The SAGA Survey: I. Satellite Galaxy Populations Around Eight Milky Way Analogs

We present the survey strategy and early results of the "Satellites Around Galactic Analogs" (SAGA) Survey. The SAGA Survey's goal is to measure the distribution of satellite galaxies around 100 systems analogous to the Milky Way down to the luminosity of the Leo I dwarf galaxy ($M_r < -12.3$). We define a Milky Way analog based on $K$-band luminosity and local environment. Here, we present satellite luminosity functions for 8 Milky Way analog galaxies between 20 to 40 Mpc. These systems have nearly complete spectroscopic coverage of candidate satellites within the projected host virial radius down to $r_o < 20.75$ using low redshift $gri$ color criteria. We have discovered a total of 25 new satellite galaxies: 14 new satellite galaxies meet our formal criteria around our complete host systems, plus 11 additional satellites in either incompletely surveyed hosts or below our formal magnitude limit. Combined with 13 previously known satellites, there are a total of 27 satellites around 8 complete Milky Way analog hosts. We find a wide distribution in the number of satellites per host, from 1 to 9, in the luminosity range for which there are five Milky Way satellites. Standard abundance matching extrapolated from higher luminosities predicts less scatter between hosts and a steeper luminosity function slope than observed. We find that the majority of satellites (26 of 27) are star-forming. These early results indicate that the Milky Way has a different satellite population than typical in our sample, potentially changing the physical interpretation of measurements based only on the Milky Way's satellite galaxies.Comment: 22 pages, 19 figures, 2 tables. Updated to published version. Survey website: http://sagasurvey.org

Creating nuclear spin entanglement using an optical degree of freedom

Molecular nanostructures are promising building blocks for future quantum technologies, provided methods of harnessing their multiple degrees of freedom can be identified and implemented. Due to low decoherence rates nuclear spins are considered ideal candidates for storing quantum information while optical excitations can give rise to fast and controllable interactions for information processing. A recent paper (Physical Review Letters \textbf{104} 200501) proposed a method for entangling two nuclear spins through their mutual coupling to a transient optically excited electron spin. Building on the same idea, we here present an extended and much more detailed theoretical framework, showing that this method is in fact applicable to a much wider class of molecular structures than previously discussed in the original proposal

Does specialist physician supply affect pediatric asthma health outcomes?

Background Pediatrician and pediatric subspecialist density varies substantially among the various Canadian provinces, as well as among various states in the US. It is unknown whether this variability impacts health outcomes. To study this knowledge gap, we evaluated pediatric asthma admission rates within the 2 Canadian provinces of Manitoba and Saskatchewan, which have similarly sized pediatric populations and substantially different physician densities. Methods This was a retrospective cross-sectional cohort study. Health regions defined by the provincial governments, have, in turn, been classified into peer groups by Statistics Canada, on the basis of common socio-economic characteristics and socio-demographic determinants of health. To study the relationship between the distribution of the pediatric workforce and health outcomes in Canadian children, asthma admission rates within comparable peer group regions in both provinces were examined by combining multiple national and provincial health databases. We generated physician density maps for general practitioners, and general pediatricians practicing in Manitoba and Saskatchewan in 2011. Results At the provincial level, Manitoba had 48.6 pediatricians/100,000 child population, compared to 23.5/100,000 in Saskatchewan. There were 3.1 pediatric asthma specialists/100,000 child population in Manitoba and 1.4/100,000 in Saskatchewan. Among peer-group A, the differences were even more striking. A significantly higher number of patients were admitted in Saskatchewan (590.3/100,000 children) compared to Manitoba (309.3/100,000, p \u3c 0.0001). Conclusions Saskatchewan, which has a lower pediatrician and pediatric asthma specialist supply, had a higher asthma admission rate than Manitoba. Our data suggest that there is an inverse relationship between asthma admissions and pediatrician and asthma specialist supply

A new conceptual approach for systematic error correction in CNC machine tools minimizing worst case prediction error

A new artifact-based method to identify the systematic errors in multi-axis CNC machine tools minimizing the worst case prediction error is presented. The closed loop volumetric error is identified by simultaneously moving the axes of the machine tool. The physical artifact is manufactured on the machine tool and later measured on a coordinate measuring machine. The artifact consists of a set of holes in the machine tool workspace at locations that minimize the worst case prediction error for a given bounded measurement error. The number of holes to be drilled depends on the degree of the polynomials used to model the systematic error and the number of axes of the machine tool. The prediction error is also function of the number and location of the holes. The feasibility of the method is first investigated for a two-axis machine to find the best experimental setting. Finally based on the two-axis case study, we extend the results to machine tools with any number of axes. The obtained results are very promising and require only a short time to produce the artifac

Helmholtz Open Science Workshop „Zugang zu und Nachnutzung von wissenschaftlicher Software“ #hgfos16, Report; November 2016

Der Report des Helmholtz Open Science Workshops „Zugang zu und Nachnutzung von wissenschaftlicher Software“ #hgfos16 behandelt die Themen Standards und Qualitätssicherung; Reproduzierbarkeit; Lizenzierung und weitere rechtliche Aspekte; Zitation und Anerkennung; Sichtbarkeit und Modularität; Geschäftsmodelle; Personal, Ausbildung, Karrierewege. Diese Themen sind eng miteinander verzahnt. Für jeden Themenbereich werden jeweils die Relevanz, Fragestellungen, Herausforderungen, mögliche Lösungsansätze und Handlungsempfehlungen betrachtet

Identification of rare-disease genes using blood transcriptome sequencing and large control cohorts.

It is estimated that 350 million individuals worldwide suffer from rare diseases, which are predominantly caused by mutation in a single gene1. The current molecular diagnostic rate is estimated at 50%, with whole-exome sequencing (WES) among the most successful approaches2-5. For patients in whom WES is uninformative, RNA sequencing (RNA-seq) has shown diagnostic utility in specific tissues and diseases6-8. This includes muscle biopsies from patients with undiagnosed rare muscle disorders6,9, and cultured fibroblasts from patients with mitochondrial disorders7. However, for many individuals, biopsies are not performed for clinical care, and tissues are difficult to access. We sought to assess the utility of RNA-seq from blood as a diagnostic tool for rare diseases of different pathophysiologies. We generated whole-blood RNA-seq from 94 individuals with undiagnosed rare diseases spanning 16 diverse disease categories. We developed a robust approach to compare data from these individuals with large sets of RNA-seq data for controls (n = 1,594 unrelated controls and n = 49 family members) and demonstrated the impacts of expression, splicing, gene and variant filtering strategies on disease gene identification. Across our cohort, we observed that RNA-seq yields a 7.5% diagnostic rate, and an additional 16.7% with improved candidate gene resolution

Does childhood trauma predict poorer metacognitive abilities in people with first-episode psychosis?

Research suggests that people with first-episode psychosis (FEP) report more childhood traumas and have lower metacognitive abilities than non-clinical controls. Childhood trauma negatively affects metacognitive development in population studies, while the association remains largely unexplored in FEP populations. Metacognition refers to the identification of thoughts and feelings and the formation of complex ideas about oneself and others. This study hypothesized that childhood trauma would be associated with lower metacognitive abilities in people with FEP. In a representative sample of 92 persons with non-affective FEP, we assessed childhood trauma, metacognitive abilities and symptoms of psychosis. We used the Childhood Trauma Questionnaire (CTQ) and the Metacognitive Assessment Scale––Abbreviated which includes Self-reflectivity, Awareness of the Mind of the Other, Decentration and Mastery. Hierarchical regression analyses were performed with metacognitive domains as outcome variables and childhood traumas as independent variables, while controlling for age, gender, first-degree psychiatric illness and negative symptoms. We found few significant associations between the different types of childhood trauma and metacognitive domains, and they suggested childhood trauma are associated with better metacognitive abilities. Study limitations included the cross-sectional design and use of self-report measures. Future studies could preferably be prospective and include different measures of psychopathology and neuropsychology

Wilms Tumor Chromatin Profiles Highlight Stem Cell Properties and a Renal Developmental Network

Wilms tumor is the most common pediatric kidney cancer. To identify transcriptional and epigenetic mechanisms that drive this disease, we compared genome-wide chromatin profiles of Wilms tumors, embryonic stem cells (ESCs), and normal kidney. Wilms tumors prominently exhibit large active chromatin domains previously observed in ESCs. In the cancer, these domains frequently correspond to genes that are critical for kidney development and expressed in the renal stem cell compartment. Wilms cells also express “embryonic” chromatin regulators and maintain stem cell-like p16 silencing. Finally, Wilms and ESCs both exhibit “bivalent” chromatin modifications at silent promoters that may be poised for activation. In Wilms tumor, bivalent promoters correlate to genes expressed in specific kidney compartments and point to a kidney-specific differentiation program arrested at an early-progenitor stage. We suggest that Wilms cells share a transcriptional and epigenetic landscape with a normal renal stem cell, which is inherently susceptible to transformation and may represent a cell of origin for this disease