui sont les plus pertinentes. Les deux méthodes ont donné des résultats semblables, mais c'est MaxEnt qui est la plus versatile pour l'ajout de nouvelles variables explicatives et c'est donc celle-ci que nous privilégierons dans le futur

Détermination des niches écologiques du phytoplancton à partir de données in situ du lac Montjoie

Le rôle central du phytoplancton à la base de la chaîne trophique aquatique motive une compréhension étayée des facteurs pouvant faire varier les populations et la composition des populations de phytoplancton. Cette compréhension est d'autant plus importante dans le contexte actuel, puisque nous savons que l'humain influence le climat et les milieux aquatiques par sa présence et ses activités. Nous tentons donc, dans notre étude, de déterminer les variables environnementales importantes qui dictent les changements de taille et de composition de la communauté de phytoplancton à l'échelle d'un lac et d'en déduire les niches réalisées des différentes espèces du lac. L'utilisation d'une station mobile de manière verticale dans le lac Montjoie (Saint-Denis-de-Brompton) a permis de collecter des données in situ à haute fréquence et résolution temporelle caractérisant la colonne d'eau. Combinée à ces mesures, une banque de données sur l'abondance de différentes catégories de phytoplancton a été créée à l'aide d'un cytomètre en flux imageur (IFCB) et d'un programme de reconnaissance d'images qui lui est associé. En combinant ces données nous avons déterminé que la température moyenne au-dessus de la thermocline et que la profondeur limite de chlorophylle (2 écarts-types sous le maximum de chlorophylle) étaient les 2 variables (parmi les variables mesurées) les plus appropriées pour déterminer les niches réalisées de nos catégories de phytoplancton. À l'aide de ces 2 variables, nous avons pu déterminer les niches réalisées d'une trentaine de catégories présentes dans notre lac. Les niches ont été déterminées à la fois sur les données d'abondance et sur les données de taux de croissance nette à l'aide de deux méthodes différentes, soit l'analyse canonique des correspondances (CCA) et la maximisation de l'entropie d'information (MaxEnt). Ce sont finalement les niches déterminées avec les taux de croissance nette qui sont les plus pertinentes. Les deux méthodes ont donné des résultats semblables, mais c'est MaxEnt qui est la plus versatile pour l'ajout de nouvelles variables explicatives et c'est donc celle-ci que nous privilégierons dans le futur

Assessing soil carbon dynamics following mechanical site preparation in boreal lichen woodlands of Québec, Canada

Soil scarification is a common soil mechanical preparation (MSP) method in forestry aimed to enhance the success of reforestation. However, by turning over and displacing the humus (forming a mound; M), and producing furrows of bare mineral soil (F), it is believed that this method has a substantial effect on soil C stocks. Here, we assessed the influence of this MSP on soil C stocks in two boreal lichen woodlands (LWs) in Québec, Canada, scarified ten and two years before sampling (2012 and 2020 sites, respectively). Carbon stocks averaged 11.8–15.4 kg C m−2 in the undisturbed section of the LWs (IF) with 9–15 % located in the vegetation, 36–42 % in the humus and 42–55 % in the mineral soil (0–30 cm). MSP caused a C concentration decline of ∼105 g C kg−1 in the displaced humus. Unexpectedly, this decrease was similar at both sites, suggesting that most C losses from this horizon occurred within two years. Higher C stock in the mineral horizons of the M than of the IF compartment at the 2012 site, suggests that a fraction of the C lost from the displaced humus may not have been released to the atmosphere but rather translocated to the underlying mineral soil. However, no such phenomenon was detected at the 2020 site, where a net C loss from the mineral soil was observed. Overall, the use of mass balance equations did not show evidence of net C losses at the scale of the whole profile in the disturbed sections of both LWs following MSP. This was partly due to site heterogeneity and a sampling bias, but also to mechanisms such as C translocation from the organic to the mineral soil horizons, and the replenishment of the soil C pool owing to natural regeneration occurring at the surface of the furrows. Overall, this study suggests that MSP may not have as strong an impact on soil C stocks as previously believed. Additionally, it highlights the challenges associated with estimating C changes in the soil following MSP and discusses ways to improve the assessment of C dynamics in such heterogeneous habitats

Additional carbon sequestration potential of abandoned agricultural land afforestation in the boreal zone: a modelling approach

Agricultural land abandonment is a widespread phenomenon that generally results in C accumulation due to natural establishment of woody vegetation. However, whether afforestation of abandoned agricultural lands (AAL) can sequester more C than AAL naturally reverting to woodlands is unclear. In this study, we used the CBM-CFS3 model to compare the additional C sequestration potential of afforested AAL (AR) with a reference scenario where AAL naturally returns to forest (NR). Simulations were performed for stands located in Quebec’s boreal zone (Canada) on podzolic soils. The AR scenario corresponded to stands afforested at a density of 2000 trees ha-1 with one of five commonly planted species in the region, namely black spruce (BS), white spruce (WS), eastern white pine (EWP), jack pine (JP) and tamarack (TK). The NR scenario corresponded to stands naturally reverting to natural forests of one of five species naturally occurring in the region, namely BS, WS, balsam fir (BF), trembling aspen (TA) and white birch (WB). The yield tables used for NR were phased out by 5, 10, 15 and 20 years to simulate various dynamics of colonization by woody plants following agricultural abandonment. Net C accumulation in AR stands varies depending on the planted species, from 127 to 255 Mg C ha-1 after 100 years with TK and WS, respectively. Net C accumulation in NR stands after 100 years ranges from 82 to 145 Mg C ha-1 for BS and TA, respectively, but these values are sensitive to both tree density and colonization time following abandonment. In both scenarios, the soil C pool shrinks by 6 to 12 Mg C ha-1 over the first 80-85 years, but the following soil C stock replenishment is faster in AR than in NR stands due to higher litter production (up to 50 Mg C ha-1). The additional C sequestration potential of AAL afforestation, i.e. the difference in net C accumulation between AR and NR stands, is the highest in stands afforested with WS and reaches a peak of 121-175 Mg C ha-1 80-87 years after afforestation depending on the NR scenario. Afterwards, additional C sequestration decreases due to a reduction in plantation growth combined with increasing natural regeneration growth. This modelling approach helps predict AAL additional C sequestration potential and suggests that AAL afforestation yields a more rapid C sequestration than natural regeneration, which could contribute to reaching net-zero emissions by 2050

Human adipose-derived stromal cells for the production of completely autologous self-assembled tissue-engineered vascular substitutes

There is a clinical need for small-diameter vascular substitutes, notably for coronary and peripheral artery bypass procedures since these surgeries are limited by the availability of grafting material. This study reports the characterization of a novel autologous tissue-engineered vascular substitute (TEVS) produced in 10weeks exclusively from human adipose-derived stromal cells (ASC) self-assembly, and its comparison to an established model made from dermal fibroblasts (DF). Briefly, ASC and DF were cultured with ascorbate to form cell sheets subsequently rolled around a mandrel. These TEVS were further cultured as a maturation period before undergoing mechanical testing, histological analyses and endothelialization. No significant differences were measured in burst pressure, suture strength, failure load, elastic modulus and failure strain according to the cell type used to produce the TEVS. Indeed, ASC- and DF-TEVS both displayed burst pressures well above maximal physiological blood pressure. However, ASC-TEVS were 1.40-fold more compliant than DF-TEVS. The structural matrix, comprising collagens type I and III, fibronectin and elastin, was very similar in all TEVS although histological analysis showed a wavier and less dense collagen matrix in ASC-TEVS. This difference in collagen organization could explain their higher compliance. Finally, human umbilical vein endothelial cells (HUVEC) successfully formed a confluent endothelium on ASC and DF cell sheets, as well as inside ASC-TEVS. Our results demonstrated that ASC are an alternative cell source for the production of TEVS displaying good mechanical properties and appropriate endothelialization

A framework for Pb-210 model selection and its application to 37 cores from Eastern Canada to identify the dynamics and drivers of lake sedimentation rates

Lake sedimentation rate represents a synthetic metric of ecosystem functioning. Many localized studies have reported a significant association between land use/land cover changes and lake sediment mass accumulation rates, with a few global syntheses echoing these findings at larger scales. In the literature, studies evaluating lead-210 (Pb-210) for establishing sediment chronologies will report at least one of three dating models, but the constant rate of supply (CRS) model is the most widely used. However, it is often unclear how or why this model is selected, despite its influence on the interpretation of many subsequent analyses about ecosystem dynamics and functioning. It would thus be advantageous to design an objective and semi-automated way of choosing among dating models. We measured radioisotopic activities in 37 sediment cores across four ecozones of Eastern Canada and developed an approach to assess model fit for the three commonly applied dating models. The derived chronologies were then used to evaluate the spatial and temporal variation in sedimentation rates across four ecozones in Canada (covering a surface area of 2.2 x 10(6) km(2)). We observed a recent increase in lake sedimentation rates across most lakes, as has been observed globally, albeit with significant differences in the magnitude of sedimentation rates across ecozones. Across all lakes, we found that regional human population counts and mean annual air temperatures were significant temporal predictors of variation in mass accumulation rates. Overall, this analytical framework offers an objective approach for assessing fit and selecting among sediment age models, which contributes to a more robust quantification of sedimentation rates. With this first application, we provide a quantitative assessment of how lake sedimentation rates have varied across a northern lake-rich region and have responded to environmental change

Human epithelial stem cells persist within tissue-engineered skin produced by the self-assembly approach

To adequately and permanently restore organ function after grafting, human tissue-engineered skin substitutes (TESs) must ultimately contain and preserve functional epithelial stem cells (SCs). It is therefore essential that a maximum of SCs be preserved during each in vitro step leading to the production of TESs such as the culture process and the elaboration of a skin cell bank by cryopreservation. To investigate the presence and functionality of epithelial SCs within the human TESs made by the self-assembly approach, slow-cycling cells were identified using 5′-bromo-2′-deoxyuridine (BrdU) in the three-dimensional construct. A subset of basal epithelial cells retained the BrdU label and was positive for the SC-associated marker keratin 19 within TESs after a chase of 21 days in culture post-BrdU labeling. Moreover, keratinocytes harvested from TESs gave rise to SC-like colonies in secondary monolayer subcultures, indicating that SCs were preserved within TESs. To evaluate the effect of cryopreservation with dimethyl sulfoxide and storage in liquid nitrogen on SCs, human epithelial cells were extracted from skin samples, amplified in culture, and used to produce TESs, before cryopreservation as well as after thawing. We found that the proportion and the growth potential of epithelial SCs in monolayer culture and in TESs remained constant before and after cryopreservation. Further, the functionality of these substitutes was demonstrated by successfully grafting human TESs on athymic mice for 6 months. We conclude that human epithelial skin SCs are adequately preserved upon human tissue reconstruction. Thus, these TESs produced by the self-assembly approach are suitable for clinical applications